RNA–Protein interactions for RNA: ENST00000507906.5

USP53-204, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 4

Gene USP53, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-204ENST00000507906 ADAT1Q9BUB4 502 aaKnown RBP1.45□□□□□ -2.18
USP53-204ENST00000507906 OR2J1Q9GZK6 312 aa1.45□□□□□ -2.18
USP53-204ENST00000507906 TAS2R7Q9NYW3 318 aa1.45□□□□□ -2.18
USP53-204ENST00000507906 ATPIF1Q9UII2 106 aa1.45□□□□□ -2.18
USP53-204ENST00000507906 OR52A1Q9UKL2 312 aa1.45□□□□□ -2.18
USP53-204ENST00000507906 ASB4Q9Y574 426 aa1.45□□□□□ -2.18
USP53-204ENST00000507906 DIP2BQ9P265 1576 aa1.45□□□□□ -2.18
USP53-204ENST00000507906 QSER1Q2KHR3 1735 aa1.45□□□□□ -2.18
USP53-204ENST00000507906 MGAMO43451 1857 aa1.45□□□□□ -2.18
USP53-204ENST00000507906 SLIT1O75093 1534 aa1.45□□□□□ -2.18
USP53-204ENST00000507906 COL14A1Q05707 1796 aaKnown RBP1.44□□□□□ -2.18
USP53-204ENST00000507906 A2ML1A8K2U0 1454 aa1.44□□□□□ -2.18
USP53-204ENST00000507906 DOCK10Q96BY6 2186 aa1.44□□□□□ -2.18
USP53-204ENST00000507906 PDCD11Q14690 1871 aaKnown RBP1.44□□□□□ -2.18
USP53-204ENST00000507906 PPP5D1E7EU14 171 aa1.44□□□□□ -2.18
USP53-204ENST00000507906 K7ERJ3 54 aa1.44□□□□□ -2.18
USP53-204ENST00000507906 EDF1O60869 148 aaKnown RBP1.44□□□□□ -2.18
USP53-204ENST00000507906 TRGC2P03986 189 aa1.44□□□□□ -2.18
USP53-204ENST00000507906 PRB1P04280 392 aa1.44□□□□□ -2.18
USP53-204ENST00000507906 TCTAP57738 103 aa1.44□□□□□ -2.18
USP53-204ENST00000507906 GNG2P59768 71 aa1.44□□□□□ -2.18
USP53-204ENST00000507906 MSMO1Q15800 293 aa1.44□□□□□ -2.18
USP53-204ENST00000507906 PATE2Q6UY27 113 aa1.44□□□□□ -2.18
USP53-204ENST00000507906 CROCCP2Q86T23 111 aa1.44□□□□□ -2.18
USP53-204ENST00000507906 ISOC1Q96CN7 298 aa1.44□□□□□ -2.18
USP53-204ENST00000507906 ZHX1-C8orf76Q96EF9 292 aa1.44□□□□□ -2.18
USP53-204ENST00000507906 REG4Q9BYZ8 158 aa1.44□□□□□ -2.18
USP53-204ENST00000507906 PBOV1Q9GZY1 135 aa1.44□□□□□ -2.18
USP53-204ENST00000507906 RNF11Q9Y3C5 154 aa1.44□□□□□ -2.18
USP53-204ENST00000507906 SCN8AQ9UQD0 1980 aa1.44□□□□□ -2.18
USP53-204ENST00000507906 TSC2P49815 1807 aa1.44□□□□□ -2.18
USP53-204ENST00000507906 NINQ8N4C6 2090 aa1.44□□□□□ -2.18
USP53-204ENST00000507906 ABCA3Q99758 1704 aa1.43□□□□□ -2.18
USP53-204ENST00000507906 PARP14Q460N5 1801 aa1.43□□□□□ -2.18
USP53-204ENST00000507906 C10orf71Q711Q0 1435 aa1.43□□□□□ -2.18
USP53-204ENST00000507906 TNRC6CQ9HCJ0 1690 aaKnown RBP1.43□□□□□ -2.18
USP53-204ENST00000507906 HELZP42694 1942 aaKnown RBP1.43□□□□□ -2.18
USP53-204ENST00000507906 TRAV12-1A0A0B4J245 112 aa1.43□□□□□ -2.18
USP53-204ENST00000507906 CCDC160A6NGH7 325 aa1.43□□□□□ -2.18
USP53-204ENST00000507906 ATP6V1G2-DDX39BF2Z307 99 aa1.43□□□□□ -2.18
USP53-204ENST00000507906 AIPO00170 330 aa1.43□□□□□ -2.18
USP53-204ENST00000507906 KPNA4O00629 521 aaPredicted RBP1.43□□□□□ -2.18
USP53-204ENST00000507906 OR1I1O60431 355 aa1.43□□□□□ -2.18
USP53-204ENST00000507906 BAALC-AS2P0C853 105 aa1.43□□□□□ -2.18
USP53-204ENST00000507906 ARPP19P56211 112 aa1.43□□□□□ -2.18
USP53-204ENST00000507906 S100A12P80511 92 aa1.43□□□□□ -2.18
USP53-204ENST00000507906 CDK5R1Q15078 307 aa1.43□□□□□ -2.18
USP53-204ENST00000507906 Q5BKY6 102 aa1.43□□□□□ -2.18
USP53-204ENST00000507906 TMEM78Q5T7P6 136 aa1.43□□□□□ -2.18
USP53-204ENST00000507906 LINC00471Q8N535 108 aa1.43□□□□□ -2.18
USP53-204ENST00000507906 CANT1Q8WVQ1 401 aa1.43□□□□□ -2.18
USP53-204ENST00000507906 PLEKHB2Q96CS7 222 aa1.43□□□□□ -2.18
USP53-204ENST00000507906 SLC25A21Q9BQT8 299 aaPredicted RBP1.43□□□□□ -2.18
USP53-204ENST00000507906 HS3ST2Q9Y278 367 aa1.43□□□□□ -2.18
USP53-204ENST00000507906 V9GYQ6 96 aa1.43□□□□□ -2.18
USP53-204ENST00000507906 PAPPAQ13219 1627 aa1.43□□□□□ -2.18
USP53-204ENST00000507906 NRXN3Q9Y4C0 1643 aa1.43□□□□□ -2.18
USP53-204ENST00000507906 MCM3APO60318 1980 aa1.43□□□□□ -2.18
USP53-204ENST00000507906 A0A0G2JMZ2 1700 aa1.43□□□□□ -2.18
USP53-204ENST00000507906 LRRC37A2A6NM11 1700 aa1.43□□□□□ -2.18
USP53-204ENST00000507906 LRRC37AA6NMS7 1700 aa1.43□□□□□ -2.18
USP53-204ENST00000507906 NRXN2Q9P2S2 1712 aa1.43□□□□□ -2.18
USP53-204ENST00000507906 PXDNQ92626 1479 aa1.43□□□□□ -2.18
USP53-204ENST00000507906 NHSQ6T4R5 1651 aa1.42□□□□□ -2.18
USP53-204ENST00000507906 ANK1P16157 1881 aa1.42□□□□□ -2.18
USP53-204ENST00000507906 NUP210LQ5VU65 1888 aa1.42□□□□□ -2.18
USP53-204ENST00000507906 SORL1Q92673 2214 aa1.42□□□□□ -2.18
USP53-204ENST00000507906 BRWD1Q9NSI6 2320 aa1.42□□□□□ -2.18
USP53-204ENST00000507906 TRGV10A0A0A0MS01 117 aa1.42□□□□□ -2.18
USP53-204ENST00000507906 TRAV14DV4A0A0A6YYC5 116 aa1.42□□□□□ -2.18
USP53-204ENST00000507906 H0YJX3 145 aa1.42□□□□□ -2.18
USP53-204ENST00000507906 HMGN1P05114 100 aa1.42□□□□□ -2.18
USP53-204ENST00000507906 ROMO1P60602 79 aa1.42□□□□□ -2.18
USP53-204ENST00000507906 ALX1Q15699 326 aa1.42□□□□□ -2.18
USP53-204ENST00000507906 SCGB2B2Q4G0G5 96 aa1.42□□□□□ -2.18
USP53-204ENST00000507906 FKBP1CQ5VVH2 108 aa1.42□□□□□ -2.18
USP53-204ENST00000507906 AKAP14Q86UN6 197 aa1.42□□□□□ -2.18
USP53-204ENST00000507906 FAM24BQ8N5W8 94 aa1.42□□□□□ -2.18
USP53-204ENST00000507906 OR5H6Q8NGV6 325 aa1.42□□□□□ -2.18
USP53-204ENST00000507906 OR10K1Q8NGX5 313 aa1.42□□□□□ -2.18
USP53-204ENST00000507906 RMND5BQ96G75 393 aaPredicted RBP1.42□□□□□ -2.18
USP53-204ENST00000507906 GPER1Q99527 375 aa1.42□□□□□ -2.18
USP53-204ENST00000507906 NPCDR1Q9BY65 106 aa1.42□□□□□ -2.18
USP53-204ENST00000507906 MRPL40Q9NQ50 206 aaKnown RBP1.42□□□□□ -2.18
USP53-204ENST00000507906 RICTORQ6R327 1708 aa1.42□□□□□ -2.18
USP53-204ENST00000507906 SIP14410 1827 aa1.42□□□□□ -2.18
USP53-204ENST00000507906 NUP98P52948 1817 aa1.42□□□□□ -2.18
USP53-204ENST00000507906 ANKRD36A6QL64 1941 aa1.42□□□□□ -2.18
USP53-204ENST00000507906 DUOX1Q9NRD9 1551 aa1.42□□□□□ -2.18
USP53-204ENST00000507906 TECPR2O15040 1411 aa1.41□□□□□ -2.18
USP53-204ENST00000507906 EDC4Q6P2E9 1401 aaKnown RBP1.41□□□□□ -2.18
USP53-204ENST00000507906 PATJQ8NI35 1801 aa1.41□□□□□ -2.18
USP53-204ENST00000507906 MAP1LC3B2A6NCE7 125 aa1.41□□□□□ -2.18
USP53-204ENST00000507906 LINC00587B1AMM8 73 aa1.41□□□□□ -2.18
USP53-204ENST00000507906 H7BYZ3 331 aa1.41□□□□□ -2.18
USP53-204ENST00000507906 GGCTO75223 188 aaKnown RBP1.41□□□□□ -2.18
USP53-204ENST00000507906 IFNA14P01570 189 aa1.41□□□□□ -2.18
USP53-204ENST00000507906 OGNP20774 298 aaKnown RBP1.41□□□□□ -2.18
USP53-204ENST00000507906 TMBIM6P55061 237 aa1.41□□□□□ -2.18
USP53-204ENST00000507906 SURF2Q15527 256 aaPredicted RBP1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms