RNA–Protein interactions for RNA: ENST00000518451.1

HOXA3-203, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 541 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-203ENST00000518451 LGALS9BQ3B8N2 356 aa13.08□□□□□ -0.32
HOXA3-203ENST00000518451 FFAR4Q5NUL3 377 aa13.08□□□□□ -0.32
HOXA3-203ENST00000518451 LYPD1Q8N2G4 141 aa13.08□□□□□ -0.32
HOXA3-203ENST00000518451 MBD2Q9UBB5 411 aa13.08□□□□□ -0.32
HOXA3-203ENST00000518451 C7orf71A4D174 169 aa13.07□□□□□ -0.32
HOXA3-203ENST00000518451 PTTG1O95997 202 aa13.07□□□□□ -0.32
HOXA3-203ENST00000518451 GPX1P07203 203 aa13.07□□□□□ -0.32
HOXA3-203ENST00000518451 FAM122CQ6P4D5 195 aa13.07□□□□□ -0.32
HOXA3-203ENST00000518451 FXYD5Q96DB9 178 aa13.07□□□□□ -0.32
HOXA3-203ENST00000518451 ATG101Q9BSB4 218 aa13.07□□□□□ -0.32
HOXA3-203ENST00000518451 SMIM3Q9BZL3 60 aa13.07□□□□□ -0.32
HOXA3-203ENST00000518451 KLLNB2CW77 178 aa13.06□□□□□ -0.32
HOXA3-203ENST00000518451 OR10J4P0C629 311 aa13.06□□□□□ -0.32
HOXA3-203ENST00000518451 KHDC3LQ587J8 217 aa13.06□□□□□ -0.32
HOXA3-203ENST00000518451 ZNF680Q8NEM1 530 aa13.06□□□□□ -0.32
HOXA3-203ENST00000518451 M0R2N4 97 aa13.05□□□□□ -0.32
HOXA3-203ENST00000518451 CRISP2P16562 243 aa13.05□□□□□ -0.32
HOXA3-203ENST00000518451 RNASE4P34096 147 aaKnown RBP13.05□□□□□ -0.32
HOXA3-203ENST00000518451 RANP62826 216 aaKnown RBP13.05□□□□□ -0.32
HOXA3-203ENST00000518451 DAZ2Q13117 558 aaKnown RBP13.05□□□□□ -0.32
HOXA3-203ENST00000518451 FAM19A4Q96LR4 140 aa13.05□□□□□ -0.32
HOXA3-203ENST00000518451 LINC00467Q9BRT7 94 aa13.05□□□□□ -0.32
HOXA3-203ENST00000518451 ALG5Q9Y673 324 aa13.05□□□□□ -0.32
HOXA3-203ENST00000518451 TRBV7-9A0A0J9YWB2 115 aa13.04□□□□□ -0.32
HOXA3-203ENST00000518451 A0A1W2PPV4 95 aa13.04□□□□□ -0.32
HOXA3-203ENST00000518451 ZNF324O75467 553 aaPredicted RBP13.04□□□□□ -0.32
HOXA3-203ENST00000518451 NUDT3O95989 172 aa13.04□□□□□ -0.32
HOXA3-203ENST00000518451 UBE2L3P68036 154 aaKnown RBP13.04□□□□□ -0.32
HOXA3-203ENST00000518451 ACOT6Q3I5F7 207 aaPredicted RBP13.04□□□□□ -0.32
HOXA3-203ENST00000518451 EIF4E3Q8N5X7 224 aaKnown RBP13.04□□□□□ -0.32
HOXA3-203ENST00000518451 LINC00612Q8N6U2 182 aa13.04□□□□□ -0.32
HOXA3-203ENST00000518451 RXFP4Q8TDU9 374 aa13.04□□□□□ -0.32
HOXA3-203ENST00000518451 MED28Q9H204 178 aa13.04□□□□□ -0.32
HOXA3-203ENST00000518451 ZNF492Q9P255 531 aa13.04□□□□□ -0.32
HOXA3-203ENST00000518451 IGKV2-40A0A087WW87 121 aaPredicted RBP13.03□□□□□ -0.32
HOXA3-203ENST00000518451 GAGE12BA1L429 117 aa13.03□□□□□ -0.32
HOXA3-203ENST00000518451 RBAKDNA6NC62 111 aa13.03□□□□□ -0.32
HOXA3-203ENST00000518451 GAGE7O76087 117 aa13.03□□□□□ -0.32
HOXA3-203ENST00000518451 IGKV2D-40P01614 121 aaPredicted RBP13.03□□□□□ -0.32
HOXA3-203ENST00000518451 GAGE12FP0CL80 117 aa13.03□□□□□ -0.32
HOXA3-203ENST00000518451 GAGE12GP0CL81 117 aa13.03□□□□□ -0.32
HOXA3-203ENST00000518451 GAGE12IP0CL82 117 aa13.03□□□□□ -0.32
HOXA3-203ENST00000518451 ZNF138P52744 262 aa13.03□□□□□ -0.32
HOXA3-203ENST00000518451 CCL18P55774 89 aa13.03□□□□□ -0.32
HOXA3-203ENST00000518451 OR5I1Q13606 314 aa13.03□□□□□ -0.32
HOXA3-203ENST00000518451 ANXA2RQ3ZCQ2 193 aa13.03□□□□□ -0.32
HOXA3-203ENST00000518451 SOHLH1Q5JUK2 328 aa13.03□□□□□ -0.32
HOXA3-203ENST00000518451 VGLL1Q99990 258 aa13.03□□□□□ -0.32
HOXA3-203ENST00000518451 M6PRP20645 277 aa13.02□□□□□ -0.33
HOXA3-203ENST00000518451 CD300CQ08708 224 aa13.02□□□□□ -0.33
HOXA3-203ENST00000518451 FAM74A1Q5RGS3 127 aa13.02□□□□□ -0.33
HOXA3-203ENST00000518451 PHYHIPLQ96FC7 376 aa13.02□□□□□ -0.33
HOXA3-203ENST00000518451 Q9H3A6 140 aa13.02□□□□□ -0.33
HOXA3-203ENST00000518451 IGLV2-18A0A075B6J9 118 aa13.01□□□□□ -0.33
HOXA3-203ENST00000518451 RGS13O14921 159 aa13.01□□□□□ -0.33
HOXA3-203ENST00000518451 BTN1A1Q13410 526 aa13.01□□□□□ -0.33
HOXA3-203ENST00000518451 ZNF266Q14584 549 aa13.01□□□□□ -0.33
HOXA3-203ENST00000518451 ASB13Q8WXK3 278 aa13.01□□□□□ -0.33
HOXA3-203ENST00000518451 GNPNAT1Q96EK6 184 aaPredicted RBP13.01□□□□□ -0.33
HOXA3-203ENST00000518451 ZNF503Q96F45 646 aa13.01□□□□□ -0.33
HOXA3-203ENST00000518451 WFDC1Q9HC57 220 aa13.01□□□□□ -0.33
HOXA3-203ENST00000518451 PQLC2Q6ZP29 291 aa13□□□□□ -0.33
HOXA3-203ENST00000518451 Q6ZR54 194 aa13□□□□□ -0.33
HOXA3-203ENST00000518451 ZFAND2AQ8N6M9 145 aa13□□□□□ -0.33
HOXA3-203ENST00000518451 CMTM2Q8TAZ6 248 aa13□□□□□ -0.33
HOXA3-203ENST00000518451 GSN-AS1Q9NRJ2 163 aa13□□□□□ -0.33
HOXA3-203ENST00000518451 LENEPQ9Y5L5 61 aa13□□□□□ -0.33
HOXA3-203ENST00000518451 TRGV2A0A075B6R0 118 aa12.99□□□□□ -0.33
HOXA3-203ENST00000518451 H3BNG1 76 aa12.99□□□□□ -0.33
HOXA3-203ENST00000518451 IBA57Q5T440 356 aaKnown RBP12.99□□□□□ -0.33
HOXA3-203ENST00000518451 DNAH10Q8IVF4 4471 aa12.99□□□□□ -0.33
HOXA3-203ENST00000518451 IGHV1OR15-1A0A075B7D0 117 aa12.98□□□□□ -0.33
HOXA3-203ENST00000518451 TRAV26-1A0A087WT03 109 aa12.98□□□□□ -0.33
HOXA3-203ENST00000518451 DIRC3C9JPN6 131 aa12.98□□□□□ -0.33
HOXA3-203ENST00000518451 Q6ZTI0 123 aa12.98□□□□□ -0.33
HOXA3-203ENST00000518451 ARL6IP6Q8N6S5 226 aa12.98□□□□□ -0.33
HOXA3-203ENST00000518451 C11orf72Q8NBR9 251 aa12.98□□□□□ -0.33
HOXA3-203ENST00000518451 OR10G4Q8NGN3 311 aa12.98□□□□□ -0.33
HOXA3-203ENST00000518451 OR10G9Q8NGN4 311 aa12.98□□□□□ -0.33
HOXA3-203ENST00000518451 OR10G7Q8NGN6 311 aa12.98□□□□□ -0.33
HOXA3-203ENST00000518451 C18orf15Q96N68 181 aa12.98□□□□□ -0.33
HOXA3-203ENST00000518451 AQP10Q96PS8 301 aa12.98□□□□□ -0.33
HOXA3-203ENST00000518451 ARPC5LQ9BPX5 153 aa12.98□□□□□ -0.33
HOXA3-203ENST00000518451 OTORQ9NRC9 128 aa12.98□□□□□ -0.33
HOXA3-203ENST00000518451 DNAH6Q9C0G6 4158 aa12.98□□□□□ -0.33
HOXA3-203ENST00000518451 FRAS1Q86XX4 4008 aa12.98□□□□□ -0.33
HOXA3-203ENST00000518451 PGPA6NDG6 321 aa12.97□□□□□ -0.33
HOXA3-203ENST00000518451 PRSS29PA6NIE9 313 aa12.97□□□□□ -0.33
HOXA3-203ENST00000518451 TMED6Q8WW62 240 aa12.97□□□□□ -0.33
HOXA3-203ENST00000518451 HYLS1Q96M11 299 aa12.97□□□□□ -0.33
HOXA3-203ENST00000518451 TRGV1A0A0A0MS02 117 aa12.96□□□□□ -0.33
HOXA3-203ENST00000518451 RTL8CO15255 209 aa12.96□□□□□ -0.33
HOXA3-203ENST00000518451 MBP02144 154 aa12.96□□□□□ -0.33
HOXA3-203ENST00000518451 TCL1AP56279 114 aa12.96□□□□□ -0.33
HOXA3-203ENST00000518451 SERF2P84101 59 aa12.96□□□□□ -0.33
HOXA3-203ENST00000518451 C1orf134Q5TEV5 83 aa12.96□□□□□ -0.33
HOXA3-203ENST00000518451 INO80EQ8NBZ0 244 aaPredicted RBP12.96□□□□□ -0.33
HOXA3-203ENST00000518451 Q8TAT8 98 aa12.96□□□□□ -0.33
HOXA3-203ENST00000518451 SPINK4O60575 86 aa12.95□□□□□ -0.34
HOXA3-203ENST00000518451 GIPP09681 153 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms