RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 FAM201AQ5SY85 155 aa10.02□□□□□ -0.81
SMAD1-215ENST00000515385 TEX36Q5VZQ5 186 aa10.02□□□□□ -0.81
SMAD1-215ENST00000515385 FAM216BQ8N7L0 139 aa10.02□□□□□ -0.81
SMAD1-215ENST00000515385 PRR25Q96S07 402 aa10.02□□□□□ -0.81
SMAD1-215ENST00000515385 PPDPFQ9H3Y8 114 aa10.02□□□□□ -0.81
SMAD1-215ENST00000515385 LOC107984156A0A0G2JMH3 177 aa10.02□□□□□ -0.81
SMAD1-215ENST00000515385 LINC01549A6NIU2 74 aa10.02□□□□□ -0.81
SMAD1-215ENST00000515385 FAM90A27PA6NNH2 459 aa10.02□□□□□ -0.81
SMAD1-215ENST00000515385 GAGE2BQ13066 116 aa10.02□□□□□ -0.81
SMAD1-215ENST00000515385 GAGE2EQ4V326 116 aa10.02□□□□□ -0.81
SMAD1-215ENST00000515385 ARL17AQ8IVW1 177 aa10.02□□□□□ -0.81
SMAD1-215ENST00000515385 CNEP1R1Q8N9A8 125 aa10.02□□□□□ -0.81
SMAD1-215ENST00000515385 ASCL2Q99929 193 aa10.02□□□□□ -0.81
SMAD1-215ENST00000515385 GAGE2DQ9UEU5 116 aa10.02□□□□□ -0.81
SMAD1-215ENST00000515385 IGHV3-21A0A0B4J1V1 117 aa10.01□□□□□ -0.81
SMAD1-215ENST00000515385 CCDC179H3BU77 68 aa10.01□□□□□ -0.81
SMAD1-215ENST00000515385 I3L2K1 104 aa10.01□□□□□ -0.81
SMAD1-215ENST00000515385 GLRXP35754 106 aa10.01□□□□□ -0.81
SMAD1-215ENST00000515385 CXCL12P48061 93 aa10.01□□□□□ -0.81
SMAD1-215ENST00000515385 TMEM78Q5T7P6 136 aa10.01□□□□□ -0.81
SMAD1-215ENST00000515385 SRSF8Q9BRL6 282 aaKnown RBP10.01□□□□□ -0.81
SMAD1-215ENST00000515385 TPSG1Q9NRR2 321 aa10.01□□□□□ -0.81
SMAD1-215ENST00000515385 DSCAML1Q8TD84 2053 aa10.01□□□□□ -0.81
SMAD1-215ENST00000515385 TNRC18O15417 2968 aaPredicted RBP10□□□□□ -0.81
SMAD1-215ENST00000515385 NDUFA3O95167 84 aa10□□□□□ -0.81
SMAD1-215ENST00000515385 IGKV1-17P01599 117 aa10□□□□□ -0.81
SMAD1-215ENST00000515385 LGALS1P09382 135 aaKnown RBP10□□□□□ -0.81
SMAD1-215ENST00000515385 MSMPQ1L6U9 139 aa10□□□□□ -0.81
SMAD1-215ENST00000515385 DEFB108BQ8NET1 73 aa10□□□□□ -0.81
SMAD1-215ENST00000515385 DNAJC30Q96LL9 226 aa10□□□□□ -0.81
SMAD1-215ENST00000515385 IGLV3-9A0A075B6K5 115 aa10□□□□□ -0.81
SMAD1-215ENST00000515385 M0R3E3 92 aa10□□□□□ -0.81
SMAD1-215ENST00000515385 IGHG3P01860 377 aa10□□□□□ -0.81
SMAD1-215ENST00000515385 CRYGBP07316 175 aa10□□□□□ -0.81
SMAD1-215ENST00000515385 TNFAIP6P98066 277 aaPredicted RBP10□□□□□ -0.81
SMAD1-215ENST00000515385 FBXL15Q9H469 300 aa10□□□□□ -0.81
SMAD1-215ENST00000515385 RAXQ9Y2V3 346 aa10□□□□□ -0.81
SMAD1-215ENST00000515385 DOCK7Q96N67 2140 aa9.99□□□□□ -0.81
SMAD1-215ENST00000515385 SNCGO76070 127 aa9.99□□□□□ -0.81
SMAD1-215ENST00000515385 IFITM1P13164 125 aa9.99□□□□□ -0.81
SMAD1-215ENST00000515385 LY6DQ14210 128 aa9.99□□□□□ -0.81
SMAD1-215ENST00000515385 DIAPH2-AS1Q14236 149 aa9.99□□□□□ -0.81
SMAD1-215ENST00000515385 RNF125Q96EQ8 232 aa9.99□□□□□ -0.81
SMAD1-215ENST00000515385 C3orf36Q3SXR2 165 aa9.98□□□□□ -0.81
SMAD1-215ENST00000515385 TTC32Q5I0X7 151 aa9.98□□□□□ -0.81
SMAD1-215ENST00000515385 ZNF491Q8N8L2 437 aa9.98□□□□□ -0.81
SMAD1-215ENST00000515385 PROCRQ9UNN8 238 aa9.98□□□□□ -0.81
SMAD1-215ENST00000515385 SLC25A15Q9Y619 301 aa9.98□□□□□ -0.81
SMAD1-215ENST00000515385 TEX22C9J3V5 150 aa9.98□□□□□ -0.81
SMAD1-215ENST00000515385 ENSAO43768 121 aaKnown RBP9.98□□□□□ -0.81
SMAD1-215ENST00000515385 SCGB1C2P0DMR2 95 aa9.98□□□□□ -0.81
SMAD1-215ENST00000515385 SLC25A16P16260 332 aa9.98□□□□□ -0.81
SMAD1-215ENST00000515385 ZFP2Q6ZN57 461 aa9.98□□□□□ -0.81
SMAD1-215ENST00000515385 DTX2Q86UW9 622 aa9.98□□□□□ -0.81
SMAD1-215ENST00000515385 SPRY4Q9C004 299 aa9.98□□□□□ -0.81
SMAD1-215ENST00000515385 SIGLEC9Q9Y336 463 aa9.98□□□□□ -0.81
SMAD1-215ENST00000515385 DOCK10Q96BY6 2186 aa9.97□□□□□ -0.81
SMAD1-215ENST00000515385 SMIM9A6NGZ8 99 aa9.97□□□□□ -0.81
SMAD1-215ENST00000515385 PCNX2A6NKB5 2137 aa9.97□□□□□ -0.81
SMAD1-215ENST00000515385 SRSF9Q13242 221 aaKnown RBP eCLIP9.97□□□□□ -0.81
SMAD1-215ENST00000515385 ANKRD29Q8N6D5 301 aa9.97□□□□□ -0.81
SMAD1-215ENST00000515385 MSRB1Q9NZV6 116 aa9.97□□□□□ -0.81
SMAD1-215ENST00000515385 RANBP2P49792 3224 aaKnown RBP9.97□□□□□ -0.81
SMAD1-215ENST00000515385 KNTC1P50748 2209 aa9.97□□□□□ -0.81
SMAD1-215ENST00000515385 GAS8-AS1O95177 125 aa9.97□□□□□ -0.81
SMAD1-215ENST00000515385 TGFAP01135 160 aa9.97□□□□□ -0.81
SMAD1-215ENST00000515385 ORM1P02763 201 aa9.97□□□□□ -0.81
SMAD1-215ENST00000515385 CD7P09564 240 aa9.97□□□□□ -0.81
SMAD1-215ENST00000515385 TMEM200BQ69YZ2 307 aa9.97□□□□□ -0.81
SMAD1-215ENST00000515385 IL17RELQ6ZVW7 336 aa9.97□□□□□ -0.81
SMAD1-215ENST00000515385 CACNA1EQ15878 2313 aa9.96□□□□□ -0.81
SMAD1-215ENST00000515385 TCL1BO95988 128 aa9.96□□□□□ -0.81
SMAD1-215ENST00000515385 CCL3L1P16619 93 aa9.96□□□□□ -0.81
SMAD1-215ENST00000515385 NDUFA11Q86Y39 141 aa9.96□□□□□ -0.81
SMAD1-215ENST00000515385 REV3LO60673 3130 aa9.96□□□□□ -0.82
SMAD1-215ENST00000515385 ZNF815PA8K554 130 aa9.95□□□□□ -0.82
SMAD1-215ENST00000515385 IGHV1-46P01743 117 aa9.95□□□□□ -0.82
SMAD1-215ENST00000515385 ZNF672Q499Z4 452 aaPredicted RBP9.95□□□□□ -0.82
SMAD1-215ENST00000515385 ORMDL2Q53FV1 153 aa9.95□□□□□ -0.82
SMAD1-215ENST00000515385 PMS2CLQ68D20 193 aa9.95□□□□□ -0.82
SMAD1-215ENST00000515385 ZNF474Q6S9Z5 364 aaPredicted RBP9.95□□□□□ -0.82
SMAD1-215ENST00000515385 SCGB1D4Q6XE38 83 aa9.95□□□□□ -0.82
SMAD1-215ENST00000515385 ZNF575Q86XF7 245 aa9.95□□□□□ -0.82
SMAD1-215ENST00000515385 NRACQ8N912 160 aa9.95□□□□□ -0.82
SMAD1-215ENST00000515385 AJUBAQ96IF1 538 aa9.95□□□□□ -0.82
SMAD1-215ENST00000515385 PSMG3-AS1Q96PY0 264 aa9.95□□□□□ -0.82
SMAD1-215ENST00000515385 MDFICQ9P1T7 246 aa9.95□□□□□ -0.82
SMAD1-215ENST00000515385 IGKV2-40A0A087WW87 121 aaPredicted RBP9.95□□□□□ -0.82
SMAD1-215ENST00000515385 IGKV2D-40P01614 121 aaPredicted RBP9.95□□□□□ -0.82
SMAD1-215ENST00000515385 CFIP05156 583 aa9.95□□□□□ -0.82
SMAD1-215ENST00000515385 ZNF80P51504 273 aaPredicted RBP9.95□□□□□ -0.82
SMAD1-215ENST00000515385 PPP1R27Q86WC6 154 aa9.95□□□□□ -0.82
SMAD1-215ENST00000515385 PRADC1Q9BSG0 188 aa9.95□□□□□ -0.82
SMAD1-215ENST00000515385 SPANXCQ9NY87 97 aa9.95□□□□□ -0.82
SMAD1-215ENST00000515385 VCANP13611 3396 aa9.95□□□□□ -0.82
SMAD1-215ENST00000515385 CDH23Q9H251 3354 aa9.94□□□□□ -0.82
SMAD1-215ENST00000515385 GATA1P15976 413 aaPredicted RBP9.94□□□□□ -0.82
SMAD1-215ENST00000515385 RPL7P18124 248 aaKnown RBP9.94□□□□□ -0.82
SMAD1-215ENST00000515385 C9orf106Q8NAJ2 232 aa9.94□□□□□ -0.82
SMAD1-215ENST00000515385 NEXN-AS1Q8NBZ9 246 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms