RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 HSPB8Q9UJY1 196 aa2.85□□□□□ -1.95
RFC1-214ENST00000512726 RFX7Q2KHR2 1363 aa2.85□□□□□ -1.95
RFC1-214ENST00000512726 PTPRFP10586 1907 aa2.84□□□□□ -1.95
RFC1-214ENST00000512726 TRBV6-4A0A1B0GX49 114 aa2.84□□□□□ -1.95
RFC1-214ENST00000512726 UQCRQO14949 82 aa2.84□□□□□ -1.95
RFC1-214ENST00000512726 HBDP02042 147 aa2.84□□□□□ -1.95
RFC1-214ENST00000512726 MT-ND4LP03901 98 aa2.84□□□□□ -1.95
RFC1-214ENST00000512726 COX7CP15954 63 aa2.84□□□□□ -1.95
RFC1-214ENST00000512726 HAGHLQ6PII5 290 aaPredicted RBP2.84□□□□□ -1.95
RFC1-214ENST00000512726 FKBP11Q9NYL4 201 aa2.84□□□□□ -1.95
RFC1-214ENST00000512726 TNRC6AQ8NDV7 1962 aaKnown RBP2.83□□□□□ -1.96
RFC1-214ENST00000512726 LOC110117498A0A087WWA1 95 aa2.83□□□□□ -1.96
RFC1-214ENST00000512726 A0A096LPI6 279 aa2.83□□□□□ -1.96
RFC1-214ENST00000512726 M0R2N4 97 aa2.83□□□□□ -1.96
RFC1-214ENST00000512726 HSD17B12Q53GQ0 312 aa2.83□□□□□ -1.96
RFC1-214ENST00000512726 LCE1CQ5T751 118 aa2.83□□□□□ -1.96
RFC1-214ENST00000512726 LCE1BQ5T7P3 118 aa2.83□□□□□ -1.96
RFC1-214ENST00000512726 TMEM244Q5VVB8 128 aa2.83□□□□□ -1.96
RFC1-214ENST00000512726 GLIPR1L1Q6UWM5 242 aa2.83□□□□□ -1.96
RFC1-214ENST00000512726 LINC00269Q8N2A0 174 aa2.83□□□□□ -1.96
RFC1-214ENST00000512726 MAGOHBQ96A72 148 aaKnown RBP2.83□□□□□ -1.96
RFC1-214ENST00000512726 FANCMQ8IYD8 2048 aa2.82□□□□□ -1.96
RFC1-214ENST00000512726 H3BRM9 83 aa2.82□□□□□ -1.96
RFC1-214ENST00000512726 INE1O15225 51 aa2.82□□□□□ -1.96
RFC1-214ENST00000512726 UNC13CQ8NB66 2214 aa2.81□□□□□ -1.96
RFC1-214ENST00000512726 GEMIN2O14893 280 aaKnown RBP2.81□□□□□ -1.96
RFC1-214ENST00000512726 TCRAP04437 139 aa2.81□□□□□ -1.96
RFC1-214ENST00000512726 OR4S1Q8NGB4 309 aa2.81□□□□□ -1.96
RFC1-214ENST00000512726 CHD3Q12873 2000 aaKnown RBP2.81□□□□□ -1.96
RFC1-214ENST00000512726 MED13Q9UHV7 2174 aa2.81□□□□□ -1.96
RFC1-214ENST00000512726 NUPR1O60356 82 aa2.8□□□□□ -1.96
RFC1-214ENST00000512726 SLC25A5P05141 298 aaKnown RBP2.8□□□□□ -1.96
RFC1-214ENST00000512726 BLCAPP62952 87 aa2.8□□□□□ -1.96
RFC1-214ENST00000512726 MIR22HGQ0VDD5 57 aa2.8□□□□□ -1.96
RFC1-214ENST00000512726 SMIM21Q3B7S5 101 aa2.8□□□□□ -1.96
RFC1-214ENST00000512726 FOXI2Q6ZQN5 318 aa2.8□□□□□ -1.96
RFC1-214ENST00000512726 NABP2Q9BQ15 211 aa2.8□□□□□ -1.96
RFC1-214ENST00000512726 FBN1P35555 2871 aaKnown RBP2.8□□□□□ -1.96
RFC1-214ENST00000512726 ALPK3Q96L96 1907 aa2.8□□□□□ -1.96
RFC1-214ENST00000512726 C3orf85A0A1B0GTC6 90 aa2.79□□□□□ -1.96
RFC1-214ENST00000512726 HMGN1P05114 100 aa2.79□□□□□ -1.96
RFC1-214ENST00000512726 SLC25A4P12235 298 aa2.79□□□□□ -1.96
RFC1-214ENST00000512726 KRTAP12-4P60329 112 aa2.79□□□□□ -1.96
RFC1-214ENST00000512726 CASC2Q6XLA1 102 aa2.79□□□□□ -1.96
RFC1-214ENST00000512726 CECR2Q9BXF3 1484 aa2.78□□□□□ -1.96
RFC1-214ENST00000512726 TRBV6-7A0A0A0MS04 114 aa2.78□□□□□ -1.96
RFC1-214ENST00000512726 SMIM24O75264 130 aa2.78□□□□□ -1.96
RFC1-214ENST00000512726 ETV6P41212 452 aa2.78□□□□□ -1.96
RFC1-214ENST00000512726 TMEM14CQ9P0S9 112 aa2.78□□□□□ -1.96
RFC1-214ENST00000512726 COPZ2Q9P299 210 aa2.78□□□□□ -1.96
RFC1-214ENST00000512726 MYO18AQ92614 2054 aaKnown RBP2.78□□□□□ -1.96
RFC1-214ENST00000512726 ADGRB2O60241 1585 aa2.78□□□□□ -1.96
RFC1-214ENST00000512726 MYH1P12882 1939 aa2.78□□□□□ -1.97
RFC1-214ENST00000512726 MUC4Q99102 2169 aa2.77□□□□□ -1.97
RFC1-214ENST00000512726 CCL25O15444 150 aa2.77□□□□□ -1.97
RFC1-214ENST00000512726 DNAL4O96015 105 aa2.77□□□□□ -1.97
RFC1-214ENST00000512726 CCL4P13236 92 aa2.77□□□□□ -1.97
RFC1-214ENST00000512726 QRFPP83859 136 aa2.77□□□□□ -1.97
RFC1-214ENST00000512726 DEFB115Q30KQ5 88 aa2.77□□□□□ -1.97
RFC1-214ENST00000512726 FAM19A2Q8N3H0 131 aa2.77□□□□□ -1.97
RFC1-214ENST00000512726 BANF2Q9H503 90 aa2.77□□□□□ -1.97
RFC1-214ENST00000512726 SIP14410 1827 aa2.77□□□□□ -1.97
RFC1-214ENST00000512726 HIST1H1BP16401 226 aaKnown RBP2.76□□□□□ -1.97
RFC1-214ENST00000512726 C10orf105Q8TEF2 133 aa2.76□□□□□ -1.97
RFC1-214ENST00000512726 CIB3Q96Q77 187 aaPredicted RBP2.76□□□□□ -1.97
RFC1-214ENST00000512726 MRPL57Q9BQC6 102 aaKnown RBP2.76□□□□□ -1.97
RFC1-214ENST00000512726 ZFP30Q9Y2G7 519 aa2.76□□□□□ -1.97
RFC1-214ENST00000512726 USP54Q70EL1 1684 aa2.76□□□□□ -1.97
RFC1-214ENST00000512726 MCM3APO60318 1980 aa2.75□□□□□ -1.97
RFC1-214ENST00000512726 ZNF25P17030 456 aaPredicted RBP2.75□□□□□ -1.97
RFC1-214ENST00000512726 HIST1H1AQ02539 215 aaPredicted RBP2.75□□□□□ -1.97
RFC1-214ENST00000512726 GDF5OSQ5U4N7 250 aa2.75□□□□□ -1.97
RFC1-214ENST00000512726 TCEAL4Q96EI5 215 aa2.75□□□□□ -1.97
RFC1-214ENST00000512726 MPC1Q9Y5U8 109 aa2.75□□□□□ -1.97
RFC1-214ENST00000512726 ZCCHC6Q5VYS8 1495 aaKnown RBP2.75□□□□□ -1.97
RFC1-214ENST00000512726 MPC1LP0DKB6 136 aa2.74□□□□□ -1.97
RFC1-214ENST00000512726 EVI2AP22794 236 aa2.74□□□□□ -1.97
RFC1-214ENST00000512726 ZCCHC23Q6ZST2 131 aa2.74□□□□□ -1.97
RFC1-214ENST00000512726 LINC00526Q96FQ7 95 aa2.74□□□□□ -1.97
RFC1-214ENST00000512726 COL1A1P02452 1464 aaPredicted RBP2.73□□□□□ -1.97
RFC1-214ENST00000512726 LOC107984156A0A0G2JMH3 177 aa2.73□□□□□ -1.97
RFC1-214ENST00000512726 PNMA8CA0A1B0GUJ8 204 aa2.73□□□□□ -1.97
RFC1-214ENST00000512726 COX4I1P13073 169 aa2.73□□□□□ -1.97
RFC1-214ENST00000512726 CKS2P33552 79 aa2.73□□□□□ -1.97
RFC1-214ENST00000512726 PCBD1P61457 104 aa2.73□□□□□ -1.97
RFC1-214ENST00000512726 LINC00322Q6ZN03 302 aaPredicted RBP2.73□□□□□ -1.97
RFC1-214ENST00000512726 TMEM91Q6ZNR0 172 aa2.73□□□□□ -1.97
RFC1-214ENST00000512726 ARL17AQ8IVW1 177 aa2.73□□□□□ -1.97
RFC1-214ENST00000512726 SMIM3Q9BZL3 60 aa2.73□□□□□ -1.97
RFC1-214ENST00000512726 FAM107BQ9H098 131 aa2.73□□□□□ -1.97
RFC1-214ENST00000512726 PRRC2BQ5JSZ5 2229 aaKnown RBP2.72□□□□□ -1.97
RFC1-214ENST00000512726 IGLV3-32A0A0A0MS00 114 aa2.72□□□□□ -1.97
RFC1-214ENST00000512726 ZNF727A8MUV8 499 aa2.72□□□□□ -1.97
RFC1-214ENST00000512726 IGHV3-33P01772 117 aa2.72□□□□□ -1.97
RFC1-214ENST00000512726 ASB16-AS1Q495Z4 193 aa2.72□□□□□ -1.97
RFC1-214ENST00000512726 OBSCN-AS1Q96MR7 158 aa2.72□□□□□ -1.97
RFC1-214ENST00000512726 CDK5RAP2Q96SN8 1893 aa2.71□□□□□ -1.98
RFC1-214ENST00000512726 KDM5CP41229 1560 aa2.71□□□□□ -1.98
RFC1-214ENST00000512726 CASP8AP2Q9UKL3 1982 aa2.71□□□□□ -1.98
RFC1-214ENST00000512726 OVOS2A0A0J9YW53 1432 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms