RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 HYLS1Q96M11 299 aa9.98□□□□□ -0.81
DDX41-212ENST00000511040 ODF3Q96PU9 254 aa9.98□□□□□ -0.81
DDX41-212ENST00000511040 HYDINQ4G0P3 5121 aa9.98□□□□□ -0.81
DDX41-212ENST00000511040 DNAH1Q9P2D7 4330 aa9.98□□□□□ -0.81
DDX41-212ENST00000511040 DEFB131BA0A096LNP1 70 aa9.97□□□□□ -0.81
DDX41-212ENST00000511040 C11orf94C9JXX5 98 aa9.97□□□□□ -0.81
DDX41-212ENST00000511040 LY6G6CO95867 125 aa9.97□□□□□ -0.81
DDX41-212ENST00000511040 CSN1S1P47710 185 aa9.97□□□□□ -0.81
DDX41-212ENST00000511040 TAS2R60P59551 318 aa9.97□□□□□ -0.81
DDX41-212ENST00000511040 PQLC2Q6ZP29 291 aa9.97□□□□□ -0.81
DDX41-212ENST00000511040 C9orf47Q6ZRZ4 202 aa9.97□□□□□ -0.81
DDX41-212ENST00000511040 OR11H4Q8NGC9 324 aa9.97□□□□□ -0.81
DDX41-212ENST00000511040 Q8TAT8 98 aa9.97□□□□□ -0.81
DDX41-212ENST00000511040 LINC00476Q8WZB0 136 aa9.97□□□□□ -0.81
DDX41-212ENST00000511040 RAB24Q969Q5 203 aa9.97□□□□□ -0.81
DDX41-212ENST00000511040 GNPNAT1Q96EK6 184 aaPredicted RBP9.97□□□□□ -0.81
DDX41-212ENST00000511040 LINC00477Q96M19 166 aa9.97□□□□□ -0.81
DDX41-212ENST00000511040 NIPSNAP3BQ9BS92 247 aa9.97□□□□□ -0.81
DDX41-212ENST00000511040 CYTL1Q9NRR1 136 aa9.97□□□□□ -0.81
DDX41-212ENST00000511040 RPH3ALQ9UNE2 315 aa9.97□□□□□ -0.81
DDX41-212ENST00000511040 PLAC8L1A1L4L8 177 aa9.96□□□□□ -0.82
DDX41-212ENST00000511040 PGPA6NDG6 321 aa9.96□□□□□ -0.82
DDX41-212ENST00000511040 MBP02144 154 aa9.96□□□□□ -0.82
DDX41-212ENST00000511040 HTN3P15516 51 aa9.96□□□□□ -0.82
DDX41-212ENST00000511040 RNASE4P34096 147 aaKnown RBP9.96□□□□□ -0.82
DDX41-212ENST00000511040 SERF2P84101 59 aa9.96□□□□□ -0.82
DDX41-212ENST00000511040 BTN1A1Q13410 526 aa9.96□□□□□ -0.82
DDX41-212ENST00000511040 TMEM78Q5T7P6 136 aa9.96□□□□□ -0.82
DDX41-212ENST00000511040 SSX7Q7RTT5 188 aa9.96□□□□□ -0.82
DDX41-212ENST00000511040 AKAP14Q86UN6 197 aa9.96□□□□□ -0.82
DDX41-212ENST00000511040 LYPD1Q8N2G4 141 aa9.96□□□□□ -0.82
DDX41-212ENST00000511040 FAM19A4Q96LR4 140 aa9.96□□□□□ -0.82
DDX41-212ENST00000511040 ACTR3CQ9C0K3 210 aaPredicted RBP9.96□□□□□ -0.82
DDX41-212ENST00000511040 OTORQ9NRC9 128 aa9.96□□□□□ -0.82
DDX41-212ENST00000511040 C7orf71A4D174 169 aa9.95□□□□□ -0.82
DDX41-212ENST00000511040 H7BYZ3 331 aa9.95□□□□□ -0.82
DDX41-212ENST00000511040 STAG3L2P0CL84 134 aa9.95□□□□□ -0.82
DDX41-212ENST00000511040 STAG3L3P0CL85 134 aa9.95□□□□□ -0.82
DDX41-212ENST00000511040 GCHFRP30047 84 aa9.95□□□□□ -0.82
DDX41-212ENST00000511040 TCTE3Q8IZS6 198 aa9.95□□□□□ -0.82
DDX41-212ENST00000511040 C20orf144Q9BQM9 153 aa9.95□□□□□ -0.82
DDX41-212ENST00000511040 ZNF492Q9P255 531 aa9.95□□□□□ -0.82
DDX41-212ENST00000511040 IGHV4-4A0A075B6R2 117 aa9.94□□□□□ -0.82
DDX41-212ENST00000511040 TEX48A0A1B0GUV7 120 aa9.94□□□□□ -0.82
DDX41-212ENST00000511040 KLLNB2CW77 178 aa9.94□□□□□ -0.82
DDX41-212ENST00000511040 DIRC3C9JPN6 131 aa9.94□□□□□ -0.82
DDX41-212ENST00000511040 TAAR5O14804 337 aa9.94□□□□□ -0.82
DDX41-212ENST00000511040 SLC25A5P05141 298 aaKnown RBP9.94□□□□□ -0.82
DDX41-212ENST00000511040 DEFB130BP0DP73 79 aa9.94□□□□□ -0.82
DDX41-212ENST00000511040 DEFB130AP0DP74 79 aa9.94□□□□□ -0.82
DDX41-212ENST00000511040 ZNF138P52744 262 aa9.94□□□□□ -0.82
DDX41-212ENST00000511040 DAD1P61803 113 aa9.94□□□□□ -0.82
DDX41-212ENST00000511040 GNG5P63218 68 aa9.94□□□□□ -0.82
DDX41-212ENST00000511040 ZNF726P1Q15940 193 aa9.94□□□□□ -0.82
DDX41-212ENST00000511040 PRR9Q5T870 116 aa9.94□□□□□ -0.82
DDX41-212ENST00000511040 Q6ZQT7 251 aa9.94□□□□□ -0.82
DDX41-212ENST00000511040 IQCF2Q8IXL9 164 aa9.94□□□□□ -0.82
DDX41-212ENST00000511040 KCNRGQ8N5I3 272 aa9.94□□□□□ -0.82
DDX41-212ENST00000511040 ZFAND2AQ8N6M9 145 aa9.94□□□□□ -0.82
DDX41-212ENST00000511040 CMTM2Q8TAZ6 248 aa9.94□□□□□ -0.82
DDX41-212ENST00000511040 C16orf74Q96GX8 76 aa9.94□□□□□ -0.82
DDX41-212ENST00000511040 GPX1P07203 203 aa9.93□□□□□ -0.82
DDX41-212ENST00000511040 CRISP2P16562 243 aa9.93□□□□□ -0.82
DDX41-212ENST00000511040 AKR1C8PQ5T2L2 129 aa9.93□□□□□ -0.82
DDX41-212ENST00000511040 GOLT1AQ6ZVE7 132 aa9.93□□□□□ -0.82
DDX41-212ENST00000511040 CCDC28AQ8IWP9 274 aa9.93□□□□□ -0.82
DDX41-212ENST00000511040 RNASE8Q8TDE3 154 aaKnown RBP9.93□□□□□ -0.82
DDX41-212ENST00000511040 RXFP4Q8TDU9 374 aa9.93□□□□□ -0.82
DDX41-212ENST00000511040 ARPC5LQ9BPX5 153 aa9.93□□□□□ -0.82
DDX41-212ENST00000511040 NOP10Q9NPE3 64 aaKnown RBP9.93□□□□□ -0.82
DDX41-212ENST00000511040 APLNQ9ULZ1 77 aa9.93□□□□□ -0.82
DDX41-212ENST00000511040 CXorf1O96002 111 aa9.92□□□□□ -0.82
DDX41-212ENST00000511040 FAM74A1Q5RGS3 127 aa9.92□□□□□ -0.82
DDX41-212ENST00000511040 TMEM263Q8WUH6 116 aaKnown RBP9.92□□□□□ -0.82
DDX41-212ENST00000511040 RBAKDNA6NC62 111 aa9.91□□□□□ -0.82
DDX41-212ENST00000511040 LYRM9A8MSI8 78 aa9.91□□□□□ -0.82
DDX41-212ENST00000511040 HMSDA8MTL9 139 aa9.91□□□□□ -0.82
DDX41-212ENST00000511040 ZNF324O75467 553 aaPredicted RBP9.91□□□□□ -0.82
DDX41-212ENST00000511040 FGF8P55075 233 aaPredicted RBP9.91□□□□□ -0.82
DDX41-212ENST00000511040 ZNF345Q14585 488 aa9.91□□□□□ -0.82
DDX41-212ENST00000511040 ZNF493Q6ZR52 646 aa9.91□□□□□ -0.82
DDX41-212ENST00000511040 PYGO2Q9BRQ0 406 aa9.91□□□□□ -0.82
DDX41-212ENST00000511040 TMPRSS5Q9H3S3 457 aa9.91□□□□□ -0.82
DDX41-212ENST00000511040 TIMM8BQ9Y5J9 83 aaPredicted RBP9.91□□□□□ -0.82
DDX41-212ENST00000511040 TRAV8-1A0A0A6YYK1 113 aa9.9□□□□□ -0.82
DDX41-212ENST00000511040 A0A0D9SG52 128 aa9.9□□□□□ -0.82
DDX41-212ENST00000511040 CTXND1A0A1B0GTU2 59 aa9.9□□□□□ -0.82
DDX41-212ENST00000511040 KANTRA0A1W2PQU2 76 aa9.9□□□□□ -0.82
DDX41-212ENST00000511040 BCL2L11O43521 198 aa9.9□□□□□ -0.82
DDX41-212ENST00000511040 PFDN1O60925 122 aa9.9□□□□□ -0.82
DDX41-212ENST00000511040 C1QBP02746 253 aa9.9□□□□□ -0.82
DDX41-212ENST00000511040 NMBP08949 121 aa9.9□□□□□ -0.82
DDX41-212ENST00000511040 NKX2-5P52952 324 aaPredicted RBP9.9□□□□□ -0.82
DDX41-212ENST00000511040 SUN5Q8TC36 379 aa9.9□□□□□ -0.82
DDX41-212ENST00000511040 SGK494Q96LW2 274 aa9.9□□□□□ -0.82
DDX41-212ENST00000511040 ZNF471Q9BX82 626 aaPredicted RBP9.9□□□□□ -0.82
DDX41-212ENST00000511040 TMEM167BQ9NRX6 74 aa9.9□□□□□ -0.82
DDX41-212ENST00000511040 CBY3A6NI87 242 aa9.89□□□□□ -0.83
DDX41-212ENST00000511040 GGTLC3B5MD39 225 aa9.89□□□□□ -0.83
DDX41-212ENST00000511040 RGS13O14921 159 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms