RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 GAGE4Q13068 117 aa4.07□□□□□ -1.76
HMGB1P44-201ENST00000508597 GCSAMLQ5JQS6 135 aa4.07□□□□□ -1.76
HMGB1P44-201ENST00000508597 FAM74A1Q5RGS3 127 aa4.07□□□□□ -1.76
HMGB1P44-201ENST00000508597 FAM122CQ6P4D5 195 aa4.07□□□□□ -1.76
HMGB1P44-201ENST00000508597 C9orf47Q6ZRZ4 202 aa4.07□□□□□ -1.76
HMGB1P44-201ENST00000508597 MIR17HGQ75NE6 70 aa4.07□□□□□ -1.76
HMGB1P44-201ENST00000508597 RPP25LQ8N5L8 163 aaKnown RBP4.07□□□□□ -1.76
HMGB1P44-201ENST00000508597 ARL6IP6Q8N6S5 226 aa4.07□□□□□ -1.76
HMGB1P44-201ENST00000508597 SUN5Q8TC36 379 aa4.07□□□□□ -1.76
HMGB1P44-201ENST00000508597 MRPL53Q96EL3 112 aaKnown RBP4.07□□□□□ -1.76
HMGB1P44-201ENST00000508597 FAM167A-AS1Q96KT0 104 aa4.07□□□□□ -1.76
HMGB1P44-201ENST00000508597 PAXXQ9BUH6 204 aa4.07□□□□□ -1.76
HMGB1P44-201ENST00000508597 SLC25A2Q9BXI2 301 aa4.07□□□□□ -1.76
HMGB1P44-201ENST00000508597 NKX6-2Q9C056 277 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P44-201ENST00000508597 SH3BGRL3Q9H299 93 aa4.07□□□□□ -1.76
HMGB1P44-201ENST00000508597 TMEM167BQ9NRX6 74 aa4.07□□□□□ -1.76
HMGB1P44-201ENST00000508597 SMAD5-AS1Q9Y6J3 95 aa4.07□□□□□ -1.76
HMGB1P44-201ENST00000508597 TRBV19A0A075B6N1 114 aa4.06□□□□□ -1.76
HMGB1P44-201ENST00000508597 TRAV1-1A0A0B4J248 108 aa4.06□□□□□ -1.76
HMGB1P44-201ENST00000508597 TRAV5A0A0B4J249 113 aa4.06□□□□□ -1.76
HMGB1P44-201ENST00000508597 SOCS3O14543 225 aa4.06□□□□□ -1.76
HMGB1P44-201ENST00000508597 HBE1P02100 147 aa4.06□□□□□ -1.76
HMGB1P44-201ENST00000508597 CD81P60033 236 aa4.06□□□□□ -1.76
HMGB1P44-201ENST00000508597 SEC61BP60468 96 aaKnown RBP4.06□□□□□ -1.76
HMGB1P44-201ENST00000508597 LEMD1Q68G75 181 aa4.06□□□□□ -1.76
HMGB1P44-201ENST00000508597 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.06□□□□□ -1.76
HMGB1P44-201ENST00000508597 GBGT1Q8N5D6 347 aa4.06□□□□□ -1.76
HMGB1P44-201ENST00000508597 MBD3L1Q8WWY6 194 aa4.06□□□□□ -1.76
HMGB1P44-201ENST00000508597 ZNF331Q9NQX6 463 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P44-201ENST00000508597 ARL2-SNX15V9GYD0 113 aa4.06□□□□□ -1.76
HMGB1P44-201ENST00000508597 AGRNO00468 2067 aa4.06□□□□□ -1.76
HMGB1P44-201ENST00000508597 IGKV3-7A0A075B6H7 116 aa4.05□□□□□ -1.76
HMGB1P44-201ENST00000508597 SERTM2A0A1B0GWG4 89 aa4.05□□□□□ -1.76
HMGB1P44-201ENST00000508597 A0A1W2PRE2 83 aa4.05□□□□□ -1.76
HMGB1P44-201ENST00000508597 MAP1LC3B2A6NCE7 125 aa4.05□□□□□ -1.76
HMGB1P44-201ENST00000508597 H3BQ15 152 aa4.05□□□□□ -1.76
HMGB1P44-201ENST00000508597 DUSP14O95147 198 aaKnown RBP4.05□□□□□ -1.76
HMGB1P44-201ENST00000508597 IFNA7P01567 189 aa4.05□□□□□ -1.76
HMGB1P44-201ENST00000508597 CD7P09564 240 aa4.05□□□□□ -1.76
HMGB1P44-201ENST00000508597 ZNF688P0C7X2 276 aa4.05□□□□□ -1.76
HMGB1P44-201ENST00000508597 ARL14EPLP0DKL9 152 aa4.05□□□□□ -1.76
HMGB1P44-201ENST00000508597 IGHV4-30-4P0DP06 118 aa4.05□□□□□ -1.76
HMGB1P44-201ENST00000508597 GCHFRP30047 84 aa4.05□□□□□ -1.76
HMGB1P44-201ENST00000508597 TAGLN2P37802 199 aaKnown RBP4.05□□□□□ -1.76
HMGB1P44-201ENST00000508597 CSN1S1P47710 185 aa4.05□□□□□ -1.76
HMGB1P44-201ENST00000508597 TFPI2P48307 235 aa4.05□□□□□ -1.76
HMGB1P44-201ENST00000508597 NKX2-5P52952 324 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P44-201ENST00000508597 UBE2L3P68036 154 aaKnown RBP4.05□□□□□ -1.76
HMGB1P44-201ENST00000508597 PSG3Q16557 428 aa4.05□□□□□ -1.76
HMGB1P44-201ENST00000508597 EBLN2Q6P2I7 272 aa4.05□□□□□ -1.76
HMGB1P44-201ENST00000508597 FOXI2Q6ZQN5 318 aa4.05□□□□□ -1.76
HMGB1P44-201ENST00000508597 RXFP4Q8TDU9 374 aa4.05□□□□□ -1.76
HMGB1P44-201ENST00000508597 TMED6Q8WW62 240 aa4.05□□□□□ -1.76
HMGB1P44-201ENST00000508597 FXYD5Q96DB9 178 aa4.05□□□□□ -1.76
HMGB1P44-201ENST00000508597 C17orf77Q96MU5 243 aa4.05□□□□□ -1.76
HMGB1P44-201ENST00000508597 TXNDC17Q9BRA2 123 aa4.05□□□□□ -1.76
HMGB1P44-201ENST00000508597 TCEAL7Q9BRU2 100 aa4.05□□□□□ -1.76
HMGB1P44-201ENST00000508597 MAP1LC3BQ9GZQ8 125 aa4.05□□□□□ -1.76
HMGB1P44-201ENST00000508597 TUBA4BQ9H853 241 aa4.05□□□□□ -1.76
HMGB1P44-201ENST00000508597 ZNF586Q9NXT0 402 aa4.05□□□□□ -1.76
HMGB1P44-201ENST00000508597 RFNGQ9Y644 331 aa4.05□□□□□ -1.76
HMGB1P44-201ENST00000508597 TRAV8-2A0A0B4J237 113 aa4.04□□□□□ -1.76
HMGB1P44-201ENST00000508597 KIR2DL5BA0A0G2JN68 375 aa4.04□□□□□ -1.76
HMGB1P44-201ENST00000508597 KIR2DL5BA0A0G2JPC4 375 aa4.04□□□□□ -1.76
HMGB1P44-201ENST00000508597 RBAKDNA6NC62 111 aa4.04□□□□□ -1.76
HMGB1P44-201ENST00000508597 FBLL1A6NHQ2 334 aaKnown RBP4.04□□□□□ -1.76
HMGB1P44-201ENST00000508597 UBE2CO00762 179 aa4.04□□□□□ -1.76
HMGB1P44-201ENST00000508597 SLC25A5P05141 298 aaKnown RBP4.04□□□□□ -1.76
HMGB1P44-201ENST00000508597 OR10J4P0C629 311 aa4.04□□□□□ -1.76
HMGB1P44-201ENST00000508597 PYYP10082 97 aa4.04□□□□□ -1.76
HMGB1P44-201ENST00000508597 HLA-DRB4P13762 266 aa4.04□□□□□ -1.76
HMGB1P44-201ENST00000508597 FHITP49789 147 aa4.04□□□□□ -1.76
HMGB1P44-201ENST00000508597 DEFB131AP59861 70 aa4.04□□□□□ -1.76
HMGB1P44-201ENST00000508597 NUTF2P61970 127 aaKnown RBP4.04□□□□□ -1.76
HMGB1P44-201ENST00000508597 ZNF726P1Q15940 193 aa4.04□□□□□ -1.76
HMGB1P44-201ENST00000508597 PSMG4Q5JS54 123 aa4.04□□□□□ -1.76
HMGB1P44-201ENST00000508597 MORN3Q6PF18 240 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P44-201ENST00000508597 TEX261Q6UWH6 196 aa4.04□□□□□ -1.76
HMGB1P44-201ENST00000508597 STHQ8IWL8 128 aa4.04□□□□□ -1.76
HMGB1P44-201ENST00000508597 KIR2DL5AQ8N109 375 aa4.04□□□□□ -1.76
HMGB1P44-201ENST00000508597 KIR2DL5BQ8NHK3 375 aa4.04□□□□□ -1.76
HMGB1P44-201ENST00000508597 FAM213BQ8TBF2 198 aa4.04□□□□□ -1.76
HMGB1P44-201ENST00000508597 SFT2D1Q8WV19 159 aa4.04□□□□□ -1.76
HMGB1P44-201ENST00000508597 LINC00052Q96N35 136 aa4.04□□□□□ -1.76
HMGB1P44-201ENST00000508597 SAV1Q9H4B6 383 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P44-201ENST00000508597 OTORQ9NRC9 128 aa4.04□□□□□ -1.76
HMGB1P44-201ENST00000508597 HLA-DRB4X5D2U9 266 aa4.04□□□□□ -1.76
HMGB1P44-201ENST00000508597 FBN3Q75N90 2809 aa4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 LOC102724200A0A096LPH7 203 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 IGLV5-52A0A0A0MRZ9 124 aa4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 TRBV7-9A0A0J9YWB2 115 aa4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 A0A0J9YX75 114 aa4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 A8MTW9 85 aa4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 ZNF705EA8MWA4 302 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 F6UZH7 168 aa4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 H3BMM0 161 aa4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 BOLA2-SMG1P6H3BVE0 249 aa4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 K7EIL1 84 aa4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 K7EQM0 130 aa4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 ATP6V1G1O75348 118 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms