RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 AURKAIP1Q9NWT8 199 aaPredicted RBP7.76□□□□□ -1.17
TPM3-217ENST00000504663 PSG8Q9UQ74 426 aa7.76□□□□□ -1.17
TPM3-217ENST00000504663 ZNF256Q9Y2P7 627 aaPredicted RBP7.76□□□□□ -1.17
TPM3-217ENST00000504663 SERTM2A0A1B0GWG4 89 aa7.75□□□□□ -1.17
TPM3-217ENST00000504663 C7orf77A4D0Y5 90 aa7.75□□□□□ -1.17
TPM3-217ENST00000504663 RBAKDNA6NC62 111 aa7.75□□□□□ -1.17
TPM3-217ENST00000504663 NPIPB6E9PJ23 425 aa7.75□□□□□ -1.17
TPM3-217ENST00000504663 F6UB75 175 aa7.75□□□□□ -1.17
TPM3-217ENST00000504663 DNASE2O00115 360 aaPredicted RBP7.75□□□□□ -1.17
TPM3-217ENST00000504663 LCE2BO14633 110 aa7.75□□□□□ -1.17
TPM3-217ENST00000504663 GCGP01275 180 aa7.75□□□□□ -1.17
TPM3-217ENST00000504663 FLI1Q01543 452 aaPredicted RBP7.75□□□□□ -1.17
TPM3-217ENST00000504663 PNRC1Q12796 327 aaPredicted RBP7.75□□□□□ -1.17
TPM3-217ENST00000504663 ERCC8Q13216 396 aa7.75□□□□□ -1.17
TPM3-217ENST00000504663 GDF5OSQ5U4N7 250 aa7.75□□□□□ -1.17
TPM3-217ENST00000504663 LINC00322Q6ZN03 302 aaPredicted RBP7.75□□□□□ -1.17
TPM3-217ENST00000504663 NHLRC2Q8NBF2 726 aa7.75□□□□□ -1.17
TPM3-217ENST00000504663 Q8TAT8 98 aa7.75□□□□□ -1.17
TPM3-217ENST00000504663 CMTM2Q8TAZ6 248 aa7.75□□□□□ -1.17
TPM3-217ENST00000504663 FAM19A4Q96LR4 140 aa7.75□□□□□ -1.17
TPM3-217ENST00000504663 CLEC5AQ9NY25 188 aa7.75□□□□□ -1.17
TPM3-217ENST00000504663 M0QZ24 198 aa7.74□□□□□ -1.17
TPM3-217ENST00000504663 SNAPINO95295 136 aa7.74□□□□□ -1.17
TPM3-217ENST00000504663 CRIP1P50238 77 aa7.74□□□□□ -1.17
TPM3-217ENST00000504663 OR5I1Q13606 314 aa7.74□□□□□ -1.17
TPM3-217ENST00000504663 RHEBQ15382 184 aa7.74□□□□□ -1.17
TPM3-217ENST00000504663 ADIRFQ15847 76 aa7.74□□□□□ -1.17
TPM3-217ENST00000504663 C9orf47Q6ZRZ4 202 aa7.74□□□□□ -1.17
TPM3-217ENST00000504663 SMIM12Q96EX1 92 aa7.74□□□□□ -1.17
TPM3-217ENST00000504663 C8orf49Q96NF6 230 aa7.74□□□□□ -1.17
TPM3-217ENST00000504663 AGPAT4-IT1Q9H0P7 198 aa7.74□□□□□ -1.17
TPM3-217ENST00000504663 PPP1R14DQ9NXH3 145 aa7.74□□□□□ -1.17
TPM3-217ENST00000504663 A0A087WWC5 75 aa7.73□□□□□ -1.17
TPM3-217ENST00000504663 TRAV25A0A0B4J276 109 aa7.73□□□□□ -1.17
TPM3-217ENST00000504663 A8MTW9 85 aa7.73□□□□□ -1.17
TPM3-217ENST00000504663 S100A9P06702 114 aaKnown RBP7.73□□□□□ -1.17
TPM3-217ENST00000504663 ZNF688P0C7X2 276 aa7.73□□□□□ -1.17
TPM3-217ENST00000504663 ZNF705DP0CH99 300 aaPredicted RBP7.73□□□□□ -1.17
TPM3-217ENST00000504663 ZNF705BP0CI00 300 aaPredicted RBP7.73□□□□□ -1.17
TPM3-217ENST00000504663 TFPI2P48307 235 aa7.73□□□□□ -1.17
TPM3-217ENST00000504663 GNG4P50150 75 aa7.73□□□□□ -1.17
TPM3-217ENST00000504663 ODF3L2Q3SX64 289 aa7.73□□□□□ -1.17
TPM3-217ENST00000504663 RNF212Q495C1 297 aa7.73□□□□□ -1.17
TPM3-217ENST00000504663 PRR9Q5T870 116 aa7.73□□□□□ -1.17
TPM3-217ENST00000504663 SAMD13Q5VXD3 122 aa7.73□□□□□ -1.17
TPM3-217ENST00000504663 BAGE2Q86Y30 109 aa7.73□□□□□ -1.17
TPM3-217ENST00000504663 WFDC3Q8IUB2 231 aa7.73□□□□□ -1.17
TPM3-217ENST00000504663 CBLN2Q8IUK8 224 aa7.73□□□□□ -1.17
TPM3-217ENST00000504663 TMEM183AQ8IXX5 376 aa7.73□□□□□ -1.17
TPM3-217ENST00000504663 ZC2HC1AQ96GY0 325 aa7.73□□□□□ -1.17
TPM3-217ENST00000504663 MAP6D1Q9H9H5 199 aa7.73□□□□□ -1.17
TPM3-217ENST00000504663 AGRNO00468 2067 aa7.72□□□□□ -1.17
TPM3-217ENST00000504663 COL6A5A8TX70 2615 aa7.72□□□□□ -1.17
TPM3-217ENST00000504663 C19orf71A6NCJ1 209 aa7.72□□□□□ -1.17
TPM3-217ENST00000504663 M0R036 132 aa7.72□□□□□ -1.17
TPM3-217ENST00000504663 CT45A10P0DMU9 189 aa7.72□□□□□ -1.17
TPM3-217ENST00000504663 CSN1S1P47710 185 aa7.72□□□□□ -1.17
TPM3-217ENST00000504663 ZNF80P51504 273 aaPredicted RBP7.72□□□□□ -1.17
TPM3-217ENST00000504663 UBE2G1P62253 170 aa7.72□□□□□ -1.17
TPM3-217ENST00000504663 RPL11P62913 178 aaKnown RBP7.72□□□□□ -1.17
TPM3-217ENST00000504663 ZNF124Q15973 351 aa7.72□□□□□ -1.17
TPM3-217ENST00000504663 PRNTQ86SH4 94 aa7.72□□□□□ -1.17
TPM3-217ENST00000504663 ZNF575Q86XF7 245 aa7.72□□□□□ -1.17
TPM3-217ENST00000504663 APRG1Q8IVJ8 170 aa7.72□□□□□ -1.17
TPM3-217ENST00000504663 ZNF738Q8NE65 137 aa7.72□□□□□ -1.17
TPM3-217ENST00000504663 WFDC9Q8NEX5 89 aa7.72□□□□□ -1.17
TPM3-217ENST00000504663 OR8A1Q8NGG7 326 aa7.72□□□□□ -1.17
TPM3-217ENST00000504663 DYNLRB2Q8TF09 96 aa7.72□□□□□ -1.17
TPM3-217ENST00000504663 PRR25Q96S07 402 aa7.72□□□□□ -1.17
TPM3-217ENST00000504663 SPAG8Q99932 426 aaPredicted RBP7.72□□□□□ -1.17
TPM3-217ENST00000504663 C19orf73Q9NVV2 129 aa7.72□□□□□ -1.17
TPM3-217ENST00000504663 ZNF492Q9P255 531 aa7.72□□□□□ -1.17
TPM3-217ENST00000504663 A0A0J9YX75 114 aa7.71□□□□□ -1.18
TPM3-217ENST00000504663 RBMY1BA6NDE4 496 aaKnown RBP7.71□□□□□ -1.18
TPM3-217ENST00000504663 RBMY1EA6NEQ0 496 aaKnown RBP7.71□□□□□ -1.18
TPM3-217ENST00000504663 FBLL1A6NHQ2 334 aaKnown RBP7.71□□□□□ -1.18
TPM3-217ENST00000504663 B4DEV8 164 aa7.71□□□□□ -1.18
TPM3-217ENST00000504663 WIPF1O43516 503 aa7.71□□□□□ -1.18
TPM3-217ENST00000504663 SAP30O75446 220 aa7.71□□□□□ -1.18
TPM3-217ENST00000504663 RBMY1DP0C7P1 496 aaKnown RBP7.71□□□□□ -1.18
TPM3-217ENST00000504663 BEAN1Q3B7T3 259 aa7.71□□□□□ -1.18
TPM3-217ENST00000504663 PSMG4Q5JS54 123 aa7.71□□□□□ -1.18
TPM3-217ENST00000504663 AMTNQ6UX39 209 aa7.71□□□□□ -1.18
TPM3-217ENST00000504663 FAM231DQ6ZW35 169 aa7.71□□□□□ -1.18
TPM3-217ENST00000504663 ZFAND2AQ8N6M9 145 aa7.71□□□□□ -1.18
TPM3-217ENST00000504663 OR2K2Q8NGT1 345 aa7.71□□□□□ -1.18
TPM3-217ENST00000504663 SFRP2Q96HF1 295 aa7.71□□□□□ -1.18
TPM3-217ENST00000504663 RNASE7Q9H1E1 156 aaKnown RBP7.71□□□□□ -1.18
TPM3-217ENST00000504663 SAV1Q9H4B6 383 aaPredicted RBP7.71□□□□□ -1.18
TPM3-217ENST00000504663 RPS10P5Q9NQ39 176 aa7.71□□□□□ -1.18
TPM3-217ENST00000504663 V9GYV3 84 aa7.71□□□□□ -1.18
TPM3-217ENST00000504663 SORL1Q92673 2214 aa7.71□□□□□ -1.18
TPM3-217ENST00000504663 ID1P41134 155 aa7.7□□□□□ -1.18
TPM3-217ENST00000504663 ZNF138P52744 262 aa7.7□□□□□ -1.18
TPM3-217ENST00000504663 KIR3DS1Q14943 382 aa7.7□□□□□ -1.18
TPM3-217ENST00000504663 TMEM88Q6PEY1 159 aa7.7□□□□□ -1.18
TPM3-217ENST00000504663 OSTCQ9NRP0 149 aa7.7□□□□□ -1.18
TPM3-217ENST00000504663 ZFP30Q9Y2G7 519 aa7.7□□□□□ -1.18
TPM3-217ENST00000504663 K7EQM0 130 aa7.69□□□□□ -1.18
TPM3-217ENST00000504663 CRISP2P16562 243 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms