RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 LINC00477Q96M19 166 aa12.72□□□□□ -0.37
SMN1-204ENST00000506163 SPART-AS1P0CW21 52 aa12.71□□□□□ -0.37
SMN1-204ENST00000506163 TSPOP30536 169 aa12.71□□□□□ -0.37
SMN1-204ENST00000506163 ZNF726P1Q15940 193 aa12.71□□□□□ -0.37
SMN1-204ENST00000506163 KCNRGQ8N5I3 272 aa12.71□□□□□ -0.37
SMN1-204ENST00000506163 GNPNAT1Q96EK6 184 aaPredicted RBP12.71□□□□□ -0.37
SMN1-204ENST00000506163 PGPA6NDG6 321 aa12.71□□□□□ -0.38
SMN1-204ENST00000506163 HMSDA8MTL9 139 aa12.71□□□□□ -0.38
SMN1-204ENST00000506163 KLLNB2CW77 178 aa12.71□□□□□ -0.38
SMN1-204ENST00000506163 TAAR5O14804 337 aa12.71□□□□□ -0.38
SMN1-204ENST00000506163 JTBO76095 146 aa12.71□□□□□ -0.38
SMN1-204ENST00000506163 HTN1P15515 57 aa12.71□□□□□ -0.38
SMN1-204ENST00000506163 TAS2R60P59551 318 aa12.71□□□□□ -0.38
SMN1-204ENST00000506163 CD300CQ08708 224 aa12.71□□□□□ -0.38
SMN1-204ENST00000506163 Q6ZQT7 251 aa12.71□□□□□ -0.38
SMN1-204ENST00000506163 TMEM256Q8N2U0 113 aa12.71□□□□□ -0.38
SMN1-204ENST00000506163 SUN5Q8TC36 379 aa12.71□□□□□ -0.38
SMN1-204ENST00000506163 KLK5Q9Y337 293 aaPredicted RBP12.71□□□□□ -0.38
SMN1-204ENST00000506163 TRAV12-3A0A0B4J271 114 aa12.7□□□□□ -0.38
SMN1-204ENST00000506163 DIRC3C9JPN6 131 aa12.7□□□□□ -0.38
SMN1-204ENST00000506163 MBP02144 154 aa12.7□□□□□ -0.38
SMN1-204ENST00000506163 GCHFRP30047 84 aa12.7□□□□□ -0.38
SMN1-204ENST00000506163 LEPP41159 167 aa12.7□□□□□ -0.38
SMN1-204ENST00000506163 PRR9Q5T870 116 aa12.7□□□□□ -0.38
SMN1-204ENST00000506163 ZFAND2AQ8N6M9 145 aa12.7□□□□□ -0.38
SMN1-204ENST00000506163 OTORQ9NRC9 128 aa12.7□□□□□ -0.38
SMN1-204ENST00000506163 ZNF492Q9P255 531 aa12.7□□□□□ -0.38
SMN1-204ENST00000506163 C11orf94C9JXX5 98 aa12.69□□□□□ -0.38
SMN1-204ENST00000506163 H7BYZ3 331 aa12.69□□□□□ -0.38
SMN1-204ENST00000506163 ZNF324O75467 553 aaPredicted RBP12.69□□□□□ -0.38
SMN1-204ENST00000506163 CRISP2P16562 243 aa12.69□□□□□ -0.38
SMN1-204ENST00000506163 ZNF345Q14585 488 aa12.69□□□□□ -0.38
SMN1-204ENST00000506163 Q8TAT8 98 aa12.69□□□□□ -0.38
SMN1-204ENST00000506163 C2CD4CQ8TF44 421 aa12.69□□□□□ -0.38
SMN1-204ENST00000506163 HYLS1Q96M11 299 aa12.69□□□□□ -0.38
SMN1-204ENST00000506163 ACTR3CQ9C0K3 210 aaPredicted RBP12.69□□□□□ -0.38
SMN1-204ENST00000506163 KMT2AQ03164 3969 aa12.69□□□□□ -0.38
SMN1-204ENST00000506163 TRAV10A0A0B4J240 114 aa12.68□□□□□ -0.38
SMN1-204ENST00000506163 SLC25A5P05141 298 aaKnown RBP12.68□□□□□ -0.38
SMN1-204ENST00000506163 BTN1A1Q13410 526 aa12.68□□□□□ -0.38
SMN1-204ENST00000506163 C20orf144Q9BQM9 153 aa12.68□□□□□ -0.38
SMN1-204ENST00000506163 RBAKDNA6NC62 111 aa12.67□□□□□ -0.38
SMN1-204ENST00000506163 IGLL5B9A064 214 aa12.67□□□□□ -0.38
SMN1-204ENST00000506163 RNASE4P34096 147 aaKnown RBP12.67□□□□□ -0.38
SMN1-204ENST00000506163 CSN1S1P47710 185 aa12.67□□□□□ -0.38
SMN1-204ENST00000506163 ZNF138P52744 262 aa12.67□□□□□ -0.38
SMN1-204ENST00000506163 TMEM78Q5T7P6 136 aa12.67□□□□□ -0.38
SMN1-204ENST00000506163 RNASE8Q8TDE3 154 aaKnown RBP12.67□□□□□ -0.38
SMN1-204ENST00000506163 LINC00476Q8WZB0 136 aa12.67□□□□□ -0.38
SMN1-204ENST00000506163 ARPC5LQ9BPX5 153 aa12.67□□□□□ -0.38
SMN1-204ENST00000506163 NIPSNAP3BQ9BS92 247 aa12.67□□□□□ -0.38
SMN1-204ENST00000506163 DEFB131BA0A096LNP1 70 aa12.66□□□□□ -0.38
SMN1-204ENST00000506163 C7orf71A4D174 169 aa12.66□□□□□ -0.38
SMN1-204ENST00000506163 GNG5P63218 68 aa12.66□□□□□ -0.38
SMN1-204ENST00000506163 TMPRSS5Q9H3S3 457 aa12.66□□□□□ -0.38
SMN1-204ENST00000506163 APLNQ9ULZ1 77 aa12.66□□□□□ -0.38
SMN1-204ENST00000506163 A0A0D9SG52 128 aa12.65□□□□□ -0.38
SMN1-204ENST00000506163 CXorf1O96002 111 aa12.65□□□□□ -0.38
SMN1-204ENST00000506163 RXFP4Q8TDU9 374 aa12.65□□□□□ -0.38
SMN1-204ENST00000506163 RPH3ALQ9UNE2 315 aa12.65□□□□□ -0.38
SMN1-204ENST00000506163 CTXND1A0A1B0GTU2 59 aa12.64□□□□□ -0.39
SMN1-204ENST00000506163 NMBP08949 121 aa12.64□□□□□ -0.39
SMN1-204ENST00000506163 FHITP49789 147 aa12.64□□□□□ -0.39
SMN1-204ENST00000506163 AKR1C8PQ5T2L2 129 aa12.64□□□□□ -0.39
SMN1-204ENST00000506163 GOLT1AQ6ZVE7 132 aa12.64□□□□□ -0.39
SMN1-204ENST00000506163 TVP23CQ96ET8 276 aa12.64□□□□□ -0.39
SMN1-204ENST00000506163 C16orf74Q96GX8 76 aa12.64□□□□□ -0.39
SMN1-204ENST00000506163 TRAV8-1A0A0A6YYK1 113 aa12.63□□□□□ -0.39
SMN1-204ENST00000506163 GGTLC3B5MD39 225 aa12.63□□□□□ -0.39
SMN1-204ENST00000506163 BCL2L11O43521 198 aa12.63□□□□□ -0.39
SMN1-204ENST00000506163 GPX1P07203 203 aa12.63□□□□□ -0.39
SMN1-204ENST00000506163 FGF8P55075 233 aaPredicted RBP12.63□□□□□ -0.39
SMN1-204ENST00000506163 TMUB2Q71RG4 321 aa12.63□□□□□ -0.39
SMN1-204ENST00000506163 TCTE3Q8IZS6 198 aa12.63□□□□□ -0.39
SMN1-204ENST00000506163 CMTM2Q8TAZ6 248 aa12.63□□□□□ -0.39
SMN1-204ENST00000506163 TMEM263Q8WUH6 116 aaKnown RBP12.63□□□□□ -0.39
SMN1-204ENST00000506163 NOP10Q9NPE3 64 aaKnown RBP12.63□□□□□ -0.39
SMN1-204ENST00000506163 VPS13DQ5THJ4 4388 aa12.63□□□□□ -0.39
SMN1-204ENST00000506163 hCG_2014768A0A024R1R8 64 aa12.62□□□□□ -0.39
SMN1-204ENST00000506163 IGHV4-4A0A075B6R2 117 aa12.62□□□□□ -0.39
SMN1-204ENST00000506163 TRBV7-9A0A0J9YWB2 115 aa12.62□□□□□ -0.39
SMN1-204ENST00000506163 TEX48A0A1B0GUV7 120 aa12.62□□□□□ -0.39
SMN1-204ENST00000506163 LYRM9A8MSI8 78 aa12.62□□□□□ -0.39
SMN1-204ENST00000506163 LY6G6CO95867 125 aa12.62□□□□□ -0.39
SMN1-204ENST00000506163 DAD1P61803 113 aa12.62□□□□□ -0.39
SMN1-204ENST00000506163 LGALSLQ3ZCW2 172 aaPredicted RBP12.62□□□□□ -0.39
SMN1-204ENST00000506163 ZNF493Q6ZR52 646 aa12.62□□□□□ -0.39
SMN1-204ENST00000506163 ARL6IP6Q8N6S5 226 aa12.62□□□□□ -0.39
SMN1-204ENST00000506163 SGK494Q96LW2 274 aa12.62□□□□□ -0.39
SMN1-204ENST00000506163 PYGO2Q9BRQ0 406 aa12.62□□□□□ -0.39
SMN1-204ENST00000506163 DEFB130BP0DP73 79 aa12.62□□□□□ -0.39
SMN1-204ENST00000506163 DEFB130AP0DP74 79 aa12.62□□□□□ -0.39
SMN1-204ENST00000506163 SUMO1P63165 101 aaKnown RBP12.62□□□□□ -0.39
SMN1-204ENST00000506163 FAM74A1Q5RGS3 127 aa12.62□□□□□ -0.39
SMN1-204ENST00000506163 ZNF471Q9BX82 626 aaPredicted RBP12.62□□□□□ -0.39
SMN1-204ENST00000506163 TMEM167BQ9NRX6 74 aa12.62□□□□□ -0.39
SMN1-204ENST00000506163 TP53TG3Q9ULZ0 132 aa12.62□□□□□ -0.39
SMN1-204ENST00000506163 TIMM8BQ9Y5J9 83 aaPredicted RBP12.62□□□□□ -0.39
SMN1-204ENST00000506163 HTN3P15516 51 aa12.61□□□□□ -0.39
SMN1-204ENST00000506163 C11orf72Q8NBR9 251 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms