RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 RPUSD4Q96CM3 377 aaKnown RBP10.72□□□□□ -0.69
HMGCL-208ENST00000509389 SLC50A1Q9BRV3 221 aa10.72□□□□□ -0.69
HMGCL-208ENST00000509389 RHPN1-AS1Q9BWJ2 59 aa10.72□□□□□ -0.69
HMGCL-208ENST00000509389 TRBV20OR9-2A0A075B6H5 130 aa10.71□□□□□ -0.69
HMGCL-208ENST00000509389 IGHV3-49A0A0A0MS15 119 aa10.71□□□□□ -0.69
HMGCL-208ENST00000509389 C9JCJ5 164 aa10.71□□□□□ -0.69
HMGCL-208ENST00000509389 ATF4P18848 351 aaPredicted RBP10.71□□□□□ -0.69
HMGCL-208ENST00000509389 RANP62826 216 aaKnown RBP10.71□□□□□ -0.69
HMGCL-208ENST00000509389 PSG9Q00887 426 aa10.71□□□□□ -0.69
HMGCL-208ENST00000509389 ZNF124Q15973 351 aa10.71□□□□□ -0.69
HMGCL-208ENST00000509389 MRPL53Q96EL3 112 aaKnown RBP10.71□□□□□ -0.69
HMGCL-208ENST00000509389 EPDR1Q9UM22 224 aa10.71□□□□□ -0.69
HMGCL-208ENST00000509389 KLF12Q9Y4X4 402 aa10.71□□□□□ -0.69
HMGCL-208ENST00000509389 IGHV3OR16-13A0A075B7E8 117 aa10.7□□□□□ -0.7
HMGCL-208ENST00000509389 IGHV3-74A0A0B4J1X5 117 aa10.7□□□□□ -0.7
HMGCL-208ENST00000509389 IGHV3-66A0A0C4DH42 116 aa10.7□□□□□ -0.7
HMGCL-208ENST00000509389 HELTA6NFD8 242 aa10.7□□□□□ -0.7
HMGCL-208ENST00000509389 H3BTX0 84 aa10.7□□□□□ -0.7
HMGCL-208ENST00000509389 PEX7O00628 323 aa10.7□□□□□ -0.7
HMGCL-208ENST00000509389 TCRAP04437 139 aa10.7□□□□□ -0.7
HMGCL-208ENST00000509389 TFPI2P48307 235 aa10.7□□□□□ -0.7
HMGCL-208ENST00000509389 SVBPQ8N300 66 aa10.7□□□□□ -0.7
HMGCL-208ENST00000509389 ATG101Q9BSB4 218 aa10.7□□□□□ -0.7
HMGCL-208ENST00000509389 DERL1Q9BUN8 251 aa10.7□□□□□ -0.7
HMGCL-208ENST00000509389 CLEC5AQ9NY25 188 aa10.7□□□□□ -0.7
HMGCL-208ENST00000509389 IGKV3-7A0A075B6H7 116 aa10.69□□□□□ -0.7
HMGCL-208ENST00000509389 TRAV8-2A0A0B4J237 113 aa10.69□□□□□ -0.7
HMGCL-208ENST00000509389 TRBV6-1A0A0K0K1D8 114 aa10.69□□□□□ -0.7
HMGCL-208ENST00000509389 PGPA6NDG6 321 aa10.69□□□□□ -0.7
HMGCL-208ENST00000509389 APOC3P02656 99 aa10.69□□□□□ -0.7
HMGCL-208ENST00000509389 SNRPCP09234 159 aaKnown RBP10.69□□□□□ -0.7
HMGCL-208ENST00000509389 CMC4P56277 68 aaPredicted RBP10.69□□□□□ -0.7
HMGCL-208ENST00000509389 PNRC1Q12796 327 aaPredicted RBP10.69□□□□□ -0.7
HMGCL-208ENST00000509389 EXOC3-AS1Q8N2X6 119 aa10.69□□□□□ -0.7
HMGCL-208ENST00000509389 IGF2BP2-AS1Q96M15 143 aa10.69□□□□□ -0.7
HMGCL-208ENST00000509389 SMIM7Q9BQ49 75 aa10.69□□□□□ -0.7
HMGCL-208ENST00000509389 SDF2L1Q9HCN8 221 aa10.69□□□□□ -0.7
HMGCL-208ENST00000509389 NRN1Q9NPD7 142 aa10.69□□□□□ -0.7
HMGCL-208ENST00000509389 KLK5Q9Y337 293 aaPredicted RBP10.69□□□□□ -0.7
HMGCL-208ENST00000509389 LY96Q9Y6Y9 160 aa10.69□□□□□ -0.7
HMGCL-208ENST00000509389 ZNF727A8MUV8 499 aa10.68□□□□□ -0.7
HMGCL-208ENST00000509389 SAMD13Q5VXD3 122 aa10.68□□□□□ -0.7
HMGCL-208ENST00000509389 GBGT1Q8N5D6 347 aa10.68□□□□□ -0.7
HMGCL-208ENST00000509389 DCANP1Q8TF63 244 aa10.68□□□□□ -0.7
HMGCL-208ENST00000509389 NIPSNAP3BQ9BS92 247 aa10.68□□□□□ -0.7
HMGCL-208ENST00000509389 CSTL1Q9H114 145 aa10.68□□□□□ -0.7
HMGCL-208ENST00000509389 NAT8Q9UHE5 227 aa10.68□□□□□ -0.7
HMGCL-208ENST00000509389 PRELID1Q9Y255 219 aa10.68□□□□□ -0.7
HMGCL-208ENST00000509389 SERTM2A0A1B0GWG4 89 aa10.67□□□□□ -0.7
HMGCL-208ENST00000509389 SLC25A5P05141 298 aaKnown RBP10.67□□□□□ -0.7
HMGCL-208ENST00000509389 RPL35P42766 123 aaKnown RBP10.67□□□□□ -0.7
HMGCL-208ENST00000509389 TAS2R60P59551 318 aa10.67□□□□□ -0.7
HMGCL-208ENST00000509389 GNG5P63218 68 aa10.67□□□□□ -0.7
HMGCL-208ENST00000509389 TMEM183BQ1AE95 376 aa10.67□□□□□ -0.7
HMGCL-208ENST00000509389 SMIM12Q96EX1 92 aa10.67□□□□□ -0.7
HMGCL-208ENST00000509389 AAMDCQ9H7C9 122 aa10.67□□□□□ -0.7
HMGCL-208ENST00000509389 TRAV2A0A0B4J234 112 aa10.66□□□□□ -0.7
HMGCL-208ENST00000509389 DIRC3C9JPN6 131 aa10.66□□□□□ -0.7
HMGCL-208ENST00000509389 M0R3E3 92 aa10.66□□□□□ -0.7
HMGCL-208ENST00000509389 SNAPINO95295 136 aa10.66□□□□□ -0.7
HMGCL-208ENST00000509389 IGLV2-11P01706 119 aa10.66□□□□□ -0.7
HMGCL-208ENST00000509389 TCF24Q7RTU0 167 aa10.66□□□□□ -0.7
HMGCL-208ENST00000509389 TMEM75Q8N9X5 138 aa10.66□□□□□ -0.7
HMGCL-208ENST00000509389 CLRN3Q8NCR9 226 aa10.66□□□□□ -0.7
HMGCL-208ENST00000509389 PHLDA1Q8WV24 401 aaPredicted RBP10.66□□□□□ -0.7
HMGCL-208ENST00000509389 ISLRO14498 428 aa10.65□□□□□ -0.7
HMGCL-208ENST00000509389 IGLV2-8P01709 118 aa10.65□□□□□ -0.7
HMGCL-208ENST00000509389 S100A9P06702 114 aaKnown RBP10.65□□□□□ -0.7
HMGCL-208ENST00000509389 AKR1C3P42330 323 aa10.65□□□□□ -0.7
HMGCL-208ENST00000509389 CNN1P51911 297 aaKnown RBP10.65□□□□□ -0.7
HMGCL-208ENST00000509389 CEBPGP53567 150 aa10.65□□□□□ -0.7
HMGCL-208ENST00000509389 ATRAIDQ6UW56 229 aa10.65□□□□□ -0.7
HMGCL-208ENST00000509389 LINC01551Q86U37 167 aa10.65□□□□□ -0.7
HMGCL-208ENST00000509389 TVP23CQ96ET8 276 aa10.65□□□□□ -0.7
HMGCL-208ENST00000509389 FMC1Q96HJ9 113 aa10.65□□□□□ -0.7
HMGCL-208ENST00000509389 KMT2AQ03164 3969 aa10.65□□□□□ -0.7
HMGCL-208ENST00000509389 FRAS1Q86XX4 4008 aa10.65□□□□□ -0.7
HMGCL-208ENST00000509389 RBAKDNA6NC62 111 aa10.65□□□□□ -0.71
HMGCL-208ENST00000509389 FBLL1A6NHQ2 334 aaKnown RBP10.65□□□□□ -0.71
HMGCL-208ENST00000509389 HLA-DMBP28068 263 aa10.65□□□□□ -0.71
HMGCL-208ENST00000509389 RPL23P62829 140 aaKnown RBP10.65□□□□□ -0.71
HMGCL-208ENST00000509389 PAFAH1B2P68402 229 aa10.65□□□□□ -0.71
HMGCL-208ENST00000509389 RHEBQ15382 184 aa10.65□□□□□ -0.71
HMGCL-208ENST00000509389 TMEM241Q24JQ0 296 aa10.65□□□□□ -0.71
HMGCL-208ENST00000509389 CENPWQ5EE01 88 aa10.65□□□□□ -0.71
HMGCL-208ENST00000509389 Q86TA4 180 aa10.65□□□□□ -0.71
HMGCL-208ENST00000509389 MLST8Q9BVC4 326 aa10.65□□□□□ -0.71
HMGCL-208ENST00000509389 B4DEV8 164 aa10.64□□□□□ -0.71
HMGCL-208ENST00000509389 K7EQG2 157 aa10.64□□□□□ -0.71
HMGCL-208ENST00000509389 LTAP01374 205 aa10.64□□□□□ -0.71
HMGCL-208ENST00000509389 ZNF674Q2M3X9 581 aa10.64□□□□□ -0.71
HMGCL-208ENST00000509389 COX8CQ7Z4L0 72 aa10.64□□□□□ -0.71
HMGCL-208ENST00000509389 OR11H2Q8NH07 326 aa10.64□□□□□ -0.71
HMGCL-208ENST00000509389 CMTM2Q8TAZ6 248 aa10.64□□□□□ -0.71
HMGCL-208ENST00000509389 LINC00479Q96M42 142 aa10.64□□□□□ -0.71
HMGCL-208ENST00000509389 MS4A6AQ9H2W1 248 aa10.64□□□□□ -0.71
HMGCL-208ENST00000509389 A0A087WWC5 75 aa10.63□□□□□ -0.71
HMGCL-208ENST00000509389 DNASE2O00115 360 aaPredicted RBP10.63□□□□□ -0.71
HMGCL-208ENST00000509389 DEFB131AP59861 70 aa10.63□□□□□ -0.71
HMGCL-208ENST00000509389 NANOS2P60321 138 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms