RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 OXA1LQ15070 435 aa10.09□□□□□ -0.79
HOXC9-202ENST00000504557 ACOT6Q3I5F7 207 aaPredicted RBP10.09□□□□□ -0.79
HOXC9-202ENST00000504557 TMEM78Q5T7P6 136 aa10.09□□□□□ -0.79
HOXC9-202ENST00000504557 Q8TAT8 98 aa10.09□□□□□ -0.79
HOXC9-202ENST00000504557 TMEM263Q8WUH6 116 aaKnown RBP10.09□□□□□ -0.79
HOXC9-202ENST00000504557 ZNF503Q96F45 646 aa10.09□□□□□ -0.79
HOXC9-202ENST00000504557 HYLS1Q96M11 299 aa10.09□□□□□ -0.79
HOXC9-202ENST00000504557 Q9H3A6 140 aa10.09□□□□□ -0.79
HOXC9-202ENST00000504557 NACAE9PAV3 2078 aa10.08□□□□□ -0.8
HOXC9-202ENST00000504557 FXYD6-FXYD2A0A087WZ82 144 aa10.08□□□□□ -0.8
HOXC9-202ENST00000504557 C7orf71A4D174 169 aa10.08□□□□□ -0.8
HOXC9-202ENST00000504557 GPX1P07203 203 aa10.08□□□□□ -0.8
HOXC9-202ENST00000504557 P0DMU3 169 aa10.08□□□□□ -0.8
HOXC9-202ENST00000504557 FAM231AP0DMU4 169 aa10.08□□□□□ -0.8
HOXC9-202ENST00000504557 FAM231CP0DMU5 169 aa10.08□□□□□ -0.8
HOXC9-202ENST00000504557 CSN1S1P47710 185 aa10.08□□□□□ -0.8
HOXC9-202ENST00000504557 RGS21Q2M5E4 152 aa10.08□□□□□ -0.8
HOXC9-202ENST00000504557 RNASE8Q8TDE3 154 aaKnown RBP10.08□□□□□ -0.8
HOXC9-202ENST00000504557 LINC00477Q96M19 166 aa10.08□□□□□ -0.8
HOXC9-202ENST00000504557 ODF3Q96PU9 254 aa10.08□□□□□ -0.8
HOXC9-202ENST00000504557 C20orf144Q9BQM9 153 aa10.08□□□□□ -0.8
HOXC9-202ENST00000504557 SNURFLB1AK76 121 aa10.07□□□□□ -0.8
HOXC9-202ENST00000504557 M0R2N4 97 aa10.07□□□□□ -0.8
HOXC9-202ENST00000504557 SLC25A5P05141 298 aaKnown RBP10.07□□□□□ -0.8
HOXC9-202ENST00000504557 M6PRP20645 277 aa10.07□□□□□ -0.8
HOXC9-202ENST00000504557 ZNF493Q6ZR52 646 aa10.07□□□□□ -0.8
HOXC9-202ENST00000504557 OR10G4Q8NGN3 311 aa10.07□□□□□ -0.8
HOXC9-202ENST00000504557 OR10G9Q8NGN4 311 aa10.07□□□□□ -0.8
HOXC9-202ENST00000504557 OR10G7Q8NGN6 311 aa10.07□□□□□ -0.8
HOXC9-202ENST00000504557 VPS13DQ5THJ4 4388 aa10.06□□□□□ -0.8
HOXC9-202ENST00000504557 GAGE12BA1L429 117 aa10.06□□□□□ -0.8
HOXC9-202ENST00000504557 CBY3A6NI87 242 aa10.06□□□□□ -0.8
HOXC9-202ENST00000504557 GAGE7O76087 117 aa10.06□□□□□ -0.8
HOXC9-202ENST00000504557 NUDT3O95989 172 aa10.06□□□□□ -0.8
HOXC9-202ENST00000504557 ATP5G1P05496 136 aa10.06□□□□□ -0.8
HOXC9-202ENST00000504557 GIPP09681 153 aaPredicted RBP10.06□□□□□ -0.8
HOXC9-202ENST00000504557 GAGE12FP0CL80 117 aa10.06□□□□□ -0.8
HOXC9-202ENST00000504557 GAGE12GP0CL81 117 aa10.06□□□□□ -0.8
HOXC9-202ENST00000504557 GAGE12IP0CL82 117 aa10.06□□□□□ -0.8
HOXC9-202ENST00000504557 ATP5G3P48201 142 aa10.06□□□□□ -0.8
HOXC9-202ENST00000504557 Q6ZQT7 251 aa10.06□□□□□ -0.8
HOXC9-202ENST00000504557 C9orf47Q6ZRZ4 202 aa10.06□□□□□ -0.8
HOXC9-202ENST00000504557 POM121L12Q8N7R1 296 aa10.06□□□□□ -0.8
HOXC9-202ENST00000504557 IGLV2-18A0A075B6J9 118 aa10.05□□□□□ -0.8
HOXC9-202ENST00000504557 RGS13O14921 159 aa10.05□□□□□ -0.8
HOXC9-202ENST00000504557 OR5I1Q13606 314 aa10.05□□□□□ -0.8
HOXC9-202ENST00000504557 ZNF266Q14584 549 aa10.05□□□□□ -0.8
HOXC9-202ENST00000504557 PRR9Q5T870 116 aa10.05□□□□□ -0.8
HOXC9-202ENST00000504557 INO80EQ8NBZ0 244 aaPredicted RBP10.05□□□□□ -0.8
HOXC9-202ENST00000504557 FAM210BQ96KR6 192 aa10.05□□□□□ -0.8
HOXC9-202ENST00000504557 AQP10Q96PS8 301 aa10.05□□□□□ -0.8
HOXC9-202ENST00000504557 PYGO2Q9BRQ0 406 aa10.05□□□□□ -0.8
HOXC9-202ENST00000504557 GSN-AS1Q9NRJ2 163 aa10.05□□□□□ -0.8
HOXC9-202ENST00000504557 PGPA6NDG6 321 aa10.04□□□□□ -0.8
HOXC9-202ENST00000504557 KLLNB2CW77 178 aa10.04□□□□□ -0.8
HOXC9-202ENST00000504557 ATP6V0CP27449 155 aa10.04□□□□□ -0.8
HOXC9-202ENST00000504557 CDC34P49427 236 aaPredicted RBP10.04□□□□□ -0.8
HOXC9-202ENST00000504557 ZNF138P52744 262 aa10.04□□□□□ -0.8
HOXC9-202ENST00000504557 OR2T35Q8NGX2 323 aa10.04□□□□□ -0.8
HOXC9-202ENST00000504557 CMTM2Q8TAZ6 248 aa10.04□□□□□ -0.8
HOXC9-202ENST00000504557 FAM19A4Q96LR4 140 aa10.04□□□□□ -0.8
HOXC9-202ENST00000504557 SH3BGRL3Q9H299 93 aa10.04□□□□□ -0.8
HOXC9-202ENST00000504557 ZNF492Q9P255 531 aa10.04□□□□□ -0.8
HOXC9-202ENST00000504557 DNAH6Q9C0G6 4158 aa10.04□□□□□ -0.8
HOXC9-202ENST00000504557 ARL14EPLP0DKL9 152 aa10.03□□□□□ -0.8
HOXC9-202ENST00000504557 MUC21Q5SSG8 566 aa10.03□□□□□ -0.8
HOXC9-202ENST00000504557 PQLC2Q6ZP29 291 aa10.03□□□□□ -0.8
HOXC9-202ENST00000504557 Q6ZTI0 123 aa10.03□□□□□ -0.8
HOXC9-202ENST00000504557 IQCF2Q8IXL9 164 aa10.03□□□□□ -0.8
HOXC9-202ENST00000504557 ZFAND2AQ8N6M9 145 aa10.03□□□□□ -0.8
HOXC9-202ENST00000504557 ATG101Q9BSB4 218 aa10.03□□□□□ -0.8
HOXC9-202ENST00000504557 TP53TG3Q9ULZ0 132 aa10.03□□□□□ -0.8
HOXC9-202ENST00000504557 A0A0J9YY99 117 aa10.02□□□□□ -0.81
HOXC9-202ENST00000504557 DIRC3C9JPN6 131 aa10.02□□□□□ -0.81
HOXC9-202ENST00000504557 ZNF324O75467 553 aaPredicted RBP10.02□□□□□ -0.81
HOXC9-202ENST00000504557 CRISP2P16562 243 aa10.02□□□□□ -0.81
HOXC9-202ENST00000504557 GNG5P63218 68 aa10.02□□□□□ -0.81
HOXC9-202ENST00000504557 FAM74A1Q5RGS3 127 aa10.02□□□□□ -0.81
HOXC9-202ENST00000504557 RPL7L1Q6DKI1 246 aaKnown RBP10.02□□□□□ -0.81
HOXC9-202ENST00000504557 GOLT1AQ6ZVE7 132 aa10.02□□□□□ -0.81
HOXC9-202ENST00000504557 LYPD1Q8N2G4 141 aa10.02□□□□□ -0.81
HOXC9-202ENST00000504557 EIF4E3Q8N5X7 224 aaKnown RBP10.02□□□□□ -0.81
HOXC9-202ENST00000504557 C15orf53Q8NAA6 179 aa10.02□□□□□ -0.81
HOXC9-202ENST00000504557 ARPC5LQ9BPX5 153 aa10.02□□□□□ -0.81
HOXC9-202ENST00000504557 OTORQ9NRC9 128 aa10.02□□□□□ -0.81
HOXC9-202ENST00000504557 TRGV2A0A075B6R0 118 aa10.01□□□□□ -0.81
HOXC9-202ENST00000504557 TRGV1A0A0A0MS02 117 aa10.01□□□□□ -0.81
HOXC9-202ENST00000504557 BORCS7-ASMTA0A0B4J1R7 106 aa10.01□□□□□ -0.81
HOXC9-202ENST00000504557 RNF222A6NCQ9 220 aa10.01□□□□□ -0.81
HOXC9-202ENST00000504557 SMLR1H3BR10 107 aa10.01□□□□□ -0.81
HOXC9-202ENST00000504557 ZNF680Q8NEM1 530 aa10.01□□□□□ -0.81
HOXC9-202ENST00000504557 RXFP4Q8TDU9 374 aa10.01□□□□□ -0.81
HOXC9-202ENST00000504557 RAB24Q969Q5 203 aa10.01□□□□□ -0.81
HOXC9-202ENST00000504557 SGK494Q96LW2 274 aa10.01□□□□□ -0.81
HOXC9-202ENST00000504557 TMPRSS5Q9H3S3 457 aa10.01□□□□□ -0.81
HOXC9-202ENST00000504557 NAGKQ9UJ70 344 aa10.01□□□□□ -0.81
HOXC9-202ENST00000504557 TNFSF18Q9UNG2 199 aa10.01□□□□□ -0.81
HOXC9-202ENST00000504557 KLF12Q9Y4X4 402 aa10.01□□□□□ -0.81
HOXC9-202ENST00000504557 FRAS1Q86XX4 4008 aa10.01□□□□□ -0.81
HOXC9-202ENST00000504557 IGHV1OR15-1A0A075B7D0 117 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms