RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 PRSS33Q8NF86 280 aa3.87□□□□□ -1.79
HMGB3P16-201ENST00000508037 OR11H6Q8NGC7 330 aa3.87□□□□□ -1.79
HMGB3P16-201ENST00000508037 ZNF502Q8TBZ5 544 aa3.87□□□□□ -1.79
HMGB3P16-201ENST00000508037 MRAP2Q96G30 205 aa3.87□□□□□ -1.79
HMGB3P16-201ENST00000508037 TIMD4Q96H15 378 aa3.87□□□□□ -1.79
HMGB3P16-201ENST00000508037 ZNF479Q96JC4 524 aa3.87□□□□□ -1.79
HMGB3P16-201ENST00000508037 C17orf77Q96MU5 243 aa3.87□□□□□ -1.79
HMGB3P16-201ENST00000508037 FOXC2Q99958 501 aa3.87□□□□□ -1.79
HMGB3P16-201ENST00000508037 DKK2Q9UBU2 259 aa3.87□□□□□ -1.79
HMGB3P16-201ENST00000508037 Q9UFV3 132 aa3.87□□□□□ -1.79
HMGB3P16-201ENST00000508037 INTS1Q8N201 2190 aaKnown RBP3.87□□□□□ -1.79
HMGB3P16-201ENST00000508037 KNTC1P50748 2209 aa3.86□□□□□ -1.79
HMGB3P16-201ENST00000508037 TRBV25-1A0A075B6N4 114 aa3.86□□□□□ -1.79
HMGB3P16-201ENST00000508037 IGKV2-40A0A087WW87 121 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P16-201ENST00000508037 A0A087WX48 190 aa3.86□□□□□ -1.79
HMGB3P16-201ENST00000508037 A0A1W2PRD5 423 aa3.86□□□□□ -1.79
HMGB3P16-201ENST00000508037 A0A1W2PRF3 423 aa3.86□□□□□ -1.79
HMGB3P16-201ENST00000508037 A0A1W2PRM7 423 aa3.86□□□□□ -1.79
HMGB3P16-201ENST00000508037 TMEM8BA6NDV4 472 aa3.86□□□□□ -1.79
HMGB3P16-201ENST00000508037 OR11H12B2RN74 326 aa3.86□□□□□ -1.79
HMGB3P16-201ENST00000508037 IGLL5B9A064 214 aa3.86□□□□□ -1.79
HMGB3P16-201ENST00000508037 E7EQL1 145 aa3.86□□□□□ -1.79
HMGB3P16-201ENST00000508037 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P16-201ENST00000508037 H7C1H1 209 aa3.86□□□□□ -1.79
HMGB3P16-201ENST00000508037 GOSR1O95249 250 aa3.86□□□□□ -1.79
HMGB3P16-201ENST00000508037 IGKV2D-40P01614 121 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P16-201ENST00000508037 FXYD2P54710 66 aa3.86□□□□□ -1.79
HMGB3P16-201ENST00000508037 HES1Q14469 280 aa3.86□□□□□ -1.79
HMGB3P16-201ENST00000508037 GAGE13Q4V321 117 aa3.86□□□□□ -1.79
HMGB3P16-201ENST00000508037 ORMDL2Q53FV1 153 aa3.86□□□□□ -1.79
HMGB3P16-201ENST00000508037 ZC2HC1BQ5TFG8 222 aa3.86□□□□□ -1.79
HMGB3P16-201ENST00000508037 PRSS57Q6UWY2 283 aa3.86□□□□□ -1.79
HMGB3P16-201ENST00000508037 IL17RELQ6ZVW7 336 aa3.86□□□□□ -1.79
HMGB3P16-201ENST00000508037 LY6G5BQ8NDX9 201 aa3.86□□□□□ -1.79
HMGB3P16-201ENST00000508037 DEFB124Q8NES8 71 aa3.86□□□□□ -1.79
HMGB3P16-201ENST00000508037 OR11H1Q8NG94 326 aa3.86□□□□□ -1.79
HMGB3P16-201ENST00000508037 OR11H2Q8NH07 326 aa3.86□□□□□ -1.79
HMGB3P16-201ENST00000508037 ATP6V0E2Q8NHE4 81 aa3.86□□□□□ -1.79
HMGB3P16-201ENST00000508037 TMEM158Q8WZ71 300 aa3.86□□□□□ -1.79
HMGB3P16-201ENST00000508037 RNF185Q96GF1 192 aa3.86□□□□□ -1.79
HMGB3P16-201ENST00000508037 C18orf15Q96N68 181 aa3.86□□□□□ -1.79
HMGB3P16-201ENST00000508037 HIST1H4GQ99525 98 aa3.86□□□□□ -1.79
HMGB3P16-201ENST00000508037 NHP2Q9NX24 153 aaKnown RBP3.86□□□□□ -1.79
HMGB3P16-201ENST00000508037 ONECUT1Q9UBC0 465 aa3.86□□□□□ -1.79
HMGB3P16-201ENST00000508037 HHLA3Q9XRX5 114 aa3.86□□□□□ -1.79
HMGB3P16-201ENST00000508037 IGHV4-4A0A075B6R2 117 aa3.85□□□□□ -1.79
HMGB3P16-201ENST00000508037 TEX48A0A1B0GUV7 120 aa3.85□□□□□ -1.79
HMGB3P16-201ENST00000508037 A0A1B0GWB2 263 aa3.85□□□□□ -1.79
HMGB3P16-201ENST00000508037 GAGE12HA6NDE8 117 aa3.85□□□□□ -1.79
HMGB3P16-201ENST00000508037 F8VRH5 84 aa3.85□□□□□ -1.79
HMGB3P16-201ENST00000508037 SMKR1H3BMG3 65 aa3.85□□□□□ -1.79
HMGB3P16-201ENST00000508037 KLK10O43240 276 aa3.85□□□□□ -1.79
HMGB3P16-201ENST00000508037 CLEC3BP05452 202 aa3.85□□□□□ -1.79
HMGB3P16-201ENST00000508037 TMEM11P17152 192 aa3.85□□□□□ -1.79
HMGB3P16-201ENST00000508037 SCGB2A2Q13296 93 aa3.85□□□□□ -1.79
HMGB3P16-201ENST00000508037 RRN3P1Q2M238 152 aa3.85□□□□□ -1.79
HMGB3P16-201ENST00000508037 C12orf74Q32Q52 190 aa3.85□□□□□ -1.79
HMGB3P16-201ENST00000508037 PAPPA-AS1Q5QFB9 102 aa3.85□□□□□ -1.79
HMGB3P16-201ENST00000508037 TMEM78Q5T7P6 136 aa3.85□□□□□ -1.79
HMGB3P16-201ENST00000508037 MINOS1Q5TGZ0 78 aa3.85□□□□□ -1.79
HMGB3P16-201ENST00000508037 C1orf122Q6ZSJ8 110 aa3.85□□□□□ -1.79
HMGB3P16-201ENST00000508037 DTX2Q86UW9 622 aa3.85□□□□□ -1.79
HMGB3P16-201ENST00000508037 PHLDA1Q8WV24 401 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P16-201ENST00000508037 CFHR4Q92496 578 aa3.85□□□□□ -1.79
HMGB3P16-201ENST00000508037 ATP6V0BQ99437 205 aa3.85□□□□□ -1.79
HMGB3P16-201ENST00000508037 SPATA25Q9BR10 227 aa3.85□□□□□ -1.79
HMGB3P16-201ENST00000508037 C20orf78Q9BR46 151 aa3.85□□□□□ -1.79
HMGB3P16-201ENST00000508037 SPANXB1Q9NS25 103 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P16-201ENST00000508037 TMEM160Q9NX00 188 aa3.85□□□□□ -1.79
HMGB3P16-201ENST00000508037 LENEPQ9Y5L5 61 aa3.85□□□□□ -1.79
HMGB3P16-201ENST00000508037 MINOS1-NBL1R4GNA1 71 aa3.85□□□□□ -1.79
HMGB3P16-201ENST00000508037 LAMA3Q16787 3333 aa3.85□□□□□ -1.79
HMGB3P16-201ENST00000508037 DNAH14Q0VDD8 3507 aa3.84□□□□□ -1.79
HMGB3P16-201ENST00000508037 IGLV2-18A0A075B6J9 118 aa3.84□□□□□ -1.79
HMGB3P16-201ENST00000508037 MYMXA0A1B0GTQ4 84 aa3.84□□□□□ -1.79
HMGB3P16-201ENST00000508037 SPAARA0A1B0GVQ0 90 aa3.84□□□□□ -1.79
HMGB3P16-201ENST00000508037 ODF3BA8MYP8 253 aa3.84□□□□□ -1.79
HMGB3P16-201ENST00000508037 M0R381 172 aa3.84□□□□□ -1.79
HMGB3P16-201ENST00000508037 HOXA3O43365 443 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P16-201ENST00000508037 CTSGP08311 255 aa3.84□□□□□ -1.79
HMGB3P16-201ENST00000508037 AZU1P20160 251 aa3.84□□□□□ -1.79
HMGB3P16-201ENST00000508037 PRTN3P24158 256 aa3.84□□□□□ -1.79
HMGB3P16-201ENST00000508037 ZNF80P51504 273 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P16-201ENST00000508037 TCTAP57738 103 aa3.84□□□□□ -1.79
HMGB3P16-201ENST00000508037 FXYD7P58549 80 aa3.84□□□□□ -1.79
HMGB3P16-201ENST00000508037 HERVK_113P61574 105 aa3.84□□□□□ -1.79
HMGB3P16-201ENST00000508037 EBI3Q14213 229 aa3.84□□□□□ -1.79
HMGB3P16-201ENST00000508037 KLK9Q2XQG4 91 aa3.84□□□□□ -1.79
HMGB3P16-201ENST00000508037 ZNF672Q499Z4 452 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P16-201ENST00000508037 TM4SF20Q53R12 229 aa3.84□□□□□ -1.79
HMGB3P16-201ENST00000508037 TCTEX1D4Q5JR98 221 aa3.84□□□□□ -1.79
HMGB3P16-201ENST00000508037 SPANXN1Q5VSR9 72 aa3.84□□□□□ -1.79
HMGB3P16-201ENST00000508037 LCNL1Q6ZST4 164 aa3.84□□□□□ -1.79
HMGB3P16-201ENST00000508037 GTSCR1Q86UQ5 136 aa3.84□□□□□ -1.79
HMGB3P16-201ENST00000508037 FAM110DQ8TAY7 271 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P16-201ENST00000508037 METTL26Q96S19 204 aa3.84□□□□□ -1.79
HMGB3P16-201ENST00000508037 NAA38Q9BRA0 125 aaKnown RBP3.84□□□□□ -1.79
HMGB3P16-201ENST00000508037 SMIM2Q9BVW6 85 aa3.84□□□□□ -1.79
HMGB3P16-201ENST00000508037 MRPL35Q9NZE8 188 aaKnown RBP3.84□□□□□ -1.79
HMGB3P16-201ENST00000508037 KLK9Q9UKQ9 250 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms