RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	ATP5G1	P05496	136 aa		17.15	■□□□□ 0.34
CNOT7-204	ENST00000518885	ATP5G3	P48201	142 aa		17.15	■□□□□ 0.34
CNOT7-204	ENST00000518885	FAM74A1	Q5RGS3	127 aa		17.15	■□□□□ 0.34
CNOT7-204	ENST00000518885	C15orf53	Q8NAA6	179 aa		17.15	■□□□□ 0.34
CNOT7-204	ENST00000518885	INO80E	Q8NBZ0	244 aa	Predicted RBP	17.15	■□□□□ 0.34
CNOT7-204	ENST00000518885	AQP10	Q96PS8	301 aa		17.15	■□□□□ 0.34
CNOT7-204	ENST00000518885	PLAC8L1	A1L4L8	177 aa		17.14	■□□□□ 0.33
CNOT7-204	ENST00000518885	C7orf71	A4D174	169 aa		17.14	■□□□□ 0.33
CNOT7-204	ENST00000518885	ERCC8	Q13216	396 aa		17.14	■□□□□ 0.33
CNOT7-204	ENST00000518885	PQLC2	Q6ZP29	291 aa		17.14	■□□□□ 0.33
CNOT7-204	ENST00000518885	UBE2DNL	Q8IWF7	75 aa		17.14	■□□□□ 0.33
CNOT7-204	ENST00000518885	POM121L12	Q8N7R1	296 aa		17.14	■□□□□ 0.33
CNOT7-204	ENST00000518885	RXFP4	Q8TDU9	374 aa		17.14	■□□□□ 0.33
CNOT7-204	ENST00000518885	AGPAT4-IT1	Q9H0P7	198 aa		17.14	■□□□□ 0.33
CNOT7-204	ENST00000518885	KMT2A	Q03164	3969 aa		17.13	■□□□□ 0.33
CNOT7-204	ENST00000518885	GPX1	P07203	203 aa		17.13	■□□□□ 0.33
CNOT7-204	ENST00000518885	RAN	P62826	216 aa	Known RBP	17.13	■□□□□ 0.33
CNOT7-204	ENST00000518885	ZNF680	Q8NEM1	530 aa		17.13	■□□□□ 0.33
CNOT7-204	ENST00000518885	PHYHIPL	Q96FC7	376 aa		17.13	■□□□□ 0.33
CNOT7-204	ENST00000518885	WFDC1	Q9HC57	220 aa		17.13	■□□□□ 0.33
CNOT7-204	ENST00000518885	NOP10	Q9NPE3	64 aa	Known RBP	17.13	■□□□□ 0.33
CNOT7-204	ENST00000518885	TRBV7-9	A0A0J9YWB2	115 aa		17.12	■□□□□ 0.33
CNOT7-204	ENST00000518885	RBAKDN	A6NC62	111 aa		17.12	■□□□□ 0.33
CNOT7-204	ENST00000518885	KLLN	B2CW77	178 aa		17.12	■□□□□ 0.33
CNOT7-204	ENST00000518885	CRISP2	P16562	243 aa		17.12	■□□□□ 0.33
CNOT7-204	ENST00000518885	KIR3DS1	Q14943	382 aa		17.12	■□□□□ 0.33
CNOT7-204	ENST00000518885	TMEM88	Q6PEY1	159 aa		17.12	■□□□□ 0.33
CNOT7-204	ENST00000518885	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	17.11	■□□□□ 0.33
CNOT7-204	ENST00000518885	IGKV2D-40	P01614	121 aa	Predicted RBP	17.11	■□□□□ 0.33
CNOT7-204	ENST00000518885	MB	P02144	154 aa		17.11	■□□□□ 0.33
CNOT7-204	ENST00000518885	ZNF138	P52744	262 aa		17.11	■□□□□ 0.33
CNOT7-204	ENST00000518885	OR10G4	Q8NGN3	311 aa		17.11	■□□□□ 0.33
CNOT7-204	ENST00000518885	OR10G9	Q8NGN4	311 aa		17.11	■□□□□ 0.33
CNOT7-204	ENST00000518885	OR10G7	Q8NGN6	311 aa		17.11	■□□□□ 0.33
CNOT7-204	ENST00000518885	FAM19A4	Q96LR4	140 aa		17.11	■□□□□ 0.33
CNOT7-204	ENST00000518885		Q9H3A6	140 aa		17.11	■□□□□ 0.33
CNOT7-204	ENST00000518885	EPPK1	P58107	5090 aa	Known RBP	17.1	■□□□□ 0.33
CNOT7-204	ENST00000518885		F5H768	121 aa		17.1	■□□□□ 0.33
CNOT7-204	ENST00000518885	RNASE4	P34096	147 aa	Known RBP	17.1	■□□□□ 0.33
CNOT7-204	ENST00000518885	CMTM2	Q8TAZ6	248 aa		17.1	■□□□□ 0.33
CNOT7-204	ENST00000518885	LINC00467	Q9BRT7	94 aa		17.1	■□□□□ 0.33
CNOT7-204	ENST00000518885	PSMG3	Q9BT73	122 aa	Predicted RBP	17.1	■□□□□ 0.33
CNOT7-204	ENST00000518885	ZNF492	Q9P255	531 aa		17.1	■□□□□ 0.33
CNOT7-204	ENST00000518885	RNF212	Q495C1	297 aa		17.09	■□□□□ 0.33
CNOT7-204	ENST00000518885	OR2G3	Q8NGZ4	309 aa		17.09	■□□□□ 0.33
CNOT7-204	ENST00000518885	SERF2	P84101	59 aa		17.08	■□□□□ 0.32
CNOT7-204	ENST00000518885	EIF4E3	Q8N5X7	224 aa	Known RBP	17.08	■□□□□ 0.32
CNOT7-204	ENST00000518885	HSD17B11	Q8NBQ5	300 aa		17.08	■□□□□ 0.32
CNOT7-204	ENST00000518885	ZNF503	Q96F45	646 aa		17.08	■□□□□ 0.32
CNOT7-204	ENST00000518885	VGLL1	Q99990	258 aa		17.08	■□□□□ 0.32
CNOT7-204	ENST00000518885	OTOR	Q9NRC9	128 aa		17.08	■□□□□ 0.32
CNOT7-204	ENST00000518885	BORCS7-ASMT	A0A0B4J1R7	106 aa		17.07	■□□□□ 0.32
CNOT7-204	ENST00000518885	RAB2A	P61019	212 aa		17.07	■□□□□ 0.32
CNOT7-204	ENST00000518885	DAZ2	Q13117	558 aa	Known RBP	17.07	■□□□□ 0.32
CNOT7-204	ENST00000518885	BTN1A1	Q13410	526 aa		17.07	■□□□□ 0.32
CNOT7-204	ENST00000518885	ARL6IP6	Q8N6S5	226 aa		17.07	■□□□□ 0.32
CNOT7-204	ENST00000518885	LENEP	Q9Y5L5	61 aa		17.07	■□□□□ 0.32
CNOT7-204	ENST00000518885	RGS13	O14921	159 aa		17.06	■□□□□ 0.32
CNOT7-204	ENST00000518885	CDC34	P49427	236 aa	Predicted RBP	17.06	■□□□□ 0.32
CNOT7-204	ENST00000518885	ANXA2R	Q3ZCQ2	193 aa		17.06	■□□□□ 0.32
CNOT7-204	ENST00000518885	OR2T35	Q8NGX2	323 aa		17.06	■□□□□ 0.32
CNOT7-204	ENST00000518885	GNPNAT1	Q96EK6	184 aa	Predicted RBP	17.06	■□□□□ 0.32
CNOT7-204	ENST00000518885	FXYD6-FXYD2	A0A087WZ82	144 aa		17.05	■□□□□ 0.32
CNOT7-204	ENST00000518885	ZNF324	O75467	553 aa	Predicted RBP	17.05	■□□□□ 0.32
CNOT7-204	ENST00000518885	FAM3B	P58499	235 aa	Predicted RBP	17.05	■□□□□ 0.32
CNOT7-204	ENST00000518885	CD300C	Q08708	224 aa		17.05	■□□□□ 0.32
CNOT7-204	ENST00000518885	TMED6	Q8WW62	240 aa		17.05	■□□□□ 0.32
CNOT7-204	ENST00000518885	HYLS1	Q96M11	299 aa		17.05	■□□□□ 0.32
CNOT7-204	ENST00000518885	ATG101	Q9BSB4	218 aa		17.05	■□□□□ 0.32
CNOT7-204	ENST00000518885	VPS13D	Q5THJ4	4388 aa		17.05	■□□□□ 0.32
CNOT7-204	ENST00000518885	DIRC3	C9JPN6	131 aa		17.04	■□□□□ 0.32
CNOT7-204	ENST00000518885	ARPC5L	Q9BPX5	153 aa		17.04	■□□□□ 0.32
CNOT7-204	ENST00000518885	GAGE12B	A1L429	117 aa		17.03	■□□□□ 0.32
CNOT7-204	ENST00000518885	PGP	A6NDG6	321 aa		17.03	■□□□□ 0.32
CNOT7-204	ENST00000518885	GAGE7	O76087	117 aa		17.03	■□□□□ 0.32
CNOT7-204	ENST00000518885	GAGE12F	P0CL80	117 aa		17.03	■□□□□ 0.32
CNOT7-204	ENST00000518885	GAGE12G	P0CL81	117 aa		17.03	■□□□□ 0.32
CNOT7-204	ENST00000518885	GAGE12I	P0CL82	117 aa		17.03	■□□□□ 0.32
CNOT7-204	ENST00000518885	ATP6V0C	P27449	155 aa		17.03	■□□□□ 0.32
CNOT7-204	ENST00000518885	IBA57	Q5T440	356 aa	Known RBP	17.03	■□□□□ 0.32
CNOT7-204	ENST00000518885	ZFAND2A	Q8N6M9	145 aa		17.03	■□□□□ 0.32
CNOT7-204	ENST00000518885	LINC00612	Q8N6U2	182 aa		17.03	■□□□□ 0.32
CNOT7-204	ENST00000518885	TNFSF18	Q9UNG2	199 aa		17.03	■□□□□ 0.32
CNOT7-204	ENST00000518885	IGHV1OR15-1	A0A075B7D0	117 aa		17.01	■□□□□ 0.31
CNOT7-204	ENST00000518885	NUDT3	O95989	172 aa		17.01	■□□□□ 0.31
CNOT7-204	ENST00000518885		Q8TAT8	98 aa		17.01	■□□□□ 0.31
CNOT7-204	ENST00000518885	ACTR3C	Q9C0K3	210 aa	Predicted RBP	17.01	■□□□□ 0.31
CNOT7-204	ENST00000518885	TRGV2	A0A075B6R0	118 aa		17	■□□□□ 0.31
CNOT7-204	ENST00000518885	SERTM2	A0A1B0GWG4	89 aa		17	■□□□□ 0.31
CNOT7-204	ENST00000518885	STAG3L2	P0CL84	134 aa		17	■□□□□ 0.31
CNOT7-204	ENST00000518885	STAG3L3	P0CL85	134 aa		17	■□□□□ 0.31
CNOT7-204	ENST00000518885	ARL14EPL	P0DKL9	152 aa		17	■□□□□ 0.31
CNOT7-204	ENST00000518885	OR5I1	Q13606	314 aa		17	■□□□□ 0.31
CNOT7-204	ENST00000518885		Q5BKY6	102 aa		17	■□□□□ 0.31
CNOT7-204	ENST00000518885	GSN-AS1	Q9NRJ2	163 aa		17	■□□□□ 0.31
CNOT7-204	ENST00000518885	RPH3AL	Q9UNE2	315 aa		17	■□□□□ 0.31
CNOT7-204	ENST00000518885		K7EQM0	130 aa		16.99	■□□□□ 0.31
CNOT7-204	ENST00000518885	TAAR5	O14804	337 aa		16.99	■□□□□ 0.31
CNOT7-204	ENST00000518885	HMGB3	O15347	200 aa	Known RBP	16.99	■□□□□ 0.31
CNOT7-204	ENST00000518885	CXorf1	O96002	111 aa		16.99	■□□□□ 0.31

Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms