RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 A8MTW9 85 aa9.26□□□□□ -0.93
PDPN-210ENST00000513143 C9JQL5 133 aa9.26□□□□□ -0.93
PDPN-210ENST00000513143 IGLV2-11P01706 119 aa9.26□□□□□ -0.93
PDPN-210ENST00000513143 CNN1P51911 297 aaKnown RBP9.26□□□□□ -0.93
PDPN-210ENST00000513143 HIST1H1AQ02539 215 aaPredicted RBP9.26□□□□□ -0.93
PDPN-210ENST00000513143 ERCC8Q13216 396 aa9.26□□□□□ -0.93
PDPN-210ENST00000513143 COMMD7Q86VX2 200 aa9.26□□□□□ -0.93
PDPN-210ENST00000513143 EIF4E3Q8N5X7 224 aaKnown RBP9.26□□□□□ -0.93
PDPN-210ENST00000513143 TMEM75Q8N9X5 138 aa9.26□□□□□ -0.93
PDPN-210ENST00000513143 LINC00477Q96M19 166 aa9.26□□□□□ -0.93
PDPN-210ENST00000513143 LINC00479Q96M42 142 aa9.26□□□□□ -0.93
PDPN-210ENST00000513143 CLUHP3Q96NS8 147 aa9.26□□□□□ -0.93
PDPN-210ENST00000513143 AGPAT4-IT1Q9H0P7 198 aa9.26□□□□□ -0.93
PDPN-210ENST00000513143 PPP1R14DQ9NXH3 145 aa9.26□□□□□ -0.93
PDPN-210ENST00000513143 TRAV34A0A0B4J273 112 aa9.25□□□□□ -0.93
PDPN-210ENST00000513143 FBLL1A6NHQ2 334 aaKnown RBP9.25□□□□□ -0.93
PDPN-210ENST00000513143 AKR1C3P42330 323 aa9.25□□□□□ -0.93
PDPN-210ENST00000513143 UQCC3Q6UW78 93 aa9.25□□□□□ -0.93
PDPN-210ENST00000513143 STHQ8IWL8 128 aa9.25□□□□□ -0.93
PDPN-210ENST00000513143 DNAH3Q8TD57 4116 aa9.24□□□□□ -0.93
PDPN-210ENST00000513143 TRAV8-1A0A0A6YYK1 113 aa9.24□□□□□ -0.93
PDPN-210ENST00000513143 TRBV6-1A0A0K0K1D8 114 aa9.24□□□□□ -0.93
PDPN-210ENST00000513143 S100A9P06702 114 aaKnown RBP9.24□□□□□ -0.93
PDPN-210ENST00000513143 CT45A10P0DMU9 189 aa9.24□□□□□ -0.93
PDPN-210ENST00000513143 ZNF138P52744 262 aa9.24□□□□□ -0.93
PDPN-210ENST00000513143 TMEM183BQ1AE95 376 aa9.24□□□□□ -0.93
PDPN-210ENST00000513143 TMEM78Q5T7P6 136 aa9.24□□□□□ -0.93
PDPN-210ENST00000513143 AMTNQ6UX39 209 aa9.24□□□□□ -0.93
PDPN-210ENST00000513143 TRPT1Q86TN4 253 aaKnown RBP9.24□□□□□ -0.93
PDPN-210ENST00000513143 OR4B1Q8NGF8 309 aa9.24□□□□□ -0.93
PDPN-210ENST00000513143 FMC1Q96HJ9 113 aa9.24□□□□□ -0.93
PDPN-210ENST00000513143 SGK494Q96LW2 274 aa9.24□□□□□ -0.93
PDPN-210ENST00000513143 DERL1Q9BUN8 251 aa9.24□□□□□ -0.93
PDPN-210ENST00000513143 SLC35B3Q9H1N7 401 aa9.24□□□□□ -0.93
PDPN-210ENST00000513143 SRD5A3Q9H8P0 318 aa9.24□□□□□ -0.93
PDPN-210ENST00000513143 TREM1Q9NP99 234 aa9.24□□□□□ -0.93
PDPN-210ENST00000513143 ZNF492Q9P255 531 aa9.24□□□□□ -0.93
PDPN-210ENST00000513143 PSG8Q9UQ74 426 aa9.24□□□□□ -0.93
PDPN-210ENST00000513143 RBMY1BA6NDE4 496 aaKnown RBP9.23□□□□□ -0.93
PDPN-210ENST00000513143 RBMY1EA6NEQ0 496 aaKnown RBP9.23□□□□□ -0.93
PDPN-210ENST00000513143 A8MZ25 164 aa9.23□□□□□ -0.93
PDPN-210ENST00000513143 IGKV3-20P01619 116 aa9.23□□□□□ -0.93
PDPN-210ENST00000513143 RBMY1DP0C7P1 496 aaKnown RBP9.23□□□□□ -0.93
PDPN-210ENST00000513143 IGHV4-30-4P0DP06 118 aa9.23□□□□□ -0.93
PDPN-210ENST00000513143 RPL35P42766 123 aaKnown RBP9.23□□□□□ -0.93
PDPN-210ENST00000513143 TAS2R60P59551 318 aa9.23□□□□□ -0.93
PDPN-210ENST00000513143 UBE2G1P62253 170 aa9.23□□□□□ -0.93
PDPN-210ENST00000513143 FLI1Q01543 452 aaPredicted RBP9.23□□□□□ -0.93
PDPN-210ENST00000513143 FAM19A4Q96LR4 140 aa9.23□□□□□ -0.93
PDPN-210ENST00000513143 ODF3Q96PU9 254 aa9.23□□□□□ -0.93
PDPN-210ENST00000513143 AURKAIP1Q9NWT8 199 aaPredicted RBP9.23□□□□□ -0.93
PDPN-210ENST00000513143 LENEPQ9Y5L5 61 aa9.23□□□□□ -0.93
PDPN-210ENST00000513143 TRBV7-9A0A0J9YWB2 115 aa9.22□□□□□ -0.93
PDPN-210ENST00000513143 PRNTQ86SH4 94 aa9.22□□□□□ -0.93
PDPN-210ENST00000513143 Q86TA4 180 aa9.22□□□□□ -0.93
PDPN-210ENST00000513143 Q8TAT8 98 aa9.22□□□□□ -0.93
PDPN-210ENST00000513143 TVP23CQ96ET8 276 aa9.22□□□□□ -0.93
PDPN-210ENST00000513143 PARLQ9H300 379 aa9.22□□□□□ -0.93
PDPN-210ENST00000513143 LTAP01374 205 aa9.21□□□□□ -0.94
PDPN-210ENST00000513143 CRISP2P16562 243 aa9.21□□□□□ -0.94
PDPN-210ENST00000513143 CEBPGP53567 150 aa9.21□□□□□ -0.94
PDPN-210ENST00000513143 NDUFA5Q16718 116 aa9.21□□□□□ -0.94
PDPN-210ENST00000513143 SAPCD1Q5SSQ6 148 aa9.21□□□□□ -0.94
PDPN-210ENST00000513143 IGF2BP2-AS1Q96M15 143 aa9.21□□□□□ -0.94
PDPN-210ENST00000513143 TUBA4BQ9H853 241 aa9.21□□□□□ -0.94
PDPN-210ENST00000513143 ZFP30Q9Y2G7 519 aa9.21□□□□□ -0.94
PDPN-210ENST00000513143 TRBV20OR9-2A0A075B6H5 130 aa9.2□□□□□ -0.94
PDPN-210ENST00000513143 LOC102724200A0A096LPH7 203 aaPredicted RBP9.2□□□□□ -0.94
PDPN-210ENST00000513143 C9JCJ5 164 aa9.2□□□□□ -0.94
PDPN-210ENST00000513143 PRB2P02812 416 aaPredicted RBP9.2□□□□□ -0.94
PDPN-210ENST00000513143 SFTA3P0C7M3 94 aa9.2□□□□□ -0.94
PDPN-210ENST00000513143 RPL35AP18077 110 aaKnown RBP9.2□□□□□ -0.94
PDPN-210ENST00000513143 LEPP41159 167 aa9.2□□□□□ -0.94
PDPN-210ENST00000513143 FAM74A3Q4VXF1 159 aa9.2□□□□□ -0.94
PDPN-210ENST00000513143 SOHLH1Q5JUK2 328 aa9.2□□□□□ -0.94
PDPN-210ENST00000513143 MORN3Q6PF18 240 aaPredicted RBP9.2□□□□□ -0.94
PDPN-210ENST00000513143 LINC00322Q6ZN03 302 aaPredicted RBP9.2□□□□□ -0.94
PDPN-210ENST00000513143 BAGE2Q86Y30 109 aa9.2□□□□□ -0.94
PDPN-210ENST00000513143 ZFAND2AQ8N6M9 145 aa9.2□□□□□ -0.94
PDPN-210ENST00000513143 ASCL2Q99929 193 aa9.2□□□□□ -0.94
PDPN-210ENST00000513143 NDFIP1Q9BT67 221 aa9.2□□□□□ -0.94
PDPN-210ENST00000513143 TMEM218A2RU14 115 aa9.19□□□□□ -0.94
PDPN-210ENST00000513143 ZNF727A8MUV8 499 aa9.19□□□□□ -0.94
PDPN-210ENST00000513143 K7EIL1 84 aa9.19□□□□□ -0.94
PDPN-210ENST00000513143 TSPOP30536 169 aa9.19□□□□□ -0.94
PDPN-210ENST00000513143 CDKN1BP46527 198 aa9.19□□□□□ -0.94
PDPN-210ENST00000513143 GNG4P50150 75 aa9.19□□□□□ -0.94
PDPN-210ENST00000513143 NUTF2P61970 127 aaKnown RBP9.19□□□□□ -0.94
PDPN-210ENST00000513143 SPINK13Q1W4C9 94 aa9.19□□□□□ -0.94
PDPN-210ENST00000513143 ZNF674Q2M3X9 581 aa9.19□□□□□ -0.94
PDPN-210ENST00000513143 CENPWQ5EE01 88 aa9.19□□□□□ -0.94
PDPN-210ENST00000513143 COX8CQ7Z4L0 72 aa9.19□□□□□ -0.94
PDPN-210ENST00000513143 SLC7A5P1Q8MH63 180 aa9.19□□□□□ -0.94
PDPN-210ENST00000513143 SMIM12Q96EX1 92 aa9.19□□□□□ -0.94
PDPN-210ENST00000513143 SMIM7Q9BQ49 75 aa9.19□□□□□ -0.94
PDPN-210ENST00000513143 MLST8Q9BVC4 326 aa9.19□□□□□ -0.94
PDPN-210ENST00000513143 KIR2DL5BA0A0G2JN68 375 aa9.18□□□□□ -0.94
PDPN-210ENST00000513143 KIR2DL5BA0A0G2JPC4 375 aa9.18□□□□□ -0.94
PDPN-210ENST00000513143 KLLNB2CW77 178 aa9.18□□□□□ -0.94
PDPN-210ENST00000513143 M0R2Z0 102 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms