RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 ARL16Q0P5N6 197 aa12.6□□□□□ -0.39
HMGCS1-206ENST00000511774 PPP1R1AQ13522 171 aa12.6□□□□□ -0.39
HMGCS1-206ENST00000511774 LINC01620Q4KN68 170 aa12.6□□□□□ -0.39
HMGCS1-206ENST00000511774 SCXQ7RTU7 201 aa12.6□□□□□ -0.39
HMGCS1-206ENST00000511774 NPVFQ9HCQ7 196 aa12.6□□□□□ -0.39
HMGCS1-206ENST00000511774 TRGV4A0A0C4DH28 118 aa12.59□□□□□ -0.39
HMGCS1-206ENST00000511774 IBA57-AS1B1ANH7 110 aa12.59□□□□□ -0.39
HMGCS1-206ENST00000511774 AGPAT2O15120 278 aa12.59□□□□□ -0.39
HMGCS1-206ENST00000511774 MPDU1O75352 247 aa12.59□□□□□ -0.39
HMGCS1-206ENST00000511774 OR4E1P0C645 316 aa12.59□□□□□ -0.39
HMGCS1-206ENST00000511774 TMEM14EPQ6UXP3 125 aa12.59□□□□□ -0.39
HMGCS1-206ENST00000511774 S100A7AQ86SG5 101 aa12.59□□□□□ -0.39
HMGCS1-206ENST00000511774 ZFAND2AQ8N6M9 145 aa12.59□□□□□ -0.39
HMGCS1-206ENST00000511774 CCDC59Q9P031 241 aaKnown RBP12.59□□□□□ -0.39
HMGCS1-206ENST00000511774 GOSR2O14653 212 aa12.58□□□□□ -0.4
HMGCS1-206ENST00000511774 COX7A2P2O60397 106 aa12.58□□□□□ -0.4
HMGCS1-206ENST00000511774 SFT2D2O95562 160 aa12.58□□□□□ -0.4
HMGCS1-206ENST00000511774 PXDC1Q5TGL8 231 aa12.58□□□□□ -0.4
HMGCS1-206ENST00000511774 IQCF2Q8IXL9 164 aa12.58□□□□□ -0.4
HMGCS1-206ENST00000511774 DIRAS2Q96HU8 199 aa12.58□□□□□ -0.4
HMGCS1-206ENST00000511774 MGST2Q99735 147 aa12.58□□□□□ -0.4
HMGCS1-206ENST00000511774 IGHV3-38A0A0C4DH36 116 aa12.57□□□□□ -0.4
HMGCS1-206ENST00000511774 FNDC10F2Z333 226 aa12.57□□□□□ -0.4
HMGCS1-206ENST00000511774 SSSCA1O60232 199 aa12.57□□□□□ -0.4
HMGCS1-206ENST00000511774 CRISP2P16562 243 aa12.57□□□□□ -0.4
HMGCS1-206ENST00000511774 ZNF546Q86UE3 836 aa12.57□□□□□ -0.4
HMGCS1-206ENST00000511774 RNF24Q9Y225 148 aa12.57□□□□□ -0.4
HMGCS1-206ENST00000511774 IGHV1OR15-1A0A075B7D0 117 aa12.56□□□□□ -0.4
HMGCS1-206ENST00000511774 PIGBOS1A0A0B4J2F0 54 aa12.56□□□□□ -0.4
HMGCS1-206ENST00000511774 RGS13O14921 159 aa12.56□□□□□ -0.4
HMGCS1-206ENST00000511774 NDUFB4O95168 129 aa12.56□□□□□ -0.4
HMGCS1-206ENST00000511774 SPCS2Q15005 226 aa12.56□□□□□ -0.4
HMGCS1-206ENST00000511774 LINC01556Q5JQF7 62 aa12.56□□□□□ -0.4
HMGCS1-206ENST00000511774 C10orf113Q5VZT2 155 aa12.56□□□□□ -0.4
HMGCS1-206ENST00000511774 BLNKQ8WV28 456 aa12.56□□□□□ -0.4
HMGCS1-206ENST00000511774 SMIM8Q96KF7 97 aa12.56□□□□□ -0.4
HMGCS1-206ENST00000511774 GPX1P07203 203 aa12.55□□□□□ -0.4
HMGCS1-206ENST00000511774 OR10P1Q8NGE3 313 aa12.55□□□□□ -0.4
HMGCS1-206ENST00000511774 OR10G4Q8NGN3 311 aa12.55□□□□□ -0.4
HMGCS1-206ENST00000511774 RAB2BQ8WUD1 216 aa12.55□□□□□ -0.4
HMGCS1-206ENST00000511774 LINC00477Q96M19 166 aa12.55□□□□□ -0.4
HMGCS1-206ENST00000511774 IGKV2-40A0A087WW87 121 aaPredicted RBP12.54□□□□□ -0.4
HMGCS1-206ENST00000511774 LECT2O14960 151 aa12.54□□□□□ -0.4
HMGCS1-206ENST00000511774 IGKV2D-40P01614 121 aaPredicted RBP12.54□□□□□ -0.4
HMGCS1-206ENST00000511774 PCNPQ8WW12 178 aaKnown RBP12.54□□□□□ -0.4
HMGCS1-206ENST00000511774 MRPL53Q96EL3 112 aaKnown RBP12.54□□□□□ -0.4
HMGCS1-206ENST00000511774 SOSTQ9BQB4 213 aa12.54□□□□□ -0.4
HMGCS1-206ENST00000511774 MGAT4CQ9UBM8 478 aa12.54□□□□□ -0.4
HMGCS1-206ENST00000511774 TRBV19A0A075B6N1 114 aa12.53□□□□□ -0.4
HMGCS1-206ENST00000511774 ORM1P02763 201 aa12.53□□□□□ -0.4
HMGCS1-206ENST00000511774 GUK1Q16774 197 aa12.53□□□□□ -0.4
HMGCS1-206ENST00000511774 ARPC5LQ9BPX5 153 aa12.53□□□□□ -0.4
HMGCS1-206ENST00000511774 TXNDC17Q9BRA2 123 aa12.53□□□□□ -0.4
HMGCS1-206ENST00000511774 TNXBP22105 4242 aa12.53□□□□□ -0.4
HMGCS1-206ENST00000511774 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.52□□□□□ -0.41
HMGCS1-206ENST00000511774 ZNF253O75346 499 aa12.52□□□□□ -0.41
HMGCS1-206ENST00000511774 IGHV3-30P01768 117 aa12.52□□□□□ -0.41
HMGCS1-206ENST00000511774 IGHV3-33P01772 117 aa12.52□□□□□ -0.41
HMGCS1-206ENST00000511774 IGHV3-30-3P0DP02 117 aa12.52□□□□□ -0.41
HMGCS1-206ENST00000511774 IGHV3-30-5P0DP03 117 aa12.52□□□□□ -0.41
HMGCS1-206ENST00000511774 HNRNPA3P51991 378 aaKnown RBP12.52□□□□□ -0.41
HMGCS1-206ENST00000511774 MIC13Q5XKP0 118 aa12.52□□□□□ -0.41
HMGCS1-206ENST00000511774 C9orf47Q6ZRZ4 202 aa12.52□□□□□ -0.41
HMGCS1-206ENST00000511774 EXOC3-AS1Q8N2X6 119 aa12.52□□□□□ -0.41
HMGCS1-206ENST00000511774 Q8N3U1 123 aa12.52□□□□□ -0.41
HMGCS1-206ENST00000511774 DNAJC4Q9NNZ3 241 aa12.52□□□□□ -0.41
HMGCS1-206ENST00000511774 SMIM18P0DKX4 95 aa12.51□□□□□ -0.41
HMGCS1-206ENST00000511774 TIRAPP58753 221 aa12.51□□□□□ -0.41
HMGCS1-206ENST00000511774 MUC21Q5SSG8 566 aa12.51□□□□□ -0.41
HMGCS1-206ENST00000511774 RASL10AQ92737 203 aa12.51□□□□□ -0.41
HMGCS1-206ENST00000511774 TRIM63Q969Q1 353 aa12.51□□□□□ -0.41
HMGCS1-206ENST00000511774 C9JCJ5 164 aa12.5□□□□□ -0.41
HMGCS1-206ENST00000511774 RSL24D1Q9UHA3 163 aaKnown RBP12.5□□□□□ -0.41
HMGCS1-206ENST00000511774 NMBP08949 121 aa12.49□□□□□ -0.41
HMGCS1-206ENST00000511774 PYYP10082 97 aa12.49□□□□□ -0.41
HMGCS1-206ENST00000511774 Q8TAT8 98 aa12.49□□□□□ -0.41
HMGCS1-206ENST00000511774 CIRBP-AS1Q8TBR5 109 aa12.49□□□□□ -0.41
HMGCS1-206ENST00000511774 CHAC1Q9BUX1 264 aa12.49□□□□□ -0.41
HMGCS1-206ENST00000511774 SLC25A31Q9H0C2 315 aa12.49□□□□□ -0.41
HMGCS1-206ENST00000511774 RABL2AQ9UBK7 228 aaPredicted RBP12.49□□□□□ -0.41
HMGCS1-206ENST00000511774 MT1HL1P0DM35 61 aa12.48□□□□□ -0.41
HMGCS1-206ENST00000511774 ZNF846Q147U1 533 aa12.48□□□□□ -0.41
HMGCS1-206ENST00000511774 MCFD2Q8NI22 146 aa12.48□□□□□ -0.41
HMGCS1-206ENST00000511774 ZNF492Q9P255 531 aa12.48□□□□□ -0.41
HMGCS1-206ENST00000511774 IGHV3-16A0A0C4DH30 117 aa12.47□□□□□ -0.41
HMGCS1-206ENST00000511774 C9orf170A2RU37 121 aa12.47□□□□□ -0.41
HMGCS1-206ENST00000511774 TSC22D2O75157 780 aa12.47□□□□□ -0.41
HMGCS1-206ENST00000511774 CAMLGP49069 296 aa12.47□□□□□ -0.41
HMGCS1-206ENST00000511774 PPT1P50897 306 aa12.47□□□□□ -0.41
HMGCS1-206ENST00000511774 NRARPQ7Z6K4 114 aa12.47□□□□□ -0.41
HMGCS1-206ENST00000511774 NHLRC2Q8NBF2 726 aa12.47□□□□□ -0.41
HMGCS1-206ENST00000511774 SRRQ9GZT4 340 aa12.47□□□□□ -0.41
HMGCS1-206ENST00000511774 PRELID1Q9Y255 219 aa12.47□□□□□ -0.41
HMGCS1-206ENST00000511774 TRAV4A0A0B4J268 109 aa12.46□□□□□ -0.41
HMGCS1-206ENST00000511774 SCGB1D2O95969 90 aa12.46□□□□□ -0.41
HMGCS1-206ENST00000511774 TNFSF8P32971 234 aa12.46□□□□□ -0.41
HMGCS1-206ENST00000511774 FAM122CQ6P4D5 195 aa12.46□□□□□ -0.41
HMGCS1-206ENST00000511774 DYNC2LI1Q8TCX1 351 aa12.46□□□□□ -0.41
HMGCS1-206ENST00000511774 SLC25A21Q9BQT8 299 aaPredicted RBP12.46□□□□□ -0.41
HMGCS1-206ENST00000511774 GGACTQ9BVM4 153 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms