RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 GSN-AS1Q9NRJ2 163 aa7.99□□□□□ -1.13
HMGCS1-204ENST00000507293 MRPS16Q9Y3D3 137 aaKnown RBP7.99□□□□□ -1.13
HMGCS1-204ENST00000507293 H3BNG1 76 aa7.98□□□□□ -1.13
HMGCS1-204ENST00000507293 NDUFB4O95168 129 aa7.98□□□□□ -1.13
HMGCS1-204ENST00000507293 SLC25A5P05141 298 aaKnown RBP7.98□□□□□ -1.13
HMGCS1-204ENST00000507293 PYYP10082 97 aa7.98□□□□□ -1.13
HMGCS1-204ENST00000507293 HIST1H1EP10412 219 aaKnown RBP7.98□□□□□ -1.13
HMGCS1-204ENST00000507293 HBG1P69891 147 aa7.98□□□□□ -1.13
HMGCS1-204ENST00000507293 HBG2P69892 147 aa7.98□□□□□ -1.13
HMGCS1-204ENST00000507293 IL15RAQ13261 267 aa7.98□□□□□ -1.13
HMGCS1-204ENST00000507293 BTN1A1Q13410 526 aa7.98□□□□□ -1.13
HMGCS1-204ENST00000507293 SPATA12Q7Z6I5 190 aa7.98□□□□□ -1.13
HMGCS1-204ENST00000507293 C11orf72Q8NBR9 251 aa7.98□□□□□ -1.13
HMGCS1-204ENST00000507293 ZNF680Q8NEM1 530 aa7.98□□□□□ -1.13
HMGCS1-204ENST00000507293 Q9H3A6 140 aa7.98□□□□□ -1.13
HMGCS1-204ENST00000507293 GPN1Q9HCN4 374 aaPredicted RBP7.98□□□□□ -1.13
HMGCS1-204ENST00000507293 TMEM14CQ9P0S9 112 aa7.98□□□□□ -1.13
HMGCS1-204ENST00000507293 TIMM9Q9Y5J7 89 aa7.98□□□□□ -1.13
HMGCS1-204ENST00000507293 TRGV2A0A075B6R0 118 aa7.97□□□□□ -1.13
HMGCS1-204ENST00000507293 KLLNB2CW77 178 aa7.97□□□□□ -1.13
HMGCS1-204ENST00000507293 IFITM3Q01628 133 aa7.97□□□□□ -1.13
HMGCS1-204ENST00000507293 CD300CQ08708 224 aa7.97□□□□□ -1.13
HMGCS1-204ENST00000507293 GCSAMLQ5JQS6 135 aa7.97□□□□□ -1.13
HMGCS1-204ENST00000507293 EXOC3-AS1Q8N2X6 119 aa7.97□□□□□ -1.13
HMGCS1-204ENST00000507293 MAPKAPK5-AS1Q8N8E1 139 aa7.97□□□□□ -1.13
HMGCS1-204ENST00000507293 CHAC2Q8WUX2 184 aa7.97□□□□□ -1.13
HMGCS1-204ENST00000507293 BLNKQ8WV28 456 aa7.97□□□□□ -1.13
HMGCS1-204ENST00000507293 VSIG2Q96IQ7 327 aa7.97□□□□□ -1.13
HMGCS1-204ENST00000507293 FAM19A4Q96LR4 140 aa7.97□□□□□ -1.13
HMGCS1-204ENST00000507293 NPCDR1Q9BY65 106 aa7.97□□□□□ -1.13
HMGCS1-204ENST00000507293 AGPAT4-IT1Q9H0P7 198 aa7.97□□□□□ -1.13
HMGCS1-204ENST00000507293 PRELID1Q9Y255 219 aa7.97□□□□□ -1.13
HMGCS1-204ENST00000507293 HSPG2P98160 4391 aa7.96□□□□□ -1.13
HMGCS1-204ENST00000507293 IGKV2-40A0A087WW87 121 aaPredicted RBP7.96□□□□□ -1.14
HMGCS1-204ENST00000507293 A0A096LPF7 62 aa7.96□□□□□ -1.14
HMGCS1-204ENST00000507293 TRGV1A0A0A0MS02 117 aa7.96□□□□□ -1.14
HMGCS1-204ENST00000507293 A0A1W2PPQ1 181 aa7.96□□□□□ -1.14
HMGCS1-204ENST00000507293 MPDU1O75352 247 aa7.96□□□□□ -1.14
HMGCS1-204ENST00000507293 ZNF324O75467 553 aaPredicted RBP7.96□□□□□ -1.14
HMGCS1-204ENST00000507293 IGKV2D-40P01614 121 aaPredicted RBP7.96□□□□□ -1.14
HMGCS1-204ENST00000507293 RNASE4P34096 147 aaKnown RBP7.96□□□□□ -1.14
HMGCS1-204ENST00000507293 PDE6HQ13956 83 aa7.96□□□□□ -1.14
HMGCS1-204ENST00000507293 ATP6V1FQ16864 119 aa7.96□□□□□ -1.14
HMGCS1-204ENST00000507293 ANXA2RQ3ZCQ2 193 aa7.96□□□□□ -1.14
HMGCS1-204ENST00000507293 EIF4E3Q8N5X7 224 aaKnown RBP7.96□□□□□ -1.14
HMGCS1-204ENST00000507293 LINC00477Q96M19 166 aa7.96□□□□□ -1.14
HMGCS1-204ENST00000507293 LINC00467Q9BRT7 94 aa7.96□□□□□ -1.14
HMGCS1-204ENST00000507293 SLC25A2Q9BXI2 301 aa7.96□□□□□ -1.14
HMGCS1-204ENST00000507293 AAMDCQ9H7C9 122 aa7.96□□□□□ -1.14
HMGCS1-204ENST00000507293 FUT9Q9Y231 359 aa7.96□□□□□ -1.14
HMGCS1-204ENST00000507293 KLF12Q9Y4X4 402 aa7.96□□□□□ -1.14
HMGCS1-204ENST00000507293 GPX1P07203 203 aa7.95□□□□□ -1.14
HMGCS1-204ENST00000507293 CRISP2P16562 243 aa7.95□□□□□ -1.14
HMGCS1-204ENST00000507293 TCL1AP56279 114 aa7.95□□□□□ -1.14
HMGCS1-204ENST00000507293 ICAM4Q14773 271 aa7.95□□□□□ -1.14
HMGCS1-204ENST00000507293 PRR9Q5T870 116 aa7.95□□□□□ -1.14
HMGCS1-204ENST00000507293 FAM122CQ6P4D5 195 aa7.95□□□□□ -1.14
HMGCS1-204ENST00000507293 C9orf47Q6ZRZ4 202 aa7.95□□□□□ -1.14
HMGCS1-204ENST00000507293 MIR17HGQ75NE6 70 aa7.95□□□□□ -1.14
HMGCS1-204ENST00000507293 THAP6Q8TBB0 222 aa7.95□□□□□ -1.14
HMGCS1-204ENST00000507293 C18orf15Q96N68 181 aa7.95□□□□□ -1.14
HMGCS1-204ENST00000507293 LRP1BQ9NZR2 4599 aa7.94□□□□□ -1.14
HMGCS1-204ENST00000507293 SPINK4O60575 86 aa7.94□□□□□ -1.14
HMGCS1-204ENST00000507293 PRAF2O60831 178 aa7.94□□□□□ -1.14
HMGCS1-204ENST00000507293 IGHV3-53P01767 116 aa7.94□□□□□ -1.14
HMGCS1-204ENST00000507293 BTF3P20290 206 aaKnown RBP7.94□□□□□ -1.14
HMGCS1-204ENST00000507293 KRTAP10-2P60368 255 aa7.94□□□□□ -1.14
HMGCS1-204ENST00000507293 NHLH2Q02577 135 aa7.94□□□□□ -1.14
HMGCS1-204ENST00000507293 TMEM78Q5T7P6 136 aa7.94□□□□□ -1.14
HMGCS1-204ENST00000507293 Q6ZQT7 251 aa7.94□□□□□ -1.14
HMGCS1-204ENST00000507293 ZFAND2AQ8N6M9 145 aa7.94□□□□□ -1.14
HMGCS1-204ENST00000507293 FAM167A-AS1Q96KT0 104 aa7.94□□□□□ -1.14
HMGCS1-204ENST00000507293 VGLL1Q99990 258 aa7.94□□□□□ -1.14
HMGCS1-204ENST00000507293 MRPL16Q9NX20 251 aaKnown RBP7.94□□□□□ -1.14
HMGCS1-204ENST00000507293 TP53TG3Q9ULZ0 132 aa7.94□□□□□ -1.14
HMGCS1-204ENST00000507293 INMT-MINDY4F8WBC2 141 aa7.93□□□□□ -1.14
HMGCS1-204ENST00000507293 RGS13O14921 159 aa7.93□□□□□ -1.14
HMGCS1-204ENST00000507293 LINC00315P59091 139 aa7.93□□□□□ -1.14
HMGCS1-204ENST00000507293 IBA57Q5T440 356 aaKnown RBP7.93□□□□□ -1.14
HMGCS1-204ENST00000507293 OR5C1Q8NGR4 320 aa7.93□□□□□ -1.14
HMGCS1-204ENST00000507293 Q8TAT8 98 aa7.93□□□□□ -1.14
HMGCS1-204ENST00000507293 ARPC5LQ9BPX5 153 aa7.93□□□□□ -1.14
HMGCS1-204ENST00000507293 ZNF492Q9P255 531 aa7.93□□□□□ -1.14
HMGCS1-204ENST00000507293 ICOSQ9Y6W8 199 aa7.93□□□□□ -1.14
HMGCS1-204ENST00000507293 IGHV1OR15-1A0A075B7D0 117 aa7.92□□□□□ -1.14
HMGCS1-204ENST00000507293 SIVA1O15304 175 aa7.92□□□□□ -1.14
HMGCS1-204ENST00000507293 PAX4O43316 350 aa7.92□□□□□ -1.14
HMGCS1-204ENST00000507293 SIX6O95475 246 aa7.92□□□□□ -1.14
HMGCS1-204ENST00000507293 NMBP08949 121 aa7.92□□□□□ -1.14
HMGCS1-204ENST00000507293 OR10J4P0C629 311 aa7.92□□□□□ -1.14
HMGCS1-204ENST00000507293 NBEAP1P0C6P0 100 aa7.92□□□□□ -1.14
HMGCS1-204ENST00000507293 LRRC37A5PQ49AS3 106 aa7.92□□□□□ -1.14
HMGCS1-204ENST00000507293 FXYD5Q96DB9 178 aa7.92□□□□□ -1.14
HMGCS1-204ENST00000507293 PHYHIPLQ96FC7 376 aa7.92□□□□□ -1.14
HMGCS1-204ENST00000507293 ST6GAL2Q96JF0 529 aa7.92□□□□□ -1.14
HMGCS1-204ENST00000507293 MARVELD1Q9BSK0 173 aa7.92□□□□□ -1.14
HMGCS1-204ENST00000507293 PAXXQ9BUH6 204 aa7.92□□□□□ -1.14
HMGCS1-204ENST00000507293 MRPL32Q9BYC8 188 aaKnown RBP7.92□□□□□ -1.14
HMGCS1-204ENST00000507293 SLC25A31Q9H0C2 315 aa7.92□□□□□ -1.14
HMGCS1-204ENST00000507293 OR51M1Q9H341 326 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms