RNA–Protein interactions for RNA: ENST00000513677.5

GYPB-215, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 221 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-215ENST00000513677 LINC00869P0C866 280 aa3.92□□□□□ -1.78
GYPB-215ENST00000513677 AMTP48728 403 aa3.92□□□□□ -1.78
GYPB-215ENST00000513677 ATP5IP56385 69 aaPredicted RBP3.92□□□□□ -1.78
GYPB-215ENST00000513677 RPP30P78346 268 aaKnown RBP3.92□□□□□ -1.78
GYPB-215ENST00000513677 IL18Q14116 193 aa3.92□□□□□ -1.78
GYPB-215ENST00000513677 SURF2Q15527 256 aaPredicted RBP3.92□□□□□ -1.78
GYPB-215ENST00000513677 NFE4Q86UQ8 179 aa3.92□□□□□ -1.78
GYPB-215ENST00000513677 PRRT1Q99946 306 aa3.92□□□□□ -1.78
GYPB-215ENST00000513677 NAA50Q9GZZ1 169 aaKnown RBP3.92□□□□□ -1.78
GYPB-215ENST00000513677 ARL6Q9H0F7 186 aa3.92□□□□□ -1.78
GYPB-215ENST00000513677 FUT9Q9Y231 359 aa3.92□□□□□ -1.78
GYPB-215ENST00000513677 TRAV9-2A0A087WT02 112 aa3.91□□□□□ -1.78
GYPB-215ENST00000513677 LINC00854A0A1B0GVQ3 168 aa3.91□□□□□ -1.78
GYPB-215ENST00000513677 E5RGE8 158 aa3.91□□□□□ -1.78
GYPB-215ENST00000513677 H3BNG1 76 aa3.91□□□□□ -1.78
GYPB-215ENST00000513677 SLC17A3O00476 420 aa3.91□□□□□ -1.78
GYPB-215ENST00000513677 SYNGR2O43760 224 aa3.91□□□□□ -1.78
GYPB-215ENST00000513677 PRAF2O60831 178 aa3.91□□□□□ -1.78
GYPB-215ENST00000513677 MED6O75586 246 aa3.91□□□□□ -1.78
GYPB-215ENST00000513677 HOXB5P09067 269 aa3.91□□□□□ -1.78
GYPB-215ENST00000513677 LEPP41159 167 aa3.91□□□□□ -1.78
GYPB-215ENST00000513677 SRPXP78539 464 aa3.91□□□□□ -1.78
GYPB-215ENST00000513677 ZNF415Q09FC8 603 aa3.91□□□□□ -1.78
GYPB-215ENST00000513677 ERCC8Q13216 396 aa3.91□□□□□ -1.78
GYPB-215ENST00000513677 WFDC10BQ8IUB3 73 aa3.91□□□□□ -1.78
GYPB-215ENST00000513677 LINC00612Q8N6U2 182 aa3.91□□□□□ -1.78
GYPB-215ENST00000513677 NEXN-AS1Q8NBZ9 246 aa3.91□□□□□ -1.78
GYPB-215ENST00000513677 C15orf40Q8WUR7 153 aa3.91□□□□□ -1.78
GYPB-215ENST00000513677 CIB3Q96Q77 187 aaPredicted RBP3.91□□□□□ -1.78
GYPB-215ENST00000513677 MIXL1Q9H2W2 232 aa3.91□□□□□ -1.78
GYPB-215ENST00000513677 MRPL16Q9NX20 251 aaKnown RBP3.91□□□□□ -1.78
GYPB-215ENST00000513677 SCP2D1Q9UJQ7 156 aa3.91□□□□□ -1.78
GYPB-215ENST00000513677 STRAPQ9Y3F4 350 aaKnown RBP3.91□□□□□ -1.78
GYPB-215ENST00000513677 KLF12Q9Y4X4 402 aa3.91□□□□□ -1.78
GYPB-215ENST00000513677 LY96Q9Y6Y9 160 aa3.91□□□□□ -1.78
GYPB-215ENST00000513677 A0A087X0K7 114 aa3.9□□□□□ -1.79
GYPB-215ENST00000513677 TRGV4A0A0C4DH28 118 aa3.9□□□□□ -1.79
GYPB-215ENST00000513677 PRSS46E5RG02 174 aa3.9□□□□□ -1.79
GYPB-215ENST00000513677 CTDSP2O14595 271 aa3.9□□□□□ -1.79
GYPB-215ENST00000513677 CCNKO75909 580 aa3.9□□□□□ -1.79
GYPB-215ENST00000513677 CT45A10P0DMU9 189 aa3.9□□□□□ -1.79
GYPB-215ENST00000513677 EVI2AP22794 236 aa3.9□□□□□ -1.79
GYPB-215ENST00000513677 RNASE4P34096 147 aaKnown RBP3.9□□□□□ -1.79
GYPB-215ENST00000513677 SLC38A11Q08AI6 406 aa3.9□□□□□ -1.79
GYPB-215ENST00000513677 DAZ2Q13117 558 aaKnown RBP3.9□□□□□ -1.79
GYPB-215ENST00000513677 BTN1A1Q13410 526 aa3.9□□□□□ -1.79
GYPB-215ENST00000513677 LYPD5Q6UWN5 251 aa3.9□□□□□ -1.79
GYPB-215ENST00000513677 LCN15Q6UWW0 184 aa3.9□□□□□ -1.79
GYPB-215ENST00000513677 S100A7AQ86SG5 101 aa3.9□□□□□ -1.79
GYPB-215ENST00000513677 ZBTB8BQ8NAP8 495 aaPredicted RBP3.9□□□□□ -1.79
GYPB-215ENST00000513677 SMIM4Q8WVI0 70 aa3.9□□□□□ -1.79
GYPB-215ENST00000513677 TMED6Q8WW62 240 aa3.9□□□□□ -1.79
GYPB-215ENST00000513677 SCGB3A2Q96PL1 93 aa3.9□□□□□ -1.79
GYPB-215ENST00000513677 C20orf144Q9BQM9 153 aa3.9□□□□□ -1.79
GYPB-215ENST00000513677 PYGO2Q9BRQ0 406 aa3.9□□□□□ -1.79
GYPB-215ENST00000513677 LINC00467Q9BRT7 94 aa3.9□□□□□ -1.79
GYPB-215ENST00000513677 ARV1Q9H2C2 271 aa3.9□□□□□ -1.79
GYPB-215ENST00000513677 Q9HAA7 133 aa3.9□□□□□ -1.79
GYPB-215ENST00000513677 ZNF331Q9NQX6 463 aaPredicted RBP3.9□□□□□ -1.79
GYPB-215ENST00000513677 PSENENQ9NZ42 101 aa3.9□□□□□ -1.79
GYPB-215ENST00000513677 CCDC59Q9P031 241 aaKnown RBP3.9□□□□□ -1.79
GYPB-215ENST00000513677 ANKRD20A5PA0PJZ0 165 aa3.89□□□□□ -1.79
GYPB-215ENST00000513677 C7orf71A4D174 169 aa3.89□□□□□ -1.79
GYPB-215ENST00000513677 GOSR2O14653 212 aa3.89□□□□□ -1.79
GYPB-215ENST00000513677 SSSCA1O60232 199 aa3.89□□□□□ -1.79
GYPB-215ENST00000513677 COX7A2P2O60397 106 aa3.89□□□□□ -1.79
GYPB-215ENST00000513677 PITX3O75364 302 aa3.89□□□□□ -1.79
GYPB-215ENST00000513677 ZNF324O75467 553 aaPredicted RBP3.89□□□□□ -1.79
GYPB-215ENST00000513677 METTL15P1P0C7V9 234 aa3.89□□□□□ -1.79
GYPB-215ENST00000513677 SELENOTP62341 195 aa3.89□□□□□ -1.79
GYPB-215ENST00000513677 POLR2GP62487 172 aaKnown RBP eCLIP3.89□□□□□ -1.79
GYPB-215ENST00000513677 MRPS10P82664 201 aaKnown RBP3.89□□□□□ -1.79
GYPB-215ENST00000513677 SSBP1Q04837 148 aaKnown RBP3.89□□□□□ -1.79
GYPB-215ENST00000513677 MRPL23Q16540 153 aaKnown RBP3.89□□□□□ -1.79
GYPB-215ENST00000513677 PATE2Q6UY27 113 aa3.89□□□□□ -1.79
GYPB-215ENST00000513677 NEGR1Q7Z3B1 354 aa3.89□□□□□ -1.79
GYPB-215ENST00000513677 LINC00305Q7Z4B0 112 aa3.89□□□□□ -1.79
GYPB-215ENST00000513677 BPIFA4PQ86YQ2 179 aa3.89□□□□□ -1.79
GYPB-215ENST00000513677 ZNF431Q8TF32 576 aaPredicted RBP3.89□□□□□ -1.79
GYPB-215ENST00000513677 PCNPQ8WW12 178 aaKnown RBP3.89□□□□□ -1.79
GYPB-215ENST00000513677 DIRAS2Q96HU8 199 aa3.89□□□□□ -1.79
GYPB-215ENST00000513677 SLC50A1Q9BRV3 221 aa3.89□□□□□ -1.79
GYPB-215ENST00000513677 PRO0255Q9UI72 69 aa3.89□□□□□ -1.79
GYPB-215ENST00000513677 TP53TG3Q9ULZ0 132 aa3.89□□□□□ -1.79
GYPB-215ENST00000513677 RABL2BQ9UNT1 228 aa3.89□□□□□ -1.79
GYPB-215ENST00000513677 HHLA3Q9XRX5 114 aa3.89□□□□□ -1.79
GYPB-215ENST00000513677 TRAV5A0A0B4J249 113 aa3.88□□□□□ -1.79
GYPB-215ENST00000513677 DUXBA0A1W2PPF3 345 aa3.88□□□□□ -1.79
GYPB-215ENST00000513677 H3BQ15 152 aa3.88□□□□□ -1.79
GYPB-215ENST00000513677 AGPAT2O15120 278 aa3.88□□□□□ -1.79
GYPB-215ENST00000513677 MRPS12O15235 138 aaKnown RBP3.88□□□□□ -1.79
GYPB-215ENST00000513677 CRYGDP07320 174 aa3.88□□□□□ -1.79
GYPB-215ENST00000513677 SFTA3P0C7M3 94 aa3.88□□□□□ -1.79
GYPB-215ENST00000513677 CXCL2P19875 107 aa3.88□□□□□ -1.79
GYPB-215ENST00000513677 SRIP30626 198 aa3.88□□□□□ -1.79
GYPB-215ENST00000513677 CRYBA4P53673 196 aa3.88□□□□□ -1.79
GYPB-215ENST00000513677 CD300CQ08708 224 aa3.88□□□□□ -1.79
GYPB-215ENST00000513677 OPCMLQ14982 345 aa3.88□□□□□ -1.79
GYPB-215ENST00000513677 EIF4E3Q8N5X7 224 aaKnown RBP3.88□□□□□ -1.79
GYPB-215ENST00000513677 C11orf72Q8NBR9 251 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms