RNA–Protein interactions for RNA: ENST00000504101.1

POLR2J3-208, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-208ENST00000504101 ZNF253O75346 499 aa11.42□□□□□ -0.58
POLR2J3-208ENST00000504101 MPDU1O75352 247 aa11.42□□□□□ -0.58
POLR2J3-208ENST00000504101 OR4E1P0C645 316 aa11.42□□□□□ -0.58
POLR2J3-208ENST00000504101 RNASE4P34096 147 aaKnown RBP11.42□□□□□ -0.58
POLR2J3-208ENST00000504101 TMBIM6P55061 237 aa11.42□□□□□ -0.58
POLR2J3-208ENST00000504101 IBA57Q5T440 356 aaKnown RBP11.42□□□□□ -0.58
POLR2J3-208ENST00000504101 Q6ZRG5 221 aa11.42□□□□□ -0.58
POLR2J3-208ENST00000504101 WFDC10BQ8IUB3 73 aa11.42□□□□□ -0.58
POLR2J3-208ENST00000504101 DNAJC4Q9NNZ3 241 aa11.42□□□□□ -0.58
POLR2J3-208ENST00000504101 EVI2AP22794 236 aa11.41□□□□□ -0.58
POLR2J3-208ENST00000504101 FAM19A4Q96LR4 140 aa11.41□□□□□ -0.58
POLR2J3-208ENST00000504101 TMEM70Q9BUB7 260 aa11.41□□□□□ -0.58
POLR2J3-208ENST00000504101 TP53TG3Q9ULZ0 132 aa11.41□□□□□ -0.58
POLR2J3-208ENST00000504101 RCL1Q9Y2P8 373 aaKnown RBP11.41□□□□□ -0.58
POLR2J3-208ENST00000504101 V9GYH0 126 aa11.41□□□□□ -0.58
POLR2J3-208ENST00000504101 IGLV5-52A0A0A0MRZ9 124 aa11.4□□□□□ -0.58
POLR2J3-208ENST00000504101 RGS13O14921 159 aa11.4□□□□□ -0.58
POLR2J3-208ENST00000504101 SRIP30626 198 aa11.4□□□□□ -0.58
POLR2J3-208ENST00000504101 CAMLGP49069 296 aa11.4□□□□□ -0.58
POLR2J3-208ENST00000504101 FHL2Q14192 279 aa11.4□□□□□ -0.58
POLR2J3-208ENST00000504101 IAH1Q2TAA2 248 aaPredicted RBP11.4□□□□□ -0.58
POLR2J3-208ENST00000504101 OR1L4Q8NGR5 311 aa11.4□□□□□ -0.58
POLR2J3-208ENST00000504101 LINC00477Q96M19 166 aa11.4□□□□□ -0.58
POLR2J3-208ENST00000504101 TRBV19A0A075B6N1 114 aa11.39□□□□□ -0.59
POLR2J3-208ENST00000504101 E5RGE8 158 aa11.39□□□□□ -0.59
POLR2J3-208ENST00000504101 GPX1P07203 203 aa11.39□□□□□ -0.59
POLR2J3-208ENST00000504101 CRISP2P16562 243 aa11.39□□□□□ -0.59
POLR2J3-208ENST00000504101 RAB31Q13636 194 aa11.39□□□□□ -0.59
POLR2J3-208ENST00000504101 MIC13Q5XKP0 118 aa11.39□□□□□ -0.59
POLR2J3-208ENST00000504101 NRARPQ7Z6K4 114 aa11.39□□□□□ -0.59
POLR2J3-208ENST00000504101 PFDN5Q99471 154 aa11.39□□□□□ -0.59
POLR2J3-208ENST00000504101 ARPC5LQ9BPX5 153 aa11.39□□□□□ -0.59
POLR2J3-208ENST00000504101 AGPAT4-IT1Q9H0P7 198 aa11.39□□□□□ -0.59
POLR2J3-208ENST00000504101 TRGV4A0A0C4DH28 118 aa11.38□□□□□ -0.59
POLR2J3-208ENST00000504101 C7orf66A4D0T2 115 aa11.38□□□□□ -0.59
POLR2J3-208ENST00000504101 K7EQD1 137 aa11.38□□□□□ -0.59
POLR2J3-208ENST00000504101 NOL3O60936 208 aaKnown RBP11.38□□□□□ -0.59
POLR2J3-208ENST00000504101 PCNPQ8WW12 178 aaKnown RBP11.38□□□□□ -0.59
POLR2J3-208ENST00000504101 MRPL32Q9BYC8 188 aaKnown RBP11.38□□□□□ -0.59
POLR2J3-208ENST00000504101 GSKIPQ9P0R6 139 aa11.38□□□□□ -0.59
POLR2J3-208ENST00000504101 PRELID1Q9Y255 219 aa11.38□□□□□ -0.59
POLR2J3-208ENST00000504101 DNAH8Q96JB1 4490 aa11.37□□□□□ -0.59
POLR2J3-208ENST00000504101 IGHV1OR15-1A0A075B7D0 117 aa11.37□□□□□ -0.59
POLR2J3-208ENST00000504101 H3BMQ9 156 aa11.37□□□□□ -0.59
POLR2J3-208ENST00000504101 PSCAO43653 123 aa11.37□□□□□ -0.59
POLR2J3-208ENST00000504101 CRYGDP07320 174 aa11.37□□□□□ -0.59
POLR2J3-208ENST00000504101 NMBP08949 121 aa11.37□□□□□ -0.59
POLR2J3-208ENST00000504101 ZNF415Q09FC8 603 aa11.37□□□□□ -0.59
POLR2J3-208ENST00000504101 PRR9Q5T870 116 aa11.37□□□□□ -0.59
POLR2J3-208ENST00000504101 C10orf126Q8N4M7 172 aa11.37□□□□□ -0.59
POLR2J3-208ENST00000504101 NTN5Q8WTR8 489 aaPredicted RBP11.37□□□□□ -0.59
POLR2J3-208ENST00000504101 FLVCR2Q9UPI3 526 aa11.37□□□□□ -0.59
POLR2J3-208ENST00000504101 TIMM9Q9Y5J7 89 aa11.37□□□□□ -0.59
POLR2J3-208ENST00000504101 NDUFB6O95139 128 aa11.36□□□□□ -0.59
POLR2J3-208ENST00000504101 NDUFB4O95168 129 aa11.36□□□□□ -0.59
POLR2J3-208ENST00000504101 MBPP02686 304 aaPredicted RBP11.36□□□□□ -0.59
POLR2J3-208ENST00000504101 PDE6HQ13956 83 aa11.36□□□□□ -0.59
POLR2J3-208ENST00000504101 Q6ZQT7 251 aa11.36□□□□□ -0.59
POLR2J3-208ENST00000504101 C9orf47Q6ZRZ4 202 aa11.36□□□□□ -0.59
POLR2J3-208ENST00000504101 ZFAND2AQ8N6M9 145 aa11.36□□□□□ -0.59
POLR2J3-208ENST00000504101 IGKV2-40A0A087WW87 121 aaPredicted RBP11.35□□□□□ -0.59
POLR2J3-208ENST00000504101 L7N2F9 121 aa11.35□□□□□ -0.59
POLR2J3-208ENST00000504101 IGKV2D-40P01614 121 aaPredicted RBP11.35□□□□□ -0.59
POLR2J3-208ENST00000504101 SFTA3P0C7M3 94 aa11.35□□□□□ -0.59
POLR2J3-208ENST00000504101 HIST1H1EP10412 219 aaKnown RBP11.35□□□□□ -0.59
POLR2J3-208ENST00000504101 GYPEP15421 78 aa11.35□□□□□ -0.59
POLR2J3-208ENST00000504101 VAMP2P63027 116 aa11.35□□□□□ -0.59
POLR2J3-208ENST00000504101 TMEM78Q5T7P6 136 aa11.35□□□□□ -0.59
POLR2J3-208ENST00000504101 EXOC3-AS1Q8N2X6 119 aa11.35□□□□□ -0.59
POLR2J3-208ENST00000504101 C12orf45Q8N5I9 185 aaPredicted RBP11.35□□□□□ -0.59
POLR2J3-208ENST00000504101 SRRQ9GZT4 340 aa11.35□□□□□ -0.59
POLR2J3-208ENST00000504101 TMEM14CQ9P0S9 112 aa11.35□□□□□ -0.59
POLR2J3-208ENST00000504101 WDR83OSQ9Y284 106 aa11.35□□□□□ -0.59
POLR2J3-208ENST00000504101 LRCOL1A6NCL2 159 aa11.34□□□□□ -0.59
POLR2J3-208ENST00000504101 ORM1P02763 201 aa11.34□□□□□ -0.59
POLR2J3-208ENST00000504101 PYYP10082 97 aa11.34□□□□□ -0.59
POLR2J3-208ENST00000504101 BCAP31P51572 246 aa11.34□□□□□ -0.59
POLR2J3-208ENST00000504101 BLNKQ8WV28 456 aa11.34□□□□□ -0.59
POLR2J3-208ENST00000504101 ZNF479Q96JC4 524 aa11.34□□□□□ -0.59
POLR2J3-208ENST00000504101 TXNDC17Q9BRA2 123 aa11.34□□□□□ -0.59
POLR2J3-208ENST00000504101 AAMDCQ9H7C9 122 aa11.34□□□□□ -0.59
POLR2J3-208ENST00000504101 SLC39A9Q9NUM3 307 aa11.34□□□□□ -0.59
POLR2J3-208ENST00000504101 UQCC1Q9NVA1 299 aa11.34□□□□□ -0.59
POLR2J3-208ENST00000504101 NAP1L6A6NFF2 107 aa11.33□□□□□ -0.6
POLR2J3-208ENST00000504101 CST7O76096 145 aa11.33□□□□□ -0.6
POLR2J3-208ENST00000504101 RPL29P47914 159 aaKnown RBP11.33□□□□□ -0.6
POLR2J3-208ENST00000504101 IQCF2Q8IXL9 164 aa11.33□□□□□ -0.6
POLR2J3-208ENST00000504101 UBE2L5PA0A1B0GUS4 154 aa11.32□□□□□ -0.6
POLR2J3-208ENST00000504101 S100A5P33763 92 aa11.32□□□□□ -0.6
POLR2J3-208ENST00000504101 INPP1P49441 399 aa11.32□□□□□ -0.6
POLR2J3-208ENST00000504101 CAV2P51636 162 aa11.32□□□□□ -0.6
POLR2J3-208ENST00000504101 BAXQ07812 192 aa11.32□□□□□ -0.6
POLR2J3-208ENST00000504101 FAM122CQ6P4D5 195 aa11.32□□□□□ -0.6
POLR2J3-208ENST00000504101 Q8N814 137 aa11.32□□□□□ -0.6
POLR2J3-208ENST00000504101 OR10G4Q8NGN3 311 aa11.32□□□□□ -0.6
POLR2J3-208ENST00000504101 C20orf85Q9H1P6 137 aa11.32□□□□□ -0.6
POLR2J3-208ENST00000504101 FAM30AQ9NZY2 134 aa11.32□□□□□ -0.6
POLR2J3-208ENST00000504101 ZNF492Q9P255 531 aa11.32□□□□□ -0.6
POLR2J3-208ENST00000504101 HMCN2Q8NDA2 5059 aa11.31□□□□□ -0.6
POLR2J3-208ENST00000504101 KRTAP29-1A8MX34 341 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms