RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 EGR2P11161 476 aaPredicted RBP4.65□□□□□ -1.67
USP38-203ENST00000511739 KIAA1671Q9BY89 1806 aa4.65□□□□□ -1.67
USP38-203ENST00000511739 ID3Q02535 119 aa4.65□□□□□ -1.67
USP38-203ENST00000511739 LINC00518Q8N0U6 118 aa4.65□□□□□ -1.67
USP38-203ENST00000511739 ATP6V0BQ99437 205 aa4.65□□□□□ -1.67
USP38-203ENST00000511739 NOP10Q9NPE3 64 aaKnown RBP4.65□□□□□ -1.67
USP38-203ENST00000511739 ICOSQ9Y6W8 199 aa4.65□□□□□ -1.67
USP38-203ENST00000511739 TRAV12-1A0A0B4J245 112 aa4.65□□□□□ -1.67
USP38-203ENST00000511739 CRYGCP07315 174 aa4.65□□□□□ -1.67
USP38-203ENST00000511739 XCL1P47992 114 aa4.65□□□□□ -1.67
USP38-203ENST00000511739 Q5BKY6 102 aa4.65□□□□□ -1.67
USP38-203ENST00000511739 PRR31Q5SQ13 230 aa4.65□□□□□ -1.67
USP38-203ENST00000511739 ZC2HC1BQ5TFG8 222 aa4.65□□□□□ -1.67
USP38-203ENST00000511739 C8orf49Q96NF6 230 aa4.65□□□□□ -1.67
USP38-203ENST00000511739 GTF3C1Q12789 2109 aa4.65□□□□□ -1.67
USP38-203ENST00000511739 FHL1Q13642 323 aa4.64□□□□□ -1.67
USP38-203ENST00000511739 PDE6HQ13956 83 aa4.64□□□□□ -1.67
USP38-203ENST00000511739 MESP1Q9BRJ9 268 aa4.64□□□□□ -1.67
USP38-203ENST00000511739 LRRK1Q38SD2 2015 aa4.64□□□□□ -1.67
USP38-203ENST00000511739 C9JAW5 83 aa4.64□□□□□ -1.67
USP38-203ENST00000511739 MRPL23Q16540 153 aaKnown RBP4.64□□□□□ -1.67
USP38-203ENST00000511739 AMN1Q8IY45 258 aa4.64□□□□□ -1.67
USP38-203ENST00000511739 CAMK2N2Q96S95 79 aa4.64□□□□□ -1.67
USP38-203ENST00000511739 SHANK2-AS3Q9BTD1 123 aa4.64□□□□□ -1.67
USP38-203ENST00000511739 IGKV1D-17A0A075B6S4 117 aa4.64□□□□□ -1.67
USP38-203ENST00000511739 GUSBP1Q15486 140 aa4.64□□□□□ -1.67
USP38-203ENST00000511739 Q6ZWC4 215 aa4.64□□□□□ -1.67
USP38-203ENST00000511739 TMEM141Q96I45 108 aa4.64□□□□□ -1.67
USP38-203ENST00000511739 WNK2Q9Y3S1 2297 aa4.64□□□□□ -1.67
USP38-203ENST00000511739 NBL1P41271 181 aa4.64□□□□□ -1.67
USP38-203ENST00000511739 GPHB5Q86YW7 130 aa4.64□□□□□ -1.67
USP38-203ENST00000511739 GFI1Q99684 422 aa4.64□□□□□ -1.67
USP38-203ENST00000511739 TMEM14BQ9NUH8 114 aa4.64□□□□□ -1.67
USP38-203ENST00000511739 VPREB3Q9UKI3 123 aa4.64□□□□□ -1.67
USP38-203ENST00000511739 CREBBPQ92793 2442 aa4.64□□□□□ -1.67
USP38-203ENST00000511739 IGHG4P01861 327 aa4.64□□□□□ -1.67
USP38-203ENST00000511739 ATP5G1P05496 136 aa4.64□□□□□ -1.67
USP38-203ENST00000511739 FOXL2NBQ6ZUU3 175 aa4.64□□□□□ -1.67
USP38-203ENST00000511739 AGMATQ9BSE5 352 aa4.64□□□□□ -1.67
USP38-203ENST00000511739 IGKV1-12A0A0C4DH73 117 aa4.63□□□□□ -1.67
USP38-203ENST00000511739 PRB1P04280 392 aa4.63□□□□□ -1.67
USP38-203ENST00000511739 CEP350Q5VT06 3117 aa4.63□□□□□ -1.67
USP38-203ENST00000511739 DOCK9Q9BZ29 2069 aa4.63□□□□□ -1.67
USP38-203ENST00000511739 DEFB112Q30KQ8 113 aa4.63□□□□□ -1.67
USP38-203ENST00000511739 RNF183Q96D59 192 aa4.63□□□□□ -1.67
USP38-203ENST00000511739 NAA38Q9BRA0 125 aaKnown RBP4.63□□□□□ -1.67
USP38-203ENST00000511739 SDHAF1A6NFY7 115 aa4.63□□□□□ -1.67
USP38-203ENST00000511739 IGHV3-30P01768 117 aa4.63□□□□□ -1.67
USP38-203ENST00000511739 IGHV3-33P01772 117 aa4.63□□□□□ -1.67
USP38-203ENST00000511739 IGHV3-30-3P0DP02 117 aa4.63□□□□□ -1.67
USP38-203ENST00000511739 IGHV3-30-5P0DP03 117 aa4.63□□□□□ -1.67
USP38-203ENST00000511739 PLXND1Q9Y4D7 1925 aa4.63□□□□□ -1.67
USP38-203ENST00000511739 FUSP35637 526 aaKnown RBP eCLIP4.63□□□□□ -1.67
USP38-203ENST00000511739 C1orf194Q5T5A4 169 aa4.63□□□□□ -1.67
USP38-203ENST00000511739 C8orf86Q6ZUL3 223 aa4.63□□□□□ -1.67
USP38-203ENST00000511739 HEATR5AQ86XA9 2040 aa4.63□□□□□ -1.67
USP38-203ENST00000511739 ROS1P08922 2347 aa4.63□□□□□ -1.67
USP38-203ENST00000511739 IGHV4-4A0A075B6R2 117 aa4.63□□□□□ -1.67
USP38-203ENST00000511739 HERVK_113P63121 156 aa4.63□□□□□ -1.67
USP38-203ENST00000511739 SH2D6Q7Z4S9 175 aa4.63□□□□□ -1.67
USP38-203ENST00000511739 VSIRQ9H7M9 311 aa4.63□□□□□ -1.67
USP38-203ENST00000511739 NBASA2RRP1 2371 aa4.62□□□□□ -1.67
USP38-203ENST00000511739 TRAV13-2A0A0B4J235 113 aa4.62□□□□□ -1.67
USP38-203ENST00000511739 RNASE2P10153 161 aaKnown RBP4.62□□□□□ -1.67
USP38-203ENST00000511739 C5orf47Q569G3 176 aa4.62□□□□□ -1.67
USP38-203ENST00000511739 C2orf66Q6UXQ4 117 aa4.62□□□□□ -1.67
USP38-203ENST00000511739 NUP35Q8NFH5 326 aa4.62□□□□□ -1.67
USP38-203ENST00000511739 RSPO3Q9BXY4 272 aaPredicted RBP4.62□□□□□ -1.67
USP38-203ENST00000511739 SMAD5-AS1Q9Y6J3 95 aa4.62□□□□□ -1.67
USP38-203ENST00000511739 C2orf16Q68DN1 1984 aa4.62□□□□□ -1.67
USP38-203ENST00000511739 YPEL3P61236 119 aaPredicted RBP4.62□□□□□ -1.67
USP38-203ENST00000511739 STPG4Q8N801 248 aa4.62□□□□□ -1.67
USP38-203ENST00000511739 HS3ST6Q96QI5 342 aa4.62□□□□□ -1.67
USP38-203ENST00000511739 PCNX1Q96RV3 2341 aa4.62□□□□□ -1.67
USP38-203ENST00000511739 A0A1W2PPI3 338 aa4.62□□□□□ -1.67
USP38-203ENST00000511739 FGF16O43320 207 aa4.62□□□□□ -1.67
USP38-203ENST00000511739 IGHV4-59P01825 116 aa4.62□□□□□ -1.67
USP38-203ENST00000511739 SEC61GP60059 68 aa4.62□□□□□ -1.67
USP38-203ENST00000511739 HGFACQ04756 655 aa4.62□□□□□ -1.67
USP38-203ENST00000511739 TCF15Q12870 199 aa4.62□□□□□ -1.67
USP38-203ENST00000511739 NMSQ5H8A3 153 aa4.62□□□□□ -1.67
USP38-203ENST00000511739 BAALCQ8WXS3 180 aa4.62□□□□□ -1.67
USP38-203ENST00000511739 CARHSP1Q9Y2V2 147 aaKnown RBP4.62□□□□□ -1.67
USP38-203ENST00000511739 NDUFA12Q9UI09 145 aa4.62□□□□□ -1.67
USP38-203ENST00000511739 TP53BP1Q12888 1972 aaPredicted RBP4.62□□□□□ -1.67
USP38-203ENST00000511739 MPDZO75970 2070 aa4.62□□□□□ -1.67
USP38-203ENST00000511739 PLCE1Q9P212 2302 aa4.62□□□□□ -1.67
USP38-203ENST00000511739 IGHV7-4-1A0A0J9YVY3 117 aa4.62□□□□□ -1.67
USP38-203ENST00000511739 LINC00473A8K010 186 aa4.62□□□□□ -1.67
USP38-203ENST00000511739 IGLL5B9A064 214 aa4.62□□□□□ -1.67
USP38-203ENST00000511739 TMEM258P61165 79 aa4.62□□□□□ -1.67
USP38-203ENST00000511739 Q86TA4 180 aa4.62□□□□□ -1.67
USP38-203ENST00000511739 PRSS33Q8NF86 280 aa4.62□□□□□ -1.67
USP38-203ENST00000511739 KIF26AQ9ULI4 1882 aaPredicted RBP4.62□□□□□ -1.67
USP38-203ENST00000511739 DENND4AQ7Z401 1863 aa4.61□□□□□ -1.67
USP38-203ENST00000511739 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.61□□□□□ -1.672e-18■■■■■ 68.3
USP38-203ENST00000511739 IGKV1-16P04430 117 aa4.61□□□□□ -1.67
USP38-203ENST00000511739 MRPL36Q9P0J6 103 aaKnown RBP4.61□□□□□ -1.67
USP38-203ENST00000511739 U3KQE9 123 aa4.61□□□□□ -1.67
USP38-203ENST00000511739 FER1L5A0AVI2 2057 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms