RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 Q6ZR54 194 aa8.43□□□□□ -1.06
CDK7-208ENST00000512687 FAM19A4Q96LR4 140 aa8.43□□□□□ -1.06
CDK7-208ENST00000512687 IGKV2-40A0A087WW87 121 aaPredicted RBP8.42□□□□□ -1.06
CDK7-208ENST00000512687 CBY3A6NI87 242 aa8.42□□□□□ -1.06
CDK7-208ENST00000512687 MPC2O95563 127 aa8.42□□□□□ -1.06
CDK7-208ENST00000512687 IGKV2D-40P01614 121 aaPredicted RBP8.42□□□□□ -1.06
CDK7-208ENST00000512687 ATP5G1P05496 136 aa8.42□□□□□ -1.06
CDK7-208ENST00000512687 ATP5G3P48201 142 aa8.42□□□□□ -1.06
CDK7-208ENST00000512687 CYCSP99999 105 aaKnown RBP8.42□□□□□ -1.06
CDK7-208ENST00000512687 PDE6HQ13956 83 aa8.42□□□□□ -1.06
CDK7-208ENST00000512687 LGALS9BQ3B8N2 356 aa8.42□□□□□ -1.06
CDK7-208ENST00000512687 RNF212Q495C1 297 aa8.42□□□□□ -1.06
CDK7-208ENST00000512687 PRR9Q5T870 116 aa8.42□□□□□ -1.06
CDK7-208ENST00000512687 ZNF493Q6ZR52 646 aa8.42□□□□□ -1.06
CDK7-208ENST00000512687 LINC00612Q8N6U2 182 aa8.42□□□□□ -1.06
CDK7-208ENST00000512687 C15orf53Q8NAA6 179 aa8.42□□□□□ -1.06
CDK7-208ENST00000512687 ZNF503Q96F45 646 aa8.42□□□□□ -1.06
CDK7-208ENST00000512687 ATP5SQ99766 215 aa8.42□□□□□ -1.06
CDK7-208ENST00000512687 AGPAT4-IT1Q9H0P7 198 aa8.42□□□□□ -1.06
CDK7-208ENST00000512687 HSPB11Q9Y547 144 aa8.42□□□□□ -1.06
CDK7-208ENST00000512687 TIMM9Q9Y5J7 89 aa8.42□□□□□ -1.06
CDK7-208ENST00000512687 MUC4Q99102 2169 aa8.42□□□□□ -1.06
CDK7-208ENST00000512687 DYNC1H1Q14204 4646 aaKnown RBP8.42□□□□□ -1.06
CDK7-208ENST00000512687 KLLNB2CW77 178 aa8.41□□□□□ -1.06
CDK7-208ENST00000512687 SSNA1O43805 119 aa8.41□□□□□ -1.06
CDK7-208ENST00000512687 OR10J4P0C629 311 aa8.41□□□□□ -1.06
CDK7-208ENST00000512687 DEFA1P59665 94 aa8.41□□□□□ -1.06
CDK7-208ENST00000512687 DEFA3P59666 94 aa8.41□□□□□ -1.06
CDK7-208ENST00000512687 CD300CQ08708 224 aa8.41□□□□□ -1.06
CDK7-208ENST00000512687 BTN1A1Q13410 526 aa8.41□□□□□ -1.06
CDK7-208ENST00000512687 ICAM4Q14773 271 aa8.41□□□□□ -1.06
CDK7-208ENST00000512687 FAM122CQ6P4D5 195 aa8.41□□□□□ -1.06
CDK7-208ENST00000512687 LINC00336Q6ZUF6 198 aa8.41□□□□□ -1.06
CDK7-208ENST00000512687 FXYD5Q96DB9 178 aa8.41□□□□□ -1.06
CDK7-208ENST00000512687 PHYHIPLQ96FC7 376 aa8.41□□□□□ -1.06
CDK7-208ENST00000512687 KRTAP17-1Q9BYP8 105 aa8.41□□□□□ -1.06
CDK7-208ENST00000512687 SMIM3Q9BZL3 60 aa8.41□□□□□ -1.06
CDK7-208ENST00000512687 OR51M1Q9H341 326 aa8.41□□□□□ -1.06
CDK7-208ENST00000512687 MBD2Q9UBB5 411 aa8.41□□□□□ -1.06
CDK7-208ENST00000512687 PRELID1Q9Y255 219 aa8.41□□□□□ -1.06
CDK7-208ENST00000512687 KIAA1109Q2LD37 5005 aa8.41□□□□□ -1.06
CDK7-208ENST00000512687 C7orf71A4D174 169 aa8.4□□□□□ -1.06
CDK7-208ENST00000512687 ZNF324O75467 553 aaPredicted RBP8.4□□□□□ -1.06
CDK7-208ENST00000512687 EIF3GO75821 320 aaKnown RBP eCLIP8.4□□□□□ -1.06
CDK7-208ENST00000512687 NUDT3O95989 172 aa8.4□□□□□ -1.06
CDK7-208ENST00000512687 NBEAP1P0C6P0 100 aa8.4□□□□□ -1.06
CDK7-208ENST00000512687 Q6ZQT7 251 aa8.4□□□□□ -1.06
CDK7-208ENST00000512687 C9orf47Q6ZRZ4 202 aa8.4□□□□□ -1.06
CDK7-208ENST00000512687 VGLL1Q99990 258 aa8.4□□□□□ -1.06
CDK7-208ENST00000512687 PAXXQ9BUH6 204 aa8.4□□□□□ -1.06
CDK7-208ENST00000512687 MRPL32Q9BYC8 188 aaKnown RBP8.4□□□□□ -1.06
CDK7-208ENST00000512687 WFDC1Q9HC57 220 aa8.4□□□□□ -1.06
CDK7-208ENST00000512687 FUT9Q9Y231 359 aa8.4□□□□□ -1.06
CDK7-208ENST00000512687 GAGE12BA1L429 117 aa8.39□□□□□ -1.07
CDK7-208ENST00000512687 PRSS29PA6NIE9 313 aa8.39□□□□□ -1.07
CDK7-208ENST00000512687 GAGE7O76087 117 aa8.39□□□□□ -1.07
CDK7-208ENST00000512687 SLC25A5P05141 298 aaKnown RBP8.39□□□□□ -1.07
CDK7-208ENST00000512687 GAGE12FP0CL80 117 aa8.39□□□□□ -1.07
CDK7-208ENST00000512687 GAGE12GP0CL81 117 aa8.39□□□□□ -1.07
CDK7-208ENST00000512687 GAGE12IP0CL82 117 aa8.39□□□□□ -1.07
CDK7-208ENST00000512687 CRISP2P16562 243 aa8.39□□□□□ -1.07
CDK7-208ENST00000512687 HOXA5P20719 270 aa8.39□□□□□ -1.07
CDK7-208ENST00000512687 RPL12P30050 165 aaKnown RBP8.39□□□□□ -1.07
CDK7-208ENST00000512687 FFAR4Q5NUL3 377 aa8.39□□□□□ -1.07
CDK7-208ENST00000512687 CCDC28AQ8IWP9 274 aa8.39□□□□□ -1.07
CDK7-208ENST00000512687 ZFAND2AQ8N6M9 145 aa8.39□□□□□ -1.07
CDK7-208ENST00000512687 C11orf72Q8NBR9 251 aa8.39□□□□□ -1.07
CDK7-208ENST00000512687 LINC00477Q96M19 166 aa8.39□□□□□ -1.07
CDK7-208ENST00000512687 PYGO2Q9BRQ0 406 aa8.39□□□□□ -1.07
CDK7-208ENST00000512687 AAMDCQ9H7C9 122 aa8.39□□□□□ -1.07
CDK7-208ENST00000512687 KCNIP2Q9NS61 270 aa8.39□□□□□ -1.07
CDK7-208ENST00000512687 ALG5Q9Y673 324 aa8.39□□□□□ -1.07
CDK7-208ENST00000512687 DNAH11Q96DT5 4516 aa8.38□□□□□ -1.07
CDK7-208ENST00000512687 SNURFLB1AK76 121 aa8.38□□□□□ -1.07
CDK7-208ENST00000512687 C17orf112F2Z3M2 114 aa8.38□□□□□ -1.07
CDK7-208ENST00000512687 OR7C2O60412 319 aa8.38□□□□□ -1.07
CDK7-208ENST00000512687 PET100P0DJ07 73 aa8.38□□□□□ -1.07
CDK7-208ENST00000512687 Q6ZTI0 123 aa8.38□□□□□ -1.07
CDK7-208ENST00000512687 ZNRF2Q8NHG8 242 aa8.38□□□□□ -1.07
CDK7-208ENST00000512687 Q8TAT8 98 aa8.38□□□□□ -1.07
CDK7-208ENST00000512687 TMPRSS5Q9H3S3 457 aa8.38□□□□□ -1.07
CDK7-208ENST00000512687 GSN-AS1Q9NRJ2 163 aa8.38□□□□□ -1.07
CDK7-208ENST00000512687 TMA7Q9Y2S6 64 aaKnown RBP8.38□□□□□ -1.07
CDK7-208ENST00000512687 RNASE4P34096 147 aaKnown RBP8.37□□□□□ -1.07
CDK7-208ENST00000512687 DAZ2Q13117 558 aaKnown RBP8.37□□□□□ -1.07
CDK7-208ENST00000512687 LINC00467Q9BRT7 94 aa8.37□□□□□ -1.07
CDK7-208ENST00000512687 ATG101Q9BSB4 218 aa8.37□□□□□ -1.07
CDK7-208ENST00000512687 Q9H3A6 140 aa8.37□□□□□ -1.07
CDK7-208ENST00000512687 BATF3Q9NR55 127 aa8.37□□□□□ -1.07
CDK7-208ENST00000512687 ZNF492Q9P255 531 aa8.37□□□□□ -1.07
CDK7-208ENST00000512687 TP53TG3Q9ULZ0 132 aa8.37□□□□□ -1.07
CDK7-208ENST00000512687 LINC00588Q9Y4M8 146 aa8.37□□□□□ -1.07
CDK7-208ENST00000512687 TRAV26-1A0A087WT03 109 aa8.36□□□□□ -1.07
CDK7-208ENST00000512687 A0A0J9YY99 117 aa8.36□□□□□ -1.07
CDK7-208ENST00000512687 FAM3BP58499 235 aaPredicted RBP8.36□□□□□ -1.07
CDK7-208ENST00000512687 UBE2L3P68036 154 aaKnown RBP8.36□□□□□ -1.07
CDK7-208ENST00000512687 OR5I1Q13606 314 aa8.36□□□□□ -1.07
CDK7-208ENST00000512687 TMEM78Q5T7P6 136 aa8.36□□□□□ -1.07
CDK7-208ENST00000512687 EIF4E3Q8N5X7 224 aaKnown RBP8.36□□□□□ -1.07
CDK7-208ENST00000512687 KLF12Q9Y4X4 402 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms