RNA–Protein interactions for RNA: ENST00000506147.5

MATR3-235, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-235ENST00000506147 TMEM78Q5T7P6 136 aa11.75□□□□□ -0.53
MATR3-235ENST00000506147 SMIM12Q96EX1 92 aa11.75□□□□□ -0.53
MATR3-235ENST00000506147 ODF3Q96PU9 254 aa11.75□□□□□ -0.53
MATR3-235ENST00000506147 AGPAT4-IT1Q9H0P7 198 aa11.75□□□□□ -0.53
MATR3-235ENST00000506147 ZFP30Q9Y2G7 519 aa11.75□□□□□ -0.53
MATR3-235ENST00000506147 C9JCJ5 164 aa11.74□□□□□ -0.53
MATR3-235ENST00000506147 H3BMM0 161 aa11.74□□□□□ -0.53
MATR3-235ENST00000506147 IGLV2-11P01706 119 aa11.74□□□□□ -0.53
MATR3-235ENST00000506147 RPL35P42766 123 aaKnown RBP11.74□□□□□ -0.53
MATR3-235ENST00000506147 ZNF138P52744 262 aa11.74□□□□□ -0.53
MATR3-235ENST00000506147 KRTAP10-11P60412 298 aa11.74□□□□□ -0.53
MATR3-235ENST00000506147 FLI1Q01543 452 aaPredicted RBP11.74□□□□□ -0.53
MATR3-235ENST00000506147 SOHLH1Q5JUK2 328 aa11.74□□□□□ -0.53
MATR3-235ENST00000506147 SAPCD1Q5SSQ6 148 aa11.74□□□□□ -0.53
MATR3-235ENST00000506147 Q8N1Y9 231 aa11.74□□□□□ -0.53
MATR3-235ENST00000506147 VGLL1Q99990 258 aa11.74□□□□□ -0.53
MATR3-235ENST00000506147 PARLQ9H300 379 aa11.74□□□□□ -0.53
MATR3-235ENST00000506147 ZNF492Q9P255 531 aa11.74□□□□□ -0.53
MATR3-235ENST00000506147 PSG8Q9UQ74 426 aa11.74□□□□□ -0.53
MATR3-235ENST00000506147 TMEM218A2RU14 115 aa11.73□□□□□ -0.53
MATR3-235ENST00000506147 F6UB75 175 aa11.73□□□□□ -0.53
MATR3-235ENST00000506147 HIST1H1AQ02539 215 aaPredicted RBP11.73□□□□□ -0.53
MATR3-235ENST00000506147 GDF5OSQ5U4N7 250 aa11.73□□□□□ -0.53
MATR3-235ENST00000506147 APRG1Q8IVJ8 170 aa11.73□□□□□ -0.53
MATR3-235ENST00000506147 STHQ8IWL8 128 aa11.73□□□□□ -0.53
MATR3-235ENST00000506147 LINC00479Q96M42 142 aa11.73□□□□□ -0.53
MATR3-235ENST00000506147 LY96Q9Y6Y9 160 aa11.73□□□□□ -0.53
MATR3-235ENST00000506147 LTAP01374 205 aa11.72□□□□□ -0.53
MATR3-235ENST00000506147 SFTA3P0C7M3 94 aa11.72□□□□□ -0.53
MATR3-235ENST00000506147 ACTL10Q5JWF8 245 aa11.72□□□□□ -0.53
MATR3-235ENST00000506147 FAM19A4Q96LR4 140 aa11.72□□□□□ -0.53
MATR3-235ENST00000506147 NDFIP1Q9BT67 221 aa11.72□□□□□ -0.53
MATR3-235ENST00000506147 DERL1Q9BUN8 251 aa11.72□□□□□ -0.53
MATR3-235ENST00000506147 TRAV8-1A0A0A6YYK1 113 aa11.71□□□□□ -0.53
MATR3-235ENST00000506147 TRAV34A0A0B4J273 112 aa11.71□□□□□ -0.53
MATR3-235ENST00000506147 KNCNA6PVL3 124 aa11.71□□□□□ -0.53
MATR3-235ENST00000506147 ZNF727A8MUV8 499 aa11.71□□□□□ -0.53
MATR3-235ENST00000506147 GNG4P50150 75 aa11.71□□□□□ -0.53
MATR3-235ENST00000506147 DEFB1P60022 68 aa11.71□□□□□ -0.53
MATR3-235ENST00000506147 ERCC8Q13216 396 aa11.71□□□□□ -0.53
MATR3-235ENST00000506147 COX8CQ7Z4L0 72 aa11.71□□□□□ -0.53
MATR3-235ENST00000506147 Q86TA4 180 aa11.71□□□□□ -0.53
MATR3-235ENST00000506147 TRPT1Q86TN4 253 aaKnown RBP11.71□□□□□ -0.53
MATR3-235ENST00000506147 SMIM7Q9BQ49 75 aa11.71□□□□□ -0.53
MATR3-235ENST00000506147 NOTCH3Q9UM47 2321 aa11.7□□□□□ -0.54
MATR3-235ENST00000506147 A8MZ25 164 aa11.7□□□□□ -0.54
MATR3-235ENST00000506147 KRBOX1C9JBD0 128 aa11.7□□□□□ -0.54
MATR3-235ENST00000506147 ZNF705DP0CH99 300 aaPredicted RBP11.7□□□□□ -0.54
MATR3-235ENST00000506147 ZNF705BP0CI00 300 aaPredicted RBP11.7□□□□□ -0.54
MATR3-235ENST00000506147 CT45A10P0DMU9 189 aa11.7□□□□□ -0.54
MATR3-235ENST00000506147 CRISP2P16562 243 aa11.7□□□□□ -0.54
MATR3-235ENST00000506147 TSPOP30536 169 aa11.7□□□□□ -0.54
MATR3-235ENST00000506147 CEBPGP53567 150 aa11.7□□□□□ -0.54
MATR3-235ENST00000506147 NUTF2P61970 127 aaKnown RBP11.7□□□□□ -0.54
MATR3-235ENST00000506147 PRNTQ86SH4 94 aa11.7□□□□□ -0.54
MATR3-235ENST00000506147 BAGE2Q86Y30 109 aa11.7□□□□□ -0.54
MATR3-235ENST00000506147 TMEM183AQ8IXX5 376 aa11.7□□□□□ -0.54
MATR3-235ENST00000506147 SLC7A5P1Q8MH63 180 aa11.7□□□□□ -0.54
MATR3-235ENST00000506147 OR4B1Q8NGF8 309 aa11.7□□□□□ -0.54
MATR3-235ENST00000506147 IGF2BP2-AS1Q96M15 143 aa11.7□□□□□ -0.54
MATR3-235ENST00000506147 PRR25Q96S07 402 aa11.7□□□□□ -0.54
MATR3-235ENST00000506147 MLST8Q9BVC4 326 aa11.7□□□□□ -0.54
MATR3-235ENST00000506147 SEC11CQ9BY50 192 aa11.7□□□□□ -0.54
MATR3-235ENST00000506147 AMBPP02760 352 aa11.69□□□□□ -0.54
MATR3-235ENST00000506147 LEPP41159 167 aa11.69□□□□□ -0.54
MATR3-235ENST00000506147 ZNF124Q15973 351 aa11.69□□□□□ -0.54
MATR3-235ENST00000506147 TMEM241Q24JQ0 296 aa11.69□□□□□ -0.54
MATR3-235ENST00000506147 ZNF674Q2M3X9 581 aa11.69□□□□□ -0.54
MATR3-235ENST00000506147 CENPWQ5EE01 88 aa11.69□□□□□ -0.54
MATR3-235ENST00000506147 C10orf91Q5T1B1 145 aa11.69□□□□□ -0.54
MATR3-235ENST00000506147 MORN3Q6PF18 240 aaPredicted RBP11.69□□□□□ -0.54
MATR3-235ENST00000506147 AMTNQ6UX39 209 aa11.69□□□□□ -0.54
MATR3-235ENST00000506147 DEFB125Q8N687 156 aa11.69□□□□□ -0.54
MATR3-235ENST00000506147 CITED4Q96RK1 184 aa11.69□□□□□ -0.54
MATR3-235ENST00000506147 BIN3Q9NQY0 253 aa11.69□□□□□ -0.54
MATR3-235ENST00000506147 SORL1Q92673 2214 aa11.69□□□□□ -0.54
MATR3-235ENST00000506147 TRBV20OR9-2A0A075B6H5 130 aa11.68□□□□□ -0.54
MATR3-235ENST00000506147 SGK494Q96LW2 274 aa11.68□□□□□ -0.54
MATR3-235ENST00000506147 NIPSNAP3BQ9BS92 247 aa11.68□□□□□ -0.54
MATR3-235ENST00000506147 SRD5A3Q9H8P0 318 aa11.68□□□□□ -0.54
MATR3-235ENST00000506147 NAT8Q9UHE5 227 aa11.68□□□□□ -0.54
MATR3-235ENST00000506147 KLLNB2CW77 178 aa11.67□□□□□ -0.54
MATR3-235ENST00000506147 F8W036 122 aa11.67□□□□□ -0.54
MATR3-235ENST00000506147 IGLV2-8P01709 118 aa11.67□□□□□ -0.54
MATR3-235ENST00000506147 CDKN1BP46527 198 aa11.67□□□□□ -0.54
MATR3-235ENST00000506147 SMUG1Q53HV7 270 aa11.67□□□□□ -0.54
MATR3-235ENST00000506147 Q8TAT8 98 aa11.67□□□□□ -0.54
MATR3-235ENST00000506147 TVP23CQ96ET8 276 aa11.67□□□□□ -0.54
MATR3-235ENST00000506147 WFDC10AQ9H1F0 79 aa11.67□□□□□ -0.54
MATR3-235ENST00000506147 LOC102724200A0A096LPH7 203 aaPredicted RBP11.66□□□□□ -0.54
MATR3-235ENST00000506147 KIR2DL5BA0A0G2JN68 375 aa11.66□□□□□ -0.54
MATR3-235ENST00000506147 KIR2DL5BA0A0G2JPC4 375 aa11.66□□□□□ -0.54
MATR3-235ENST00000506147 PRB4P10163 310 aaPredicted RBP11.66□□□□□ -0.54
MATR3-235ENST00000506147 PNRC1Q12796 327 aaPredicted RBP11.66□□□□□ -0.54
MATR3-235ENST00000506147 KIR2DL5AQ8N109 375 aa11.66□□□□□ -0.54
MATR3-235ENST00000506147 ZFAND2AQ8N6M9 145 aa11.66□□□□□ -0.54
MATR3-235ENST00000506147 KIR2DL5BQ8NHK3 375 aa11.66□□□□□ -0.54
MATR3-235ENST00000506147 TUBA4BQ9H853 241 aa11.66□□□□□ -0.54
MATR3-235ENST00000506147 SDF2L1Q9HCN8 221 aa11.66□□□□□ -0.54
MATR3-235ENST00000506147 CARHSP1Q9Y2V2 147 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms