RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 HHLA3Q9XRX5 114 aa3.89□□□□□ -1.79
GYPB-208ENST00000507009 TRAV5A0A0B4J249 113 aa3.88□□□□□ -1.79
GYPB-208ENST00000507009 DUXBA0A1W2PPF3 345 aa3.88□□□□□ -1.79
GYPB-208ENST00000507009 H3BQ15 152 aa3.88□□□□□ -1.79
GYPB-208ENST00000507009 AGPAT2O15120 278 aa3.88□□□□□ -1.79
GYPB-208ENST00000507009 MRPS12O15235 138 aaKnown RBP3.88□□□□□ -1.79
GYPB-208ENST00000507009 CRYGDP07320 174 aa3.88□□□□□ -1.79
GYPB-208ENST00000507009 SFTA3P0C7M3 94 aa3.88□□□□□ -1.79
GYPB-208ENST00000507009 CXCL2P19875 107 aa3.88□□□□□ -1.79
GYPB-208ENST00000507009 SRIP30626 198 aa3.88□□□□□ -1.79
GYPB-208ENST00000507009 CRYBA4P53673 196 aa3.88□□□□□ -1.79
GYPB-208ENST00000507009 CD300CQ08708 224 aa3.88□□□□□ -1.79
GYPB-208ENST00000507009 OPCMLQ14982 345 aa3.88□□□□□ -1.79
GYPB-208ENST00000507009 MORN5Q5VZ52 161 aa3.88□□□□□ -1.79
GYPB-208ENST00000507009 TEPPQ6URK8 271 aa3.88□□□□□ -1.79
GYPB-208ENST00000507009 EIF4E3Q8N5X7 224 aaKnown RBP3.88□□□□□ -1.79
GYPB-208ENST00000507009 C11orf72Q8NBR9 251 aa3.88□□□□□ -1.79
GYPB-208ENST00000507009 ZNF680Q8NEM1 530 aa3.88□□□□□ -1.79
GYPB-208ENST00000507009 MCFD2Q8NI22 146 aa3.88□□□□□ -1.79
GYPB-208ENST00000507009 ARPC5LQ9BPX5 153 aa3.88□□□□□ -1.79
GYPB-208ENST00000507009 TMEM70Q9BUB7 260 aa3.88□□□□□ -1.79
GYPB-208ENST00000507009 RCL1Q9Y2P8 373 aaKnown RBP3.88□□□□□ -1.79
GYPB-208ENST00000507009 PXMP4Q9Y6I8 212 aa3.88□□□□□ -1.79
GYPB-208ENST00000507009 PIGBOS1A0A0B4J2F0 54 aa3.87□□□□□ -1.79
GYPB-208ENST00000507009 KRTAP29-1A8MX34 341 aaPredicted RBP3.87□□□□□ -1.79
GYPB-208ENST00000507009 M0R3E3 92 aa3.87□□□□□ -1.79
GYPB-208ENST00000507009 LECT2O14960 151 aa3.87□□□□□ -1.79
GYPB-208ENST00000507009 SPINK4O60575 86 aa3.87□□□□□ -1.79
GYPB-208ENST00000507009 SFT2D2O95562 160 aa3.87□□□□□ -1.79
GYPB-208ENST00000507009 SLC25A5P05141 298 aaKnown RBP3.87□□□□□ -1.79
GYPB-208ENST00000507009 GPX1P07203 203 aa3.87□□□□□ -1.79
GYPB-208ENST00000507009 OR4E1P0C645 316 aa3.87□□□□□ -1.79
GYPB-208ENST00000507009 SLC25A6P12236 298 aa3.87□□□□□ -1.79
GYPB-208ENST00000507009 GYPEP15421 78 aa3.87□□□□□ -1.79
GYPB-208ENST00000507009 PPT1P50897 306 aa3.87□□□□□ -1.79
GYPB-208ENST00000507009 TCL1AP56279 114 aa3.87□□□□□ -1.79
GYPB-208ENST00000507009 PLP1P60201 277 aa3.87□□□□□ -1.79
GYPB-208ENST00000507009 PPP1R1AQ13522 171 aa3.87□□□□□ -1.79
GYPB-208ENST00000507009 FHL2Q14192 279 aa3.87□□□□□ -1.79
GYPB-208ENST00000507009 CTF1Q16619 201 aa3.87□□□□□ -1.79
GYPB-208ENST00000507009 TMEM128Q5BJH2 165 aa3.87□□□□□ -1.79
GYPB-208ENST00000507009 SERTAD4-AS1Q5TG53 156 aa3.87□□□□□ -1.79
GYPB-208ENST00000507009 C10orf113Q5VZT2 155 aa3.87□□□□□ -1.79
GYPB-208ENST00000507009 Q6ZQT7 251 aa3.87□□□□□ -1.79
GYPB-208ENST00000507009 ZNF546Q86UE3 836 aa3.87□□□□□ -1.79
GYPB-208ENST00000507009 Q8N814 137 aa3.87□□□□□ -1.79
GYPB-208ENST00000507009 NHLRC2Q8NBF2 726 aa3.87□□□□□ -1.79
GYPB-208ENST00000507009 OR10P1Q8NGE3 313 aa3.87□□□□□ -1.79
GYPB-208ENST00000507009 RAB2BQ8WUD1 216 aa3.87□□□□□ -1.79
GYPB-208ENST00000507009 ST6GAL2Q96JF0 529 aa3.87□□□□□ -1.79
GYPB-208ENST00000507009 SOSTQ9BQB4 213 aa3.87□□□□□ -1.79
GYPB-208ENST00000507009 NPVFQ9HCQ7 196 aa3.87□□□□□ -1.79
GYPB-208ENST00000507009 RNF24Q9Y225 148 aa3.87□□□□□ -1.79
GYPB-208ENST00000507009 HMCN2Q8NDA2 5059 aa3.87□□□□□ -1.79
GYPB-208ENST00000507009 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.86□□□□□ -1.79
GYPB-208ENST00000507009 IGKV2-40A0A087WW87 121 aaPredicted RBP3.86□□□□□ -1.79
GYPB-208ENST00000507009 LOC100131303A0A0U1RQF7 123 aa3.86□□□□□ -1.79
GYPB-208ENST00000507009 LRCOL1A6NCL2 159 aa3.86□□□□□ -1.79
GYPB-208ENST00000507009 K7EQD1 137 aa3.86□□□□□ -1.79
GYPB-208ENST00000507009 CTDSPLO15194 276 aa3.86□□□□□ -1.79
GYPB-208ENST00000507009 MPDU1O75352 247 aa3.86□□□□□ -1.79
GYPB-208ENST00000507009 IGKV2D-40P01614 121 aaPredicted RBP3.86□□□□□ -1.79
GYPB-208ENST00000507009 IGHV3-30P01768 117 aa3.86□□□□□ -1.79
GYPB-208ENST00000507009 IGHV3-33P01772 117 aa3.86□□□□□ -1.79
GYPB-208ENST00000507009 IGHV3-30-3P0DP02 117 aa3.86□□□□□ -1.79
GYPB-208ENST00000507009 IGHV3-30-5P0DP03 117 aa3.86□□□□□ -1.79
GYPB-208ENST00000507009 FAUP35544 74 aaKnown RBP3.86□□□□□ -1.79
GYPB-208ENST00000507009 SLAQ13239 276 aa3.86□□□□□ -1.79
GYPB-208ENST00000507009 SPCS2Q15005 226 aa3.86□□□□□ -1.79
GYPB-208ENST00000507009 ANXA2RQ3ZCQ2 193 aa3.86□□□□□ -1.79
GYPB-208ENST00000507009 LINC01620Q4KN68 170 aa3.86□□□□□ -1.79
GYPB-208ENST00000507009 MUC21Q5SSG8 566 aa3.86□□□□□ -1.79
GYPB-208ENST00000507009 FAM122CQ6P4D5 195 aa3.86□□□□□ -1.79
GYPB-208ENST00000507009 LRTM2Q8N967 370 aa3.86□□□□□ -1.79
GYPB-208ENST00000507009 SVIPQ8NHG7 77 aa3.86□□□□□ -1.79
GYPB-208ENST00000507009 DEFB104AQ8WTQ1 72 aa3.86□□□□□ -1.79
GYPB-208ENST00000507009 NTN5Q8WTR8 489 aaPredicted RBP3.86□□□□□ -1.79
GYPB-208ENST00000507009 BLNKQ8WV28 456 aa3.86□□□□□ -1.79
GYPB-208ENST00000507009 TMEM37Q8WXS4 190 aa3.86□□□□□ -1.79
GYPB-208ENST00000507009 SAT2Q96F10 170 aaPredicted RBP3.86□□□□□ -1.79
GYPB-208ENST00000507009 ZNF479Q96JC4 524 aa3.86□□□□□ -1.79
GYPB-208ENST00000507009 ODF3Q96PU9 254 aa3.86□□□□□ -1.79
GYPB-208ENST00000507009 VGLL1Q99990 258 aa3.86□□□□□ -1.79
GYPB-208ENST00000507009 GSKIPQ9P0R6 139 aa3.86□□□□□ -1.79
GYPB-208ENST00000507009 RSL24D1Q9UHA3 163 aaKnown RBP3.86□□□□□ -1.79
GYPB-208ENST00000507009 TIMM9Q9Y5J7 89 aa3.86□□□□□ -1.79
GYPB-208ENST00000507009 IGHV1OR15-1A0A075B7D0 117 aa3.85□□□□□ -1.79
GYPB-208ENST00000507009 IGHV3-16A0A0C4DH30 117 aa3.85□□□□□ -1.79
GYPB-208ENST00000507009 FABP12A6NFH5 140 aa3.85□□□□□ -1.79
GYPB-208ENST00000507009 IGLC2P0DOY2 106 aa3.85□□□□□ -1.79
GYPB-208ENST00000507009 ARL16Q0P5N6 197 aa3.85□□□□□ -1.79
GYPB-208ENST00000507009 PYDC2Q56P42 97 aa3.85□□□□□ -1.79
GYPB-208ENST00000507009 TMEM78Q5T7P6 136 aa3.85□□□□□ -1.79
GYPB-208ENST00000507009 PRR9Q5T870 116 aa3.85□□□□□ -1.79
GYPB-208ENST00000507009 PXDC1Q5TGL8 231 aa3.85□□□□□ -1.79
GYPB-208ENST00000507009 MIC13Q5XKP0 118 aa3.85□□□□□ -1.79
GYPB-208ENST00000507009 EXOC3-AS1Q8N2X6 119 aa3.85□□□□□ -1.79
GYPB-208ENST00000507009 TOMM5Q8N4H5 51 aa3.85□□□□□ -1.79
GYPB-208ENST00000507009 C10orf126Q8N4M7 172 aa3.85□□□□□ -1.79
GYPB-208ENST00000507009 LINC00477Q96M19 166 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms