RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 H3BQ15 152 aa10.85□□□□□ -0.67
CXCL1-202ENST00000509101 J3QL48 77 aa10.85□□□□□ -0.67
CXCL1-202ENST00000509101 AGPAT2O15120 278 aa10.85□□□□□ -0.67
CXCL1-202ENST00000509101 ZNF324O75467 553 aaPredicted RBP10.85□□□□□ -0.67
CXCL1-202ENST00000509101 IGLC2P0DOY2 106 aa10.85□□□□□ -0.67
CXCL1-202ENST00000509101 TMEM14EPQ6UXP3 125 aa10.85□□□□□ -0.67
CXCL1-202ENST00000509101 ENKURQ8TC29 256 aa10.85□□□□□ -0.67
CXCL1-202ENST00000509101 LINC00467Q9BRT7 94 aa10.85□□□□□ -0.67
CXCL1-202ENST00000509101 RCL1Q9Y2P8 373 aaKnown RBP10.85□□□□□ -0.67
CXCL1-202ENST00000509101 KLF12Q9Y4X4 402 aa10.85□□□□□ -0.67
CXCL1-202ENST00000509101 LY96Q9Y6Y9 160 aa10.85□□□□□ -0.67
CXCL1-202ENST00000509101 FAM25EA8MYX2 175 aa10.84□□□□□ -0.67
CXCL1-202ENST00000509101 SPINK4O60575 86 aa10.84□□□□□ -0.67
CXCL1-202ENST00000509101 MBPP02686 304 aaPredicted RBP10.84□□□□□ -0.67
CXCL1-202ENST00000509101 BTN1A1Q13410 526 aa10.84□□□□□ -0.67
CXCL1-202ENST00000509101 LYPD5Q6UWN5 251 aa10.84□□□□□ -0.67
CXCL1-202ENST00000509101 EIF4E3Q8N5X7 224 aaKnown RBP10.84□□□□□ -0.67
CXCL1-202ENST00000509101 OR10P1Q8NGE3 313 aa10.84□□□□□ -0.67
CXCL1-202ENST00000509101 TMEM37Q8WXS4 190 aa10.84□□□□□ -0.67
CXCL1-202ENST00000509101 SAT2Q96F10 170 aaPredicted RBP10.84□□□□□ -0.67
CXCL1-202ENST00000509101 ST6GAL2Q96JF0 529 aa10.84□□□□□ -0.67
CXCL1-202ENST00000509101 SMIM8Q96KF7 97 aa10.84□□□□□ -0.67
CXCL1-202ENST00000509101 MSRB1Q9NZV6 116 aa10.84□□□□□ -0.67
CXCL1-202ENST00000509101 TRAV9-2A0A087WT02 112 aa10.83□□□□□ -0.68
CXCL1-202ENST00000509101 SLC25A5P05141 298 aaKnown RBP10.83□□□□□ -0.68
CXCL1-202ENST00000509101 TCL1AP56279 114 aa10.83□□□□□ -0.68
CXCL1-202ENST00000509101 ERCC8Q13216 396 aa10.83□□□□□ -0.68
CXCL1-202ENST00000509101 C10orf113Q5VZT2 155 aa10.83□□□□□ -0.68
CXCL1-202ENST00000509101 MRPL16Q9NX20 251 aaKnown RBP10.83□□□□□ -0.68
CXCL1-202ENST00000509101 PRO0255Q9UI72 69 aa10.83□□□□□ -0.68
CXCL1-202ENST00000509101 DNAH8Q96JB1 4490 aa10.82□□□□□ -0.68
CXCL1-202ENST00000509101 C5orf51A6NDU8 294 aa10.82□□□□□ -0.68
CXCL1-202ENST00000509101 CD300CQ08708 224 aa10.82□□□□□ -0.68
CXCL1-202ENST00000509101 ANXA2RQ3ZCQ2 193 aa10.82□□□□□ -0.68
CXCL1-202ENST00000509101 WFDC10BQ8IUB3 73 aa10.82□□□□□ -0.68
CXCL1-202ENST00000509101 C2orf50Q96LR7 162 aa10.82□□□□□ -0.68
CXCL1-202ENST00000509101 C8orf49Q96NF6 230 aa10.82□□□□□ -0.68
CXCL1-202ENST00000509101 MGST2Q99735 147 aa10.82□□□□□ -0.68
CXCL1-202ENST00000509101 TRAV5A0A0B4J249 113 aa10.81□□□□□ -0.68
CXCL1-202ENST00000509101 C7orf66A4D0T2 115 aa10.81□□□□□ -0.68
CXCL1-202ENST00000509101 KLLNB2CW77 178 aa10.81□□□□□ -0.68
CXCL1-202ENST00000509101 INMT-MINDY4F8WBC2 141 aa10.81□□□□□ -0.68
CXCL1-202ENST00000509101 M0R3E3 92 aa10.81□□□□□ -0.68
CXCL1-202ENST00000509101 CRYBA4P53673 196 aa10.81□□□□□ -0.68
CXCL1-202ENST00000509101 ARL16Q0P5N6 197 aa10.81□□□□□ -0.68
CXCL1-202ENST00000509101 IL15RAQ13261 267 aa10.81□□□□□ -0.68
CXCL1-202ENST00000509101 MRPL23Q16540 153 aaKnown RBP10.81□□□□□ -0.68
CXCL1-202ENST00000509101 NEGR1Q7Z3B1 354 aa10.81□□□□□ -0.68
CXCL1-202ENST00000509101 C11orf1Q9H5F2 150 aa10.81□□□□□ -0.68
CXCL1-202ENST00000509101 LSM5Q9Y4Y9 91 aaKnown RBP10.81□□□□□ -0.68
CXCL1-202ENST00000509101 IGLV5-52A0A0A0MRZ9 124 aa10.8□□□□□ -0.68
CXCL1-202ENST00000509101 PRAF2O60831 178 aa10.8□□□□□ -0.68
CXCL1-202ENST00000509101 SIX6O95475 246 aa10.8□□□□□ -0.68
CXCL1-202ENST00000509101 RNASE4P34096 147 aaKnown RBP10.8□□□□□ -0.68
CXCL1-202ENST00000509101 GUK1Q16774 197 aa10.8□□□□□ -0.68
CXCL1-202ENST00000509101 VGLL1Q99990 258 aa10.8□□□□□ -0.68
CXCL1-202ENST00000509101 TP53TG3Q9ULZ0 132 aa10.8□□□□□ -0.68
CXCL1-202ENST00000509101 HHLA3Q9XRX5 114 aa10.8□□□□□ -0.68
CXCL1-202ENST00000509101 TSC22D2O75157 780 aa10.79□□□□□ -0.68
CXCL1-202ENST00000509101 MPDU1O75352 247 aa10.79□□□□□ -0.68
CXCL1-202ENST00000509101 EVI2AP22794 236 aa10.79□□□□□ -0.68
CXCL1-202ENST00000509101 TAS2R30P59541 319 aa10.79□□□□□ -0.68
CXCL1-202ENST00000509101 FHL2Q14192 279 aa10.79□□□□□ -0.68
CXCL1-202ENST00000509101 IBA57Q5T440 356 aaKnown RBP10.79□□□□□ -0.68
CXCL1-202ENST00000509101 MARVELD1Q9BSK0 173 aa10.79□□□□□ -0.68
CXCL1-202ENST00000509101 TMEM70Q9BUB7 260 aa10.79□□□□□ -0.68
CXCL1-202ENST00000509101 FAM24AA6NFZ4 105 aa10.78□□□□□ -0.68
CXCL1-202ENST00000509101 E5RGE8 158 aa10.78□□□□□ -0.68
CXCL1-202ENST00000509101 RGS13O14921 159 aa10.78□□□□□ -0.68
CXCL1-202ENST00000509101 SRIP30626 198 aa10.78□□□□□ -0.68
CXCL1-202ENST00000509101 DEFA1P59665 94 aa10.78□□□□□ -0.68
CXCL1-202ENST00000509101 DEFA3P59666 94 aa10.78□□□□□ -0.68
CXCL1-202ENST00000509101 SLAQ13239 276 aa10.78□□□□□ -0.68
CXCL1-202ENST00000509101 RAB32Q13637 225 aa10.78□□□□□ -0.68
CXCL1-202ENST00000509101 MRPL53Q96EL3 112 aaKnown RBP10.78□□□□□ -0.68
CXCL1-202ENST00000509101 FAM19A4Q96LR4 140 aa10.78□□□□□ -0.68
CXCL1-202ENST00000509101 GPN1Q9HCN4 374 aaPredicted RBP10.78□□□□□ -0.68
CXCL1-202ENST00000509101 DNAJC4Q9NNZ3 241 aa10.78□□□□□ -0.68
CXCL1-202ENST00000509101 K7EQD1 137 aa10.77□□□□□ -0.69
CXCL1-202ENST00000509101 L7N2F9 121 aa10.77□□□□□ -0.69
CXCL1-202ENST00000509101 ZNF253O75346 499 aa10.77□□□□□ -0.69
CXCL1-202ENST00000509101 GPX1P07203 203 aa10.77□□□□□ -0.69
CXCL1-202ENST00000509101 CRYGDP07320 174 aa10.77□□□□□ -0.69
CXCL1-202ENST00000509101 CAMLGP49069 296 aa10.77□□□□□ -0.69
CXCL1-202ENST00000509101 VAMP2P63027 116 aa10.77□□□□□ -0.69
CXCL1-202ENST00000509101 PRR9Q5T870 116 aa10.77□□□□□ -0.69
CXCL1-202ENST00000509101 MIC13Q5XKP0 118 aa10.77□□□□□ -0.69
CXCL1-202ENST00000509101 Q6ZQT7 251 aa10.77□□□□□ -0.69
CXCL1-202ENST00000509101 ARPC5LQ9BPX5 153 aa10.77□□□□□ -0.69
CXCL1-202ENST00000509101 GGACTQ9BVM4 153 aa10.77□□□□□ -0.69
CXCL1-202ENST00000509101 AGPAT4-IT1Q9H0P7 198 aa10.77□□□□□ -0.69
CXCL1-202ENST00000509101 TRBV19A0A075B6N1 114 aa10.76□□□□□ -0.69
CXCL1-202ENST00000509101 TRGV4A0A0C4DH28 118 aa10.76□□□□□ -0.69
CXCL1-202ENST00000509101 K7EP13 123 aa10.76□□□□□ -0.69
CXCL1-202ENST00000509101 PSCAO43653 123 aa10.76□□□□□ -0.69
CXCL1-202ENST00000509101 SFTA3P0C7M3 94 aa10.76□□□□□ -0.69
CXCL1-202ENST00000509101 S100A10P60903 97 aa10.76□□□□□ -0.69
CXCL1-202ENST00000509101 Q6ZRG5 221 aa10.76□□□□□ -0.69
CXCL1-202ENST00000509101 OR1L4Q8NGR5 311 aa10.76□□□□□ -0.69
CXCL1-202ENST00000509101 PCNPQ8WW12 178 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms