RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 VMO1Q7Z5L0 202 aa7.56□□□□□ -1.2
PHF3-208ENST00000506783 OR10AG1Q8NH19 301 aa7.56□□□□□ -1.2
PHF3-208ENST00000506783 ZNF502Q8TBZ5 544 aa7.56□□□□□ -1.2
PHF3-208ENST00000506783 C16orf92Q96LL3 132 aa7.56□□□□□ -1.2
PHF3-208ENST00000506783 CBY1Q9Y3M2 126 aa7.56□□□□□ -1.2
PHF3-208ENST00000506783 B9A039 149 aa7.56□□□□□ -1.2
PHF3-208ENST00000506783 LEPP41159 167 aa7.56□□□□□ -1.2
PHF3-208ENST00000506783 GATA4P43694 442 aa7.56□□□□□ -1.2
PHF3-208ENST00000506783 TEX36Q5VZQ5 186 aa7.56□□□□□ -1.2
PHF3-208ENST00000506783 MBD6Q96DN6 1003 aa7.56□□□□□ -1.2
PHF3-208ENST00000506783 NDFIP1Q9BT67 221 aa7.56□□□□□ -1.2
PHF3-208ENST00000506783 C19orf24Q9BVV8 132 aa7.56□□□□□ -1.2
PHF3-208ENST00000506783 IGHV3-64A0A075B6Q5 118 aa7.55□□□□□ -1.2
PHF3-208ENST00000506783 A0A1B0GWJ7 208 aa7.55□□□□□ -1.2
PHF3-208ENST00000506783 HSPB8Q9UJY1 196 aa7.55□□□□□ -1.2
PHF3-208ENST00000506783 H3BVH4 76 aa7.55□□□□□ -1.2
PHF3-208ENST00000506783 ATP5J2P56134 94 aa7.55□□□□□ -1.2
PHF3-208ENST00000506783 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.55□□□□□ -1.2
PHF3-208ENST00000506783 IL17RELQ6ZVW7 336 aa7.55□□□□□ -1.2
PHF3-208ENST00000506783 ZNF414Q96IQ9 312 aa7.55□□□□□ -1.2
PHF3-208ENST00000506783 C1RLQ9NZP8 487 aa7.55□□□□□ -1.2
PHF3-208ENST00000506783 CEACAM3P40198 252 aa7.55□□□□□ -1.2
PHF3-208ENST00000506783 ANKRD39Q53RE8 183 aa7.55□□□□□ -1.2
PHF3-208ENST00000506783 ZNF491Q8N8L2 437 aa7.55□□□□□ -1.2
PHF3-208ENST00000506783 FMC1Q96HJ9 113 aa7.55□□□□□ -1.2
PHF3-208ENST00000506783 BPESC1Q9GZL8 116 aa7.55□□□□□ -1.2
PHF3-208ENST00000506783 NIPBLQ6KC79 2804 aaeCLIP7.55□□□□□ -1.26e-6■■□□□ 12.8
PHF3-208ENST00000506783 TEP1Q99973 2627 aaKnown RBP7.55□□□□□ -1.2
PHF3-208ENST00000506783 NPYP01303 97 aa7.54□□□□□ -1.2
PHF3-208ENST00000506783 EFNA4P52798 201 aa7.54□□□□□ -1.2
PHF3-208ENST00000506783 FER1L6-AS1Q8NA97 138 aa7.54□□□□□ -1.2
PHF3-208ENST00000506783 MEGF9Q9H1U4 602 aa7.54□□□□□ -1.2
PHF3-208ENST00000506783 EGR2P11161 476 aaPredicted RBP7.54□□□□□ -1.2
PHF3-208ENST00000506783 GP9P14770 177 aa7.54□□□□□ -1.2
PHF3-208ENST00000506783 HIST1H1AQ02539 215 aaPredicted RBP7.54□□□□□ -1.2
PHF3-208ENST00000506783 JMJD8Q96S16 334 aa7.54□□□□□ -1.2
PHF3-208ENST00000506783 CHODLQ9H9P2 273 aa7.54□□□□□ -1.2
PHF3-208ENST00000506783 SAP30O75446 220 aa7.54□□□□□ -1.2
PHF3-208ENST00000506783 IGF1P05019 195 aa7.54□□□□□ -1.2
PHF3-208ENST00000506783 OTORQ9NRC9 128 aa7.54□□□□□ -1.2
PHF3-208ENST00000506783 NHP2Q9NX24 153 aaKnown RBP7.54□□□□□ -1.2
PHF3-208ENST00000506783 TRBV19A0A075B6N1 114 aa7.53□□□□□ -1.2
PHF3-208ENST00000506783 C2orf70A6NJV1 201 aa7.53□□□□□ -1.2
PHF3-208ENST00000506783 K7EIM0 57 aa7.53□□□□□ -1.2
PHF3-208ENST00000506783 TOMM40O96008 361 aa7.53□□□□□ -1.2
PHF3-208ENST00000506783 COX6B1P14854 86 aa7.53□□□□□ -1.2
PHF3-208ENST00000506783 ZNF80P51504 273 aaPredicted RBP7.53□□□□□ -1.2
PHF3-208ENST00000506783 SMIM15Q7Z3B0 74 aa7.53□□□□□ -1.2
PHF3-208ENST00000506783 Q8N976 141 aa7.53□□□□□ -1.2
PHF3-208ENST00000506783 NEU4Q8WWR8 484 aaPredicted RBP7.53□□□□□ -1.2
PHF3-208ENST00000506783 CRIP1P50238 77 aa7.53□□□□□ -1.2
PHF3-208ENST00000506783 C5orf64Q2M2E5 130 aa7.53□□□□□ -1.2
PHF3-208ENST00000506783 ORMDL3Q8N138 153 aa7.53□□□□□ -1.2
PHF3-208ENST00000506783 URB1-AS1Q96HZ7 61 aa7.53□□□□□ -1.2
PHF3-208ENST00000506783 SIGLEC8Q9NYZ4 499 aa7.53□□□□□ -1.2
PHF3-208ENST00000506783 COX11Q9Y6N1 276 aa7.53□□□□□ -1.2
PHF3-208ENST00000506783 ZFP36P26651 326 aaKnown RBP7.53□□□□□ -1.2
PHF3-208ENST00000506783 KIR3DS1Q14943 382 aa7.53□□□□□ -1.2
PHF3-208ENST00000506783 TMEM95Q3KNT9 176 aa7.53□□□□□ -1.2
PHF3-208ENST00000506783 DNLZQ5SXM8 178 aa7.53□□□□□ -1.2
PHF3-208ENST00000506783 FAM169BQ8N8A8 192 aa7.53□□□□□ -1.2
PHF3-208ENST00000506783 TRGV9Q99603 122 aa7.53□□□□□ -1.2
PHF3-208ENST00000506783 IGHV3-73A0A0B4J1V6 119 aa7.52□□□□□ -1.21
PHF3-208ENST00000506783 TRAV40A0A0B4J280 105 aa7.52□□□□□ -1.21
PHF3-208ENST00000506783 TEX22C9J3V5 150 aa7.52□□□□□ -1.21
PHF3-208ENST00000506783 PSG9Q00887 426 aa7.52□□□□□ -1.21
PHF3-208ENST00000506783 ATP6V0E1O15342 81 aa7.52□□□□□ -1.21
PHF3-208ENST00000506783 PSG3Q16557 428 aa7.52□□□□□ -1.21
PHF3-208ENST00000506783 TMEM249Q2WGJ8 235 aa7.52□□□□□ -1.21
PHF3-208ENST00000506783 COX19Q49B96 90 aa7.52□□□□□ -1.21
PHF3-208ENST00000506783 TMEM78Q5T7P6 136 aa7.52□□□□□ -1.21
PHF3-208ENST00000506783 AMTNQ6UX39 209 aa7.52□□□□□ -1.21
PHF3-208ENST00000506783 BSNQ9UPA5 3926 aa7.52□□□□□ -1.21
PHF3-208ENST00000506783 FAM231BA6NCW3 169 aa7.52□□□□□ -1.21
PHF3-208ENST00000506783 TRGV3P03979 118 aa7.52□□□□□ -1.21
PHF3-208ENST00000506783 SAA4P35542 130 aa7.52□□□□□ -1.21
PHF3-208ENST00000506783 POU2AF1Q16633 256 aa7.52□□□□□ -1.21
PHF3-208ENST00000506783 FAM162BQ5T6X4 162 aa7.52□□□□□ -1.21
PHF3-208ENST00000506783 ZC2HC1BQ5TFG8 222 aa7.52□□□□□ -1.21
PHF3-208ENST00000506783 RNASE4P34096 147 aaKnown RBP7.51□□□□□ -1.21
PHF3-208ENST00000506783 MRPL51Q4U2R6 128 aaKnown RBP7.51□□□□□ -1.21
PHF3-208ENST00000506783 SCGB1D4Q6XE38 83 aa7.51□□□□□ -1.21
PHF3-208ENST00000506783 S100A7AQ86SG5 101 aa7.51□□□□□ -1.21
PHF3-208ENST00000506783 C14orf178Q8N769 122 aaPredicted RBP7.51□□□□□ -1.21
PHF3-208ENST00000506783 IFI27L1Q96BM0 104 aa7.51□□□□□ -1.21
PHF3-208ENST00000506783 RPL7P18124 248 aaKnown RBP7.51□□□□□ -1.21
PHF3-208ENST00000506783 UBE2V1Q13404 147 aa7.51□□□□□ -1.21
PHF3-208ENST00000506783 OR2K2Q8NGT1 345 aa7.51□□□□□ -1.21
PHF3-208ENST00000506783 GCN1Q92616 2671 aaKnown RBP7.51□□□□□ -1.21
PHF3-208ENST00000506783 PSMB11A5LHX3 300 aa7.51□□□□□ -1.21
PHF3-208ENST00000506783 NUP37Q8NFH4 326 aa7.51□□□□□ -1.21
PHF3-208ENST00000506783 FLNAP21333 2647 aaKnown RBP7.5□□□□□ -1.21
PHF3-208ENST00000506783 LOC107984156A0A0G2JMH3 177 aa7.5□□□□□ -1.21
PHF3-208ENST00000506783 I3L2K1 104 aa7.5□□□□□ -1.21
PHF3-208ENST00000506783 SMAD7O15105 426 aaKnown RBP7.5□□□□□ -1.21
PHF3-208ENST00000506783 ARL17AQ8IVW1 177 aa7.5□□□□□ -1.21
PHF3-208ENST00000506783 TMEM158Q8WZ71 300 aa7.5□□□□□ -1.21
PHF3-208ENST00000506783 SHANK2-AS3Q9BTD1 123 aa7.5□□□□□ -1.21
PHF3-208ENST00000506783 IGHV3OR16-12A0A075B7B8 117 aa7.5□□□□□ -1.21
PHF3-208ENST00000506783 A0A087WWL8 130 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms