RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 CLUHP3Q96NS8 147 aa7.51□□□□□ -1.21
NEDD9-214ENST00000513989 RARRES2Q99969 163 aa7.51□□□□□ -1.21
NEDD9-214ENST00000513989 CSTL1Q9H114 145 aa7.51□□□□□ -1.21
NEDD9-214ENST00000513989 LOC102723971A0A1B0GUV8 181 aa7.5□□□□□ -1.21
NEDD9-214ENST00000513989 PRAC2D3DTV9 90 aa7.5□□□□□ -1.21
NEDD9-214ENST00000513989 F6UB75 175 aa7.5□□□□□ -1.21
NEDD9-214ENST00000513989 UBE2CO00762 179 aa7.5□□□□□ -1.21
NEDD9-214ENST00000513989 IGKV3-20P01619 116 aa7.5□□□□□ -1.21
NEDD9-214ENST00000513989 AMBPP02760 352 aa7.5□□□□□ -1.21
NEDD9-214ENST00000513989 RPL35AP18077 110 aaKnown RBP7.5□□□□□ -1.21
NEDD9-214ENST00000513989 LEPP41159 167 aa7.5□□□□□ -1.21
NEDD9-214ENST00000513989 AKR1C3P42330 323 aa7.5□□□□□ -1.21
NEDD9-214ENST00000513989 ATP5G3P48201 142 aa7.5□□□□□ -1.21
NEDD9-214ENST00000513989 ZNF138P52744 262 aa7.5□□□□□ -1.21
NEDD9-214ENST00000513989 UBE2G1P62253 170 aa7.5□□□□□ -1.21
NEDD9-214ENST00000513989 TOR2AQ5JU69 321 aa7.5□□□□□ -1.21
NEDD9-214ENST00000513989 ZNF506Q5JVG8 444 aa7.5□□□□□ -1.21
NEDD9-214ENST00000513989 SAPCD1Q5SSQ6 148 aa7.5□□□□□ -1.21
NEDD9-214ENST00000513989 FMC1Q96HJ9 113 aa7.5□□□□□ -1.21
NEDD9-214ENST00000513989 NDFIP1Q9BT67 221 aa7.5□□□□□ -1.21
NEDD9-214ENST00000513989 C1QTNF4Q9BXJ3 329 aa7.5□□□□□ -1.21
NEDD9-214ENST00000513989 AGPAT4-IT1Q9H0P7 198 aa7.5□□□□□ -1.21
NEDD9-214ENST00000513989 MED9Q9NWA0 146 aa7.5□□□□□ -1.21
NEDD9-214ENST00000513989 CSMD3Q7Z407 3707 aa7.5□□□□□ -1.21
NEDD9-214ENST00000513989 IGKV2-40A0A087WW87 121 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-214ENST00000513989 KIR2DL5BA0A0G2JN68 375 aa7.49□□□□□ -1.21
NEDD9-214ENST00000513989 KIR2DL5BA0A0G2JPC4 375 aa7.49□□□□□ -1.21
NEDD9-214ENST00000513989 TRBV7-9A0A0J9YWB2 115 aa7.49□□□□□ -1.21
NEDD9-214ENST00000513989 RAB19A4D1S5 217 aa7.49□□□□□ -1.21
NEDD9-214ENST00000513989 NPIPB6E9PJ23 425 aa7.49□□□□□ -1.21
NEDD9-214ENST00000513989 IGKV2D-40P01614 121 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-214ENST00000513989 ZNF705DP0CH99 300 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-214ENST00000513989 ZNF705BP0CI00 300 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-214ENST00000513989 GNG5P63218 68 aa7.49□□□□□ -1.21
NEDD9-214ENST00000513989 ZNF124Q15973 351 aa7.49□□□□□ -1.21
NEDD9-214ENST00000513989 GDF5OSQ5U4N7 250 aa7.49□□□□□ -1.21
NEDD9-214ENST00000513989 TRPT1Q86TN4 253 aaKnown RBP7.49□□□□□ -1.21
NEDD9-214ENST00000513989 KIR2DL5AQ8N109 375 aa7.49□□□□□ -1.21
NEDD9-214ENST00000513989 TMEM75Q8N9X5 138 aa7.49□□□□□ -1.21
NEDD9-214ENST00000513989 KIR2DL5BQ8NHK3 375 aa7.49□□□□□ -1.21
NEDD9-214ENST00000513989 ODF3Q96PU9 254 aa7.49□□□□□ -1.21
NEDD9-214ENST00000513989 VGLL1Q99990 258 aa7.49□□□□□ -1.21
NEDD9-214ENST00000513989 ZNF492Q9P255 531 aa7.49□□□□□ -1.21
NEDD9-214ENST00000513989 LENEPQ9Y5L5 61 aa7.49□□□□□ -1.21
NEDD9-214ENST00000513989 RBMY1BA6NDE4 496 aaKnown RBP7.48□□□□□ -1.21
NEDD9-214ENST00000513989 RBMY1EA6NEQ0 496 aaKnown RBP7.48□□□□□ -1.21
NEDD9-214ENST00000513989 TMEM250H0YL14 139 aa7.48□□□□□ -1.21
NEDD9-214ENST00000513989 RBMY1DP0C7P1 496 aaKnown RBP7.48□□□□□ -1.21
NEDD9-214ENST00000513989 TAS2R60P59551 318 aa7.48□□□□□ -1.21
NEDD9-214ENST00000513989 DEFB1P60022 68 aa7.48□□□□□ -1.21
NEDD9-214ENST00000513989 FLI1Q01543 452 aaPredicted RBP7.48□□□□□ -1.21
NEDD9-214ENST00000513989 ERCC8Q13216 396 aa7.48□□□□□ -1.21
NEDD9-214ENST00000513989 TMEM183BQ1AE95 376 aa7.48□□□□□ -1.21
NEDD9-214ENST00000513989 PRNTQ86SH4 94 aa7.48□□□□□ -1.21
NEDD9-214ENST00000513989 CITED4Q96RK1 184 aa7.48□□□□□ -1.21
NEDD9-214ENST00000513989 WFDC10AQ9H1F0 79 aa7.48□□□□□ -1.21
NEDD9-214ENST00000513989 PSG8Q9UQ74 426 aa7.48□□□□□ -1.21
NEDD9-214ENST00000513989 ZFP30Q9Y2G7 519 aa7.48□□□□□ -1.21
NEDD9-214ENST00000513989 KLF12Q9Y4X4 402 aa7.48□□□□□ -1.21
NEDD9-214ENST00000513989 SCO2A0A1W2PP80 73 aa7.47□□□□□ -1.21
NEDD9-214ENST00000513989 GPX1P07203 203 aa7.47□□□□□ -1.21
NEDD9-214ENST00000513989 CT45A10P0DMU9 189 aa7.47□□□□□ -1.21
NEDD9-214ENST00000513989 CDKN1BP46527 198 aa7.47□□□□□ -1.21
NEDD9-214ENST00000513989 CEBPGP53567 150 aa7.47□□□□□ -1.21
NEDD9-214ENST00000513989 C11orf52Q96A22 123 aa7.47□□□□□ -1.21
NEDD9-214ENST00000513989 LINC00479Q96M42 142 aa7.47□□□□□ -1.21
NEDD9-214ENST00000513989 SLC35B3Q9H1N7 401 aa7.47□□□□□ -1.21
NEDD9-214ENST00000513989 TREM1Q9NP99 234 aa7.47□□□□□ -1.21
NEDD9-214ENST00000513989 LYSTQ99698 3801 aa7.47□□□□□ -1.21
NEDD9-214ENST00000513989 HUWE1Q7Z6Z7 4374 aaKnown RBP7.47□□□□□ -1.21
NEDD9-214ENST00000513989 TRAV34A0A0B4J273 112 aa7.46□□□□□ -1.22
NEDD9-214ENST00000513989 TRBV6-1A0A0K0K1D8 114 aa7.46□□□□□ -1.22
NEDD9-214ENST00000513989 A8MTW9 85 aa7.46□□□□□ -1.22
NEDD9-214ENST00000513989 CA1P00915 261 aaPredicted RBP7.46□□□□□ -1.22
NEDD9-214ENST00000513989 FRMD6-AS1P0C7T7 363 aa7.46□□□□□ -1.22
NEDD9-214ENST00000513989 RPL35P42766 123 aaKnown RBP7.46□□□□□ -1.22
NEDD9-214ENST00000513989 FAM74A3Q4VXF1 159 aa7.46□□□□□ -1.22
NEDD9-214ENST00000513989 UQCC3Q6UW78 93 aa7.46□□□□□ -1.22
NEDD9-214ENST00000513989 BAGE2Q86Y30 109 aa7.46□□□□□ -1.22
NEDD9-214ENST00000513989 C2CD4CQ8TF44 421 aa7.46□□□□□ -1.22
NEDD9-214ENST00000513989 SGK494Q96LW2 274 aa7.46□□□□□ -1.22
NEDD9-214ENST00000513989 BIN3Q9NQY0 253 aa7.46□□□□□ -1.22
NEDD9-214ENST00000513989 TRAV8-1A0A0A6YYK1 113 aa7.45□□□□□ -1.22
NEDD9-214ENST00000513989 PRB4P10163 310 aaPredicted RBP7.45□□□□□ -1.22
NEDD9-214ENST00000513989 CRISP2P16562 243 aa7.45□□□□□ -1.22
NEDD9-214ENST00000513989 RNASE4P34096 147 aaKnown RBP7.45□□□□□ -1.22
NEDD9-214ENST00000513989 GNG4P50150 75 aa7.45□□□□□ -1.22
NEDD9-214ENST00000513989 ZNF674Q2M3X9 581 aa7.45□□□□□ -1.22
NEDD9-214ENST00000513989 SMUG1Q53HV7 270 aa7.45□□□□□ -1.22
NEDD9-214ENST00000513989 LINC00322Q6ZN03 302 aaPredicted RBP7.45□□□□□ -1.22
NEDD9-214ENST00000513989 Q6ZWC4 215 aa7.45□□□□□ -1.22
NEDD9-214ENST00000513989 B9D2Q9BPU9 175 aa7.45□□□□□ -1.22
NEDD9-214ENST00000513989 C20orf144Q9BQM9 153 aa7.45□□□□□ -1.22
NEDD9-214ENST00000513989 NIPSNAP3BQ9BS92 247 aa7.45□□□□□ -1.22
NEDD9-214ENST00000513989 TMEM208Q9BTX3 173 aa7.45□□□□□ -1.22
NEDD9-214ENST00000513989 XCL2Q9UBD3 114 aa7.45□□□□□ -1.22
NEDD9-214ENST00000513989 GOLT1BQ9Y3E0 138 aa7.45□□□□□ -1.22
NEDD9-214ENST00000513989 DYNC2H1Q8NCM8 4307 aaKnown RBP7.45□□□□□ -1.22
NEDD9-214ENST00000513989 TENM2Q9NT68 2774 aa7.45□□□□□ -1.22
NEDD9-214ENST00000513989 RYR2Q92736 4967 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms