RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 OXLD1Q5BKU9 147 aa13□□□□□ -0.33
RNF4-209ENST00000507784 Q86TA4 180 aa13□□□□□ -0.33
RNF4-209ENST00000507784 NHLRC2Q8NBF2 726 aa13□□□□□ -0.33
RNF4-209ENST00000507784 OR4B1Q8NGF8 309 aa13□□□□□ -0.33
RNF4-209ENST00000507784 Q8TAT8 98 aa13□□□□□ -0.33
RNF4-209ENST00000507784 SAV1Q9H4B6 383 aaPredicted RBP13□□□□□ -0.33
RNF4-209ENST00000507784 AURKAIP1Q9NWT8 199 aaPredicted RBP13□□□□□ -0.33
RNF4-209ENST00000507784 PPP1R14DQ9NXH3 145 aa13□□□□□ -0.33
RNF4-209ENST00000507784 A0A0J9YX75 114 aa12.99□□□□□ -0.33
RNF4-209ENST00000507784 FBLL1A6NHQ2 334 aaKnown RBP12.99□□□□□ -0.33
RNF4-209ENST00000507784 DUSP14O95147 198 aaKnown RBP12.99□□□□□ -0.33
RNF4-209ENST00000507784 IGKV3-20P01619 116 aa12.99□□□□□ -0.33
RNF4-209ENST00000507784 IGLV2-11P01706 119 aa12.99□□□□□ -0.33
RNF4-209ENST00000507784 MGST1P10620 155 aaKnown RBP12.99□□□□□ -0.33
RNF4-209ENST00000507784 ODF3L2Q3SX64 289 aa12.99□□□□□ -0.33
RNF4-209ENST00000507784 ACTL10Q5JWF8 245 aa12.99□□□□□ -0.33
RNF4-209ENST00000507784 GDF5OSQ5U4N7 250 aa12.99□□□□□ -0.33
RNF4-209ENST00000507784 FOXI2Q6ZQN5 318 aa12.99□□□□□ -0.33
RNF4-209ENST00000507784 C9orf47Q6ZRZ4 202 aa12.99□□□□□ -0.33
RNF4-209ENST00000507784 TVP23CQ96ET8 276 aa12.99□□□□□ -0.33
RNF4-209ENST00000507784 IGF2BP2-AS1Q96M15 143 aa12.99□□□□□ -0.33
RNF4-209ENST00000507784 LINC00477Q96M19 166 aa12.99□□□□□ -0.33
RNF4-209ENST00000507784 TRBV6-1A0A0K0K1D8 114 aa12.98□□□□□ -0.33
RNF4-209ENST00000507784 C9JCJ5 164 aa12.98□□□□□ -0.33
RNF4-209ENST00000507784 NPIPB6E9PJ23 425 aa12.98□□□□□ -0.33
RNF4-209ENST00000507784 S100A1P23297 94 aa12.98□□□□□ -0.33
RNF4-209ENST00000507784 ZNF138P52744 262 aa12.98□□□□□ -0.33
RNF4-209ENST00000507784 ADIRFQ15847 76 aa12.98□□□□□ -0.33
RNF4-209ENST00000507784 C10orf91Q5T1B1 145 aa12.98□□□□□ -0.33
RNF4-209ENST00000507784 GTSCR1Q86UQ5 136 aa12.98□□□□□ -0.33
RNF4-209ENST00000507784 OCC1Q8TAD7 63 aa12.98□□□□□ -0.33
RNF4-209ENST00000507784 NDFIP1Q9BT67 221 aa12.98□□□□□ -0.33
RNF4-209ENST00000507784 SDF2L1Q9HCN8 221 aa12.98□□□□□ -0.33
RNF4-209ENST00000507784 CARHSP1Q9Y2V2 147 aaKnown RBP12.98□□□□□ -0.33
RNF4-209ENST00000507784 COL6A5A8TX70 2615 aa12.98□□□□□ -0.33
RNF4-209ENST00000507784 STAB1Q9NY15 2570 aa12.97□□□□□ -0.33
RNF4-209ENST00000507784 TRBV20OR9-2A0A075B6H5 130 aa12.97□□□□□ -0.33
RNF4-209ENST00000507784 M0R036 132 aa12.97□□□□□ -0.33
RNF4-209ENST00000507784 LTAP01374 205 aa12.97□□□□□ -0.33
RNF4-209ENST00000507784 C8orf49Q96NF6 230 aa12.97□□□□□ -0.33
RNF4-209ENST00000507784 ZNF492Q9P255 531 aa12.97□□□□□ -0.33
RNF4-209ENST00000507784 ZFP30Q9Y2G7 519 aa12.97□□□□□ -0.33
RNF4-209ENST00000507784 CT45A10P0DMU9 189 aa12.96□□□□□ -0.33
RNF4-209ENST00000507784 RPL23P62829 140 aaKnown RBP12.96□□□□□ -0.33
RNF4-209ENST00000507784 SAPCD1Q5SSQ6 148 aa12.96□□□□□ -0.33
RNF4-209ENST00000507784 PRR25Q96S07 402 aa12.96□□□□□ -0.33
RNF4-209ENST00000507784 SORL1Q92673 2214 aa12.96□□□□□ -0.34
RNF4-209ENST00000507784 J3KRW8 73 aa12.95□□□□□ -0.34
RNF4-209ENST00000507784 WIPF1O43516 503 aa12.95□□□□□ -0.34
RNF4-209ENST00000507784 STHQ8IWL8 128 aa12.95□□□□□ -0.34
RNF4-209ENST00000507784 TMEM183AQ8IXX5 376 aa12.95□□□□□ -0.34
RNF4-209ENST00000507784 WFDC10AQ9H1F0 79 aa12.95□□□□□ -0.34
RNF4-209ENST00000507784 H3BMM0 161 aa12.94□□□□□ -0.34
RNF4-209ENST00000507784 IGLV2-8P01709 118 aa12.94□□□□□ -0.34
RNF4-209ENST00000507784 HLA-DRB4P13762 266 aa12.94□□□□□ -0.34
RNF4-209ENST00000507784 OR5I1Q13606 314 aa12.94□□□□□ -0.34
RNF4-209ENST00000507784 PRR27Q6MZM9 219 aa12.94□□□□□ -0.34
RNF4-209ENST00000507784 LINC01551Q86U37 167 aa12.94□□□□□ -0.34
RNF4-209ENST00000507784 LY96Q9Y6Y9 160 aa12.94□□□□□ -0.34
RNF4-209ENST00000507784 HLA-DRB4X5D2U9 266 aa12.94□□□□□ -0.34
RNF4-209ENST00000507784 AGRNO00468 2067 aa12.93□□□□□ -0.34
RNF4-209ENST00000507784 PNRC1Q12796 327 aaPredicted RBP12.93□□□□□ -0.34
RNF4-209ENST00000507784 SMUG1Q53HV7 270 aa12.93□□□□□ -0.34
RNF4-209ENST00000507784 SVBPQ8N300 66 aa12.93□□□□□ -0.34
RNF4-209ENST00000507784 DEFB125Q8N687 156 aa12.93□□□□□ -0.34
RNF4-209ENST00000507784 FAM110AQ9BQ89 295 aa12.93□□□□□ -0.34
RNF4-209ENST00000507784 G3V4G9 280 aa12.92□□□□□ -0.34
RNF4-209ENST00000507784 K7EN84 100 aa12.92□□□□□ -0.34
RNF4-209ENST00000507784 SNAPINO95295 136 aa12.92□□□□□ -0.34
RNF4-209ENST00000507784 LEPP41159 167 aa12.92□□□□□ -0.34
RNF4-209ENST00000507784 FXYD7P58549 80 aa12.92□□□□□ -0.34
RNF4-209ENST00000507784 CLRN3Q8NCR9 226 aa12.92□□□□□ -0.34
RNF4-209ENST00000507784 SMIM12Q96EX1 92 aa12.92□□□□□ -0.34
RNF4-209ENST00000507784 ZC2HC1AQ96GY0 325 aa12.92□□□□□ -0.34
RNF4-209ENST00000507784 BIN3Q9NQY0 253 aa12.92□□□□□ -0.34
RNF4-209ENST00000507784 C19orf73Q9NVV2 129 aa12.92□□□□□ -0.34
RNF4-209ENST00000507784 ZMAT5Q9UDW3 170 aaKnown RBP12.92□□□□□ -0.34
RNF4-209ENST00000507784 LENEPQ9Y5L5 61 aa12.92□□□□□ -0.34
RNF4-209ENST00000507784 GCGP01275 180 aa12.91□□□□□ -0.34
RNF4-209ENST00000507784 GPX1P07203 203 aa12.91□□□□□ -0.34
RNF4-209ENST00000507784 DAZAP1Q96EP5 407 aaKnown RBP12.91□□□□□ -0.34
RNF4-209ENST00000507784 MLST8Q9BVC4 326 aa12.91□□□□□ -0.34
RNF4-209ENST00000507784 RPL35AP18077 110 aaKnown RBP12.9□□□□□ -0.34
RNF4-209ENST00000507784 TSPOP30536 169 aa12.9□□□□□ -0.34
RNF4-209ENST00000507784 RNASE4P34096 147 aaKnown RBP12.9□□□□□ -0.34
RNF4-209ENST00000507784 KRTAP10-11P60412 298 aa12.9□□□□□ -0.34
RNF4-209ENST00000507784 KRTAP21-3Q3LHN1 58 aa12.9□□□□□ -0.34
RNF4-209ENST00000507784 ISOC2Q96AB3 205 aa12.9□□□□□ -0.34
RNF4-209ENST00000507784 VWFP04275 2813 aa12.9□□□□□ -0.34
RNF4-209ENST00000507784 RBMY1BA6NDE4 496 aaKnown RBP12.89□□□□□ -0.35
RNF4-209ENST00000507784 RBMY1EA6NEQ0 496 aaKnown RBP12.89□□□□□ -0.35
RNF4-209ENST00000507784 M0R2Z0 102 aa12.89□□□□□ -0.35
RNF4-209ENST00000507784 RBMY1DP0C7P1 496 aaKnown RBP12.89□□□□□ -0.35
RNF4-209ENST00000507784 ERVFC1-1P60608 527 aa12.89□□□□□ -0.35
RNF4-209ENST00000507784 SPINK13Q1W4C9 94 aa12.89□□□□□ -0.35
RNF4-209ENST00000507784 FAM19A4Q96LR4 140 aa12.89□□□□□ -0.35
RNF4-209ENST00000507784 ODF3Q96PU9 254 aa12.89□□□□□ -0.35
RNF4-209ENST00000507784 SRD5A3Q9H8P0 318 aa12.89□□□□□ -0.35
RNF4-209ENST00000507784 RPS10P5Q9NQ39 176 aa12.89□□□□□ -0.35
RNF4-209ENST00000507784 C7orf77A4D0Y5 90 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms