RNA–Protein interactions for RNA: ENST00000513248.1

NUP54-212, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-212ENST00000513248 KLK5Q9Y337 293 aaPredicted RBP2.51□□□□□ -2.01
NUP54-212ENST00000513248 TMEM56-RWDD3S4R434 201 aa2.51□□□□□ -2.01
NUP54-212ENST00000513248 U3KQ87 197 aa2.51□□□□□ -2.01
NUP54-212ENST00000513248 VWFP04275 2813 aa2.51□□□□□ -2.01
NUP54-212ENST00000513248 TRAV2A0A0B4J234 112 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 DUXBA0A1W2PPF3 345 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 NUPR2A6NF83 97 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 NAP1L6A6NFF2 107 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 KNCNA6PVL3 124 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 FAM25EA8MYX2 175 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 INS-IGF2F8WCM5 200 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 H3BP45 60 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 SYNGR2O43760 224 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 SFT2D2O95562 160 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 LY6G6CO95867 125 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 IGLC1P0CG04 106 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 ORM2P19652 201 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 BCAP31P51572 246 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 ATP5IP56385 69 aaPredicted RBP2.5□□□□□ -2.01
NUP54-212ENST00000513248 YPEL3P61236 119 aaPredicted RBP2.5□□□□□ -2.01
NUP54-212ENST00000513248 NUTF2P61970 127 aaKnown RBP2.5□□□□□ -2.01
NUP54-212ENST00000513248 FGL1Q08830 312 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 PPP1R1AQ13522 171 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 ACTL10Q5JWF8 245 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 PVRIGQ6DKI7 326 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 OR8G2PQ6IF36 304 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 EBLN2Q6P2I7 272 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 PRSS54Q6PEW0 395 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 MORN3Q6PF18 240 aaPredicted RBP2.5□□□□□ -2.01
NUP54-212ENST00000513248 LINC00322Q6ZN03 302 aaPredicted RBP2.5□□□□□ -2.01
NUP54-212ENST00000513248 S100A7AQ86SG5 101 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 OR8I2Q8N0Y5 310 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 OR4B1Q8NGF8 309 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 OR51G1Q8NGK1 321 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 OR11H2Q8NH07 326 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 LRRC20Q8TCA0 184 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 DEDD2Q8WXF8 326 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 OR10C1Q96KK4 312 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 LINC00052Q96N35 136 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 TMEM147Q9BVK8 224 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 MAGT1Q9H0U3 335 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 VSIRQ9H7M9 311 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 SLC25A22Q9H936 323 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 EDA2RQ9HAV5 297 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 PSENENQ9NZ42 101 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 GSKIPQ9P0R6 139 aa2.5□□□□□ -2.01
NUP54-212ENST00000513248 LCE6AA0A183 80 aa2.49□□□□□ -2.01
NUP54-212ENST00000513248 C9orf170A2RU37 121 aa2.49□□□□□ -2.01
NUP54-212ENST00000513248 ZNF701M0R085 212 aaPredicted RBP2.49□□□□□ -2.01
NUP54-212ENST00000513248 DEFB4AO15263 64 aa2.49□□□□□ -2.01
NUP54-212ENST00000513248 SSSCA1O60232 199 aa2.49□□□□□ -2.01
NUP54-212ENST00000513248 ADAP1O75689 374 aa2.49□□□□□ -2.01
NUP54-212ENST00000513248 NDUFB6O95139 128 aa2.49□□□□□ -2.01
NUP54-212ENST00000513248 CFDP00746 253 aaPredicted RBP2.49□□□□□ -2.01
NUP54-212ENST00000513248 IL5P05113 134 aa2.49□□□□□ -2.01
NUP54-212ENST00000513248 OR5G3P0C626 314 aa2.49□□□□□ -2.01
NUP54-212ENST00000513248 PVALBP20472 110 aaPredicted RBP2.49□□□□□ -2.01
NUP54-212ENST00000513248 CRYBB3P26998 211 aa2.49□□□□□ -2.01
NUP54-212ENST00000513248 GPX4P36969 197 aaPredicted RBP2.49□□□□□ -2.01
NUP54-212ENST00000513248 GALR1P47211 349 aa2.49□□□□□ -2.01
NUP54-212ENST00000513248 FXYD7P58549 80 aa2.49□□□□□ -2.01
NUP54-212ENST00000513248 UBE2MP61081 183 aaKnown RBP2.49□□□□□ -2.01
NUP54-212ENST00000513248 RRAS2P62070 204 aaPredicted RBP2.49□□□□□ -2.01
NUP54-212ENST00000513248 SUPT4H1P63272 117 aaKnown RBP2.49□□□□□ -2.01
NUP54-212ENST00000513248 TMEM41BQ5BJD5 291 aa2.49□□□□□ -2.01
NUP54-212ENST00000513248 NMSQ5H8A3 153 aa2.49□□□□□ -2.01
NUP54-212ENST00000513248 BPIFCQ8NFQ6 507 aa2.49□□□□□ -2.01
NUP54-212ENST00000513248 OR10P1Q8NGE3 313 aa2.49□□□□□ -2.01
NUP54-212ENST00000513248 C7orf50Q9BRJ6 194 aaKnown RBP2.49□□□□□ -2.01
NUP54-212ENST00000513248 TMEM208Q9BTX3 173 aa2.49□□□□□ -2.01
NUP54-212ENST00000513248 SRRQ9GZT4 340 aa2.49□□□□□ -2.01
NUP54-212ENST00000513248 MFFQ9GZY8 342 aa2.49□□□□□ -2.01
NUP54-212ENST00000513248 MRPL36Q9P0J6 103 aaKnown RBP2.49□□□□□ -2.01
NUP54-212ENST00000513248 DOK5Q9P104 306 aa2.49□□□□□ -2.01
NUP54-212ENST00000513248 FLVCR2Q9UPI3 526 aa2.49□□□□□ -2.01
NUP54-212ENST00000513248 LSM5Q9Y4Y9 91 aaKnown RBP2.49□□□□□ -2.01
NUP54-212ENST00000513248 V9GYH0 126 aa2.49□□□□□ -2.01
NUP54-212ENST00000513248 CMYA5Q8N3K9 4069 aa2.49□□□□□ -2.01
NUP54-212ENST00000513248 TRAV6A0A075B6T7 132 aa2.48□□□□□ -2.01
NUP54-212ENST00000513248 GOSR2O14653 212 aa2.48□□□□□ -2.01
NUP54-212ENST00000513248 IGKV1-17P01599 117 aa2.48□□□□□ -2.01
NUP54-212ENST00000513248 OR4E1P0C645 316 aa2.48□□□□□ -2.01
NUP54-212ENST00000513248 SLC25A6P12236 298 aa2.48□□□□□ -2.01
NUP54-212ENST00000513248 IL7P13232 177 aa2.48□□□□□ -2.01
NUP54-212ENST00000513248 CAV2P51636 162 aa2.48□□□□□ -2.01
NUP54-212ENST00000513248 EMP1P54849 157 aa2.48□□□□□ -2.01
NUP54-212ENST00000513248 S100A10P60903 97 aa2.48□□□□□ -2.01
NUP54-212ENST00000513248 POLR2GP62487 172 aaKnown RBP eCLIP2.48□□□□□ -2.01
NUP54-212ENST00000513248 RHOBP62745 196 aa2.48□□□□□ -2.01
NUP54-212ENST00000513248 ZNF90Q03938 601 aa2.48□□□□□ -2.01
NUP54-212ENST00000513248 RAB31Q13636 194 aa2.48□□□□□ -2.01
NUP54-212ENST00000513248 USF2Q15853 346 aaPredicted RBP2.48□□□□□ -2.01
NUP54-212ENST00000513248 IAH1Q2TAA2 248 aaPredicted RBP2.48□□□□□ -2.01
NUP54-212ENST00000513248 BSXQ3C1V8 233 aa2.48□□□□□ -2.01
NUP54-212ENST00000513248 SAMD13Q5VXD3 122 aa2.48□□□□□ -2.01
NUP54-212ENST00000513248 CEMP1Q6PRD7 247 aaPredicted RBP2.48□□□□□ -2.01
NUP54-212ENST00000513248 CYP2G1PQ6ZSU1 146 aa2.48□□□□□ -2.01
NUP54-212ENST00000513248 FAM24BQ8N5W8 94 aa2.48□□□□□ -2.01
NUP54-212ENST00000513248 ENKURQ8TC29 256 aa2.48□□□□□ -2.01
NUP54-212ENST00000513248 PHYHIPLQ96FC7 376 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms