RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 BEX4Q9NWD9 120 aaPredicted RBP1.63□□□□□ -2.15
RNU1-40P-201ENST00000516816 MRPL16Q9NX20 251 aaKnown RBP1.63□□□□□ -2.15
RNU1-40P-201ENST00000516816 SPANXCQ9NY87 97 aa1.63□□□□□ -2.15
RNU1-40P-201ENST00000516816 FAM215AQ9Y5M1 114 aa1.63□□□□□ -2.15
RNU1-40P-201ENST00000516816 ARHGAP32A7KAX9 2087 aa1.63□□□□□ -2.15
RNU1-40P-201ENST00000516816 ARFGEF3Q5TH69 2177 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 IGLV11-55A0A075B6I3 123 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 IGHV4-4A0A075B6R2 117 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 TRAV8-1A0A0A6YYK1 113 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 TRAV12-1A0A0B4J245 112 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 TRAV40A0A0B4J280 105 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 IGHV1-69DA0A0B4J2H0 117 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 A0A1B0GWB2 263 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 GAGE12HA6NDE8 117 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 TMEM8BA6NDV4 472 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 LINC01546A6NGU7 62 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 CGB1A6NKQ9 187 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 A8MZ25 164 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 TEX22C9J3V5 150 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 E7EUB6 86 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 F8VRH5 84 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 LINC01619G3V211 115 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 LY6LH3BQJ8 138 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 H3BUA1 57 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 M0R381 172 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 NDUFA4O00483 81 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 SNAI2O43623 268 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 BUB3O43684 328 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 DUSP14O95147 198 aaKnown RBP1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 NDUFA3O95167 84 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 IGKV1-17P01599 117 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 TRGV3P03979 118 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 CTSGP08311 255 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 FRMD6-AS1P0C7T7 363 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 MED14OSP0DP75 135 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 EGR2P11161 476 aaPredicted RBP1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 RNASE4P34096 147 aaKnown RBP1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 EFNA4P52798 201 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 CMC4P56277 68 aaPredicted RBP1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 DSCR9P59020 149 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 SUMO2P61956 95 aaKnown RBP1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 FOXE3Q13461 319 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 EBI3Q14213 229 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 C15orf32Q32M92 178 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 C12orf74Q32Q52 190 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 FBXL19-AS1Q494R0 122 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 C5orf47Q569G3 176 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 KHDC1LQ5JSQ8 128 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 C10orf55Q5SWW7 151 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 FAM120AOSQ5T036 256 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 ZC2HC1BQ5TFG8 222 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 GDF5OSQ5U4N7 250 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 MORN5Q5VZ52 161 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 DGAT2L7PQ6IED9 249 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 PRSS57Q6UWY2 283 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 ZNF841Q6ZN19 808 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 C9orf47Q6ZRZ4 202 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 C9orf139Q6ZV77 190 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 Q6ZVH6 145 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 VMO1Q7Z5L0 202 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 GTSCR1Q86UQ5 136 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 DTX2Q86UW9 622 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 LRRC75A-AS1Q8N1F1 130 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 Q8N1Y9 231 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 TEX29Q8N6K0 151 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 Q8N976 141 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 FAM110DQ8TAY7 271 aaPredicted RBP1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 LINC01560Q8TB33 94 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 RNASE8Q8TDE3 154 aaKnown RBP1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 TMEM158Q8WZ71 300 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 DLX4Q92988 240 aaPredicted RBP1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 PLEKHB2Q96CS7 222 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 RITA1Q96K30 269 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 C8orf49Q96NF6 230 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 DUX5Q96PT3 197 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 SPAG8Q99932 426 aaPredicted RBP1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 FAM110AQ9BQ89 295 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 CHAC1Q9BUX1 264 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 TM2D2Q9BX73 214 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 PRO3102Q9H379 93 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 C7orf69Q9H7B7 122 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 NHP2Q9NX24 153 aaKnown RBP1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 ERG28Q9UKR5 140 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 UFC1Q9Y3C8 167 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 TNFRSF18Q9Y5U5 241 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 AGRNO00468 2067 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 FAM186AA6NE01 2351 aa1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 GOLGB1Q14789 3259 aaKnown RBP1.62□□□□□ -2.15
RNU1-40P-201ENST00000516816 POLEQ07864 2286 aa1.61□□□□□ -2.15
RNU1-40P-201ENST00000516816 COL27A1Q8IZC6 1860 aaPredicted RBP1.61□□□□□ -2.15
RNU1-40P-201ENST00000516816 CADP27708 2225 aa1.61□□□□□ -2.15
RNU1-40P-201ENST00000516816 TRBV25-1A0A075B6N4 114 aa1.61□□□□□ -2.15
RNU1-40P-201ENST00000516816 TRAV41A0A0B4J266 112 aa1.61□□□□□ -2.15
RNU1-40P-201ENST00000516816 A0A1W2PNU3 283 aaPredicted RBP1.61□□□□□ -2.15
RNU1-40P-201ENST00000516816 A0A1W2PRD5 423 aa1.61□□□□□ -2.15
RNU1-40P-201ENST00000516816 A0A1W2PRF3 423 aa1.61□□□□□ -2.15
RNU1-40P-201ENST00000516816 A0A1W2PRM7 423 aa1.61□□□□□ -2.15
RNU1-40P-201ENST00000516816 ZNF815PA8K554 130 aa1.61□□□□□ -2.15
RNU1-40P-201ENST00000516816 A8MWV9 139 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms