RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 TCTEX1D4Q5JR98 221 aa10.51□□□□□ -0.73
TCOF1-213ENST00000514442 ASCL2Q99929 193 aa10.51□□□□□ -0.73
TCOF1-213ENST00000514442 GAGE12JA6NER3 117 aa10.51□□□□□ -0.73
TCOF1-213ENST00000514442 GAGE7O76087 117 aa10.51□□□□□ -0.73
TCOF1-213ENST00000514442 GAGE12FP0CL80 117 aa10.51□□□□□ -0.73
TCOF1-213ENST00000514442 GAGE12GP0CL81 117 aa10.51□□□□□ -0.73
TCOF1-213ENST00000514442 GAGE12IP0CL82 117 aa10.51□□□□□ -0.73
TCOF1-213ENST00000514442 GAGE4Q13068 117 aa10.51□□□□□ -0.73
TCOF1-213ENST00000514442 TRGV9Q99603 122 aa10.51□□□□□ -0.73
TCOF1-213ENST00000514442 PRR20EP86478 221 aa10.51□□□□□ -0.73
TCOF1-213ENST00000514442 PRR20CP86479 221 aa10.51□□□□□ -0.73
TCOF1-213ENST00000514442 PRR20DP86480 221 aa10.51□□□□□ -0.73
TCOF1-213ENST00000514442 PRR20BP86481 221 aa10.51□□□□□ -0.73
TCOF1-213ENST00000514442 PRR20AP86496 221 aa10.51□□□□□ -0.73
TCOF1-213ENST00000514442 ZNF688P0C7X2 276 aa10.5□□□□□ -0.73
TCOF1-213ENST00000514442 C3orf36Q3SXR2 165 aa10.5□□□□□ -0.73
TCOF1-213ENST00000514442 SPATA12Q7Z6I5 190 aa10.5□□□□□ -0.73
TCOF1-213ENST00000514442 TMEM158Q8WZ71 300 aa10.5□□□□□ -0.73
TCOF1-213ENST00000514442 IGLV3-9A0A075B6K5 115 aa10.5□□□□□ -0.73
TCOF1-213ENST00000514442 ZNF134P52741 427 aa10.5□□□□□ -0.73
TCOF1-213ENST00000514442 TMEM8BA6NDV4 472 aa10.5□□□□□ -0.73
TCOF1-213ENST00000514442 SMKR1H3BMG3 65 aa10.5□□□□□ -0.73
TCOF1-213ENST00000514442 DIAPH2-AS1Q14236 149 aa10.5□□□□□ -0.73
TCOF1-213ENST00000514442 C12orf74Q32Q52 190 aa10.5□□□□□ -0.73
TCOF1-213ENST00000514442 PCP2Q8IVA1 136 aa10.5□□□□□ -0.73
TCOF1-213ENST00000514442 TNFRSF18Q9Y5U5 241 aa10.5□□□□□ -0.73
TCOF1-213ENST00000514442 ORMDL2Q53FV1 153 aa10.49□□□□□ -0.73
TCOF1-213ENST00000514442 SPRNQ5BIV9 151 aa10.49□□□□□ -0.73
TCOF1-213ENST00000514442 FOXI2Q6ZQN5 318 aa10.49□□□□□ -0.73
TCOF1-213ENST00000514442 CLUHP3Q96NS8 147 aa10.49□□□□□ -0.73
TCOF1-213ENST00000514442 SIGLEC8Q9NYZ4 499 aa10.49□□□□□ -0.73
TCOF1-213ENST00000514442 IGF2BP2-AS1Q96M15 143 aa10.49□□□□□ -0.73
TCOF1-213ENST00000514442 ERG28Q9UKR5 140 aa10.49□□□□□ -0.73
TCOF1-213ENST00000514442 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.49□□□□□ -0.733e-7■■■■□ 22.4
TCOF1-213ENST00000514442 H7C1H1 209 aa10.49□□□□□ -0.73
TCOF1-213ENST00000514442 C8orf86Q6ZUL3 223 aa10.49□□□□□ -0.73
TCOF1-213ENST00000514442 Q8TAT8 98 aa10.49□□□□□ -0.73
TCOF1-213ENST00000514442 IGLL5B9A064 214 aa10.49□□□□□ -0.73
TCOF1-213ENST00000514442 WFDC2Q14508 124 aa10.49□□□□□ -0.73
TCOF1-213ENST00000514442 FAM104BQ5XKR9 115 aa10.48□□□□□ -0.73
TCOF1-213ENST00000514442 STHQ8IWL8 128 aa10.48□□□□□ -0.73
TCOF1-213ENST00000514442 FGF23Q9GZV9 251 aaPredicted RBP10.48□□□□□ -0.73
TCOF1-213ENST00000514442 TMEM14BQ9NUH8 114 aa10.48□□□□□ -0.73
TCOF1-213ENST00000514442 RNF114Q9Y508 228 aa10.48□□□□□ -0.73
TCOF1-213ENST00000514442 TRBV20-1A0A075B6N2 111 aa10.48□□□□□ -0.73
TCOF1-213ENST00000514442 C15orf65H3BRN8 121 aa10.48□□□□□ -0.73
TCOF1-213ENST00000514442 TRAV2A0A0B4J234 112 aa10.48□□□□□ -0.73
TCOF1-213ENST00000514442 WISP2O76076 250 aa10.48□□□□□ -0.73
TCOF1-213ENST00000514442 NDUFS7O75251 213 aa10.48□□□□□ -0.73
TCOF1-213ENST00000514442 PPP1R17O96001 155 aa10.48□□□□□ -0.73
TCOF1-213ENST00000514442 TPSG1Q9NRR2 321 aa10.48□□□□□ -0.73
TCOF1-213ENST00000514442 HTN3P15516 51 aa10.47□□□□□ -0.73
TCOF1-213ENST00000514442 TMEM95Q3KNT9 176 aa10.47□□□□□ -0.73
TCOF1-213ENST00000514442 ZNF295-AS1Q8N0V1 137 aa10.47□□□□□ -0.73
TCOF1-213ENST00000514442 SMIM20Q8N5G0 67 aa10.47□□□□□ -0.73
TCOF1-213ENST00000514442 IGFL2Q6UWQ7 119 aa10.47□□□□□ -0.73
TCOF1-213ENST00000514442 LINC01356Q8N9X3 169 aa10.47□□□□□ -0.73
TCOF1-213ENST00000514442 SH2D1AO60880 128 aa10.47□□□□□ -0.73
TCOF1-213ENST00000514442 MSMBP08118 114 aa10.47□□□□□ -0.73
TCOF1-213ENST00000514442 ATXN8Q156A1 80 aa10.47□□□□□ -0.73
TCOF1-213ENST00000514442 TEX36Q5VZQ5 186 aa10.47□□□□□ -0.73
TCOF1-213ENST00000514442 JMJD8Q96S16 334 aa10.47□□□□□ -0.73
TCOF1-213ENST00000514442 DKK4Q9UBT3 224 aa10.47□□□□□ -0.73
TCOF1-213ENST00000514442 SHANK1Q9Y566 2161 aa10.47□□□□□ -0.73
TCOF1-213ENST00000514442 TRAV21A0A0B4J279 112 aa10.47□□□□□ -0.73
TCOF1-213ENST00000514442 BOD1L2Q8IYS8 172 aa10.47□□□□□ -0.73
TCOF1-213ENST00000514442 TRGV2A0A075B6R0 118 aa10.46□□□□□ -0.73
TCOF1-213ENST00000514442 C9JAW5 83 aa10.46□□□□□ -0.73
TCOF1-213ENST00000514442 SLC25A16P16260 332 aa10.46□□□□□ -0.73
TCOF1-213ENST00000514442 DKK2Q9UBU2 259 aa10.46□□□□□ -0.73
TCOF1-213ENST00000514442 ATP6V0E1O15342 81 aa10.46□□□□□ -0.73
TCOF1-213ENST00000514442 ZNF833PQ6ZTB9 187 aa10.46□□□□□ -0.73
TCOF1-213ENST00000514442 TMEM213A2RRL7 107 aa10.46□□□□□ -0.74
TCOF1-213ENST00000514442 TP73-AS1Q9UF72 201 aa10.46□□□□□ -0.74
TCOF1-213ENST00000514442 FAM208BQ5VWN6 2430 aa10.46□□□□□ -0.74
TCOF1-213ENST00000514442 PLA2G5P39877 138 aa10.45□□□□□ -0.74
TCOF1-213ENST00000514442 C11orf53Q8IXP5 236 aa10.45□□□□□ -0.74
TCOF1-213ENST00000514442 LINC01549A6NIU2 74 aa10.45□□□□□ -0.74
TCOF1-213ENST00000514442 SHISA9B4DS77 424 aa10.45□□□□□ -0.74
TCOF1-213ENST00000514442 G3V318 75 aa10.45□□□□□ -0.74
TCOF1-213ENST00000514442 SPRY4Q9C004 299 aa10.45□□□□□ -0.74
TCOF1-213ENST00000514442 UBE2E1P51965 193 aa10.45□□□□□ -0.74
TCOF1-213ENST00000514442 DEFB104AQ8WTQ1 72 aa10.45□□□□□ -0.74
TCOF1-213ENST00000514442 C1orf122Q6ZSJ8 110 aa10.45□□□□□ -0.74
TCOF1-213ENST00000514442 OR13C6PQ8NH95 151 aa10.45□□□□□ -0.74
TCOF1-213ENST00000514442 IGFBPL1Q8WX77 278 aa10.45□□□□□ -0.74
TCOF1-213ENST00000514442 MYMXA0A1B0GTQ4 84 aa10.44□□□□□ -0.74
TCOF1-213ENST00000514442 MRPL51Q4U2R6 128 aaKnown RBP10.44□□□□□ -0.74
TCOF1-213ENST00000514442 PIP4P2Q8N4L2 257 aa10.44□□□□□ -0.74
TCOF1-213ENST00000514442 SRSF8Q9BRL6 282 aaKnown RBP10.44□□□□□ -0.74
TCOF1-213ENST00000514442 PRO3102Q9H379 93 aa10.44□□□□□ -0.74
TCOF1-213ENST00000514442 MALRD1Q5VYJ5 2156 aa10.44□□□□□ -0.74
TCOF1-213ENST00000514442 TRBV7-1A0A0A6YYK4 115 aa10.44□□□□□ -0.74
TCOF1-213ENST00000514442 PRSS46E5RG02 174 aa10.44□□□□□ -0.74
TCOF1-213ENST00000514442 FCN3O75636 299 aa10.44□□□□□ -0.74
TCOF1-213ENST00000514442 FXYD2P54710 66 aa10.44□□□□□ -0.74
TCOF1-213ENST00000514442 SUMO2P61956 95 aaKnown RBP10.44□□□□□ -0.74
TCOF1-213ENST00000514442 Q8N976 141 aa10.44□□□□□ -0.74
TCOF1-213ENST00000514442 NDUFA4L2Q9NRX3 87 aa10.44□□□□□ -0.74
TCOF1-213ENST00000514442 TNFRSF6BO95407 300 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms