RNA–Protein interactions for RNA: ENST00000503057.5

LIMCH1-205, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-205ENST00000503057 DAZAP2Q15038 168 aaPredicted RBP8.48□□□□□ -1.05
LIMCH1-205ENST00000503057 MEIG1Q5JSS6 88 aa8.48□□□□□ -1.05
LIMCH1-205ENST00000503057 Q8NA96 180 aa8.48□□□□□ -1.05
LIMCH1-205ENST00000503057 IGFBPL1Q8WX77 278 aa8.48□□□□□ -1.05
LIMCH1-205ENST00000503057 KIR2DL5BA0A0G2JN68 375 aa8.48□□□□□ -1.05
LIMCH1-205ENST00000503057 KIR2DL5BA0A0G2JPC4 375 aa8.48□□□□□ -1.05
LIMCH1-205ENST00000503057 KIR2DL5AQ8N109 375 aa8.48□□□□□ -1.05
LIMCH1-205ENST00000503057 MRPL53Q96EL3 112 aaKnown RBP8.48□□□□□ -1.05
LIMCH1-205ENST00000503057 VGLL1Q99990 258 aa8.48□□□□□ -1.05
LIMCH1-205ENST00000503057 MCRIP2Q9BUT9 160 aaKnown RBP8.48□□□□□ -1.05
LIMCH1-205ENST00000503057 CSTL1Q9H114 145 aa8.48□□□□□ -1.05
LIMCH1-205ENST00000503057 KLF12Q9Y4X4 402 aa8.48□□□□□ -1.05
LIMCH1-205ENST00000503057 GVINP1Q7Z2Y8 2422 aa8.48□□□□□ -1.05
LIMCH1-205ENST00000503057 E7EUB6 86 aa8.48□□□□□ -1.05
LIMCH1-205ENST00000503057 IGKV1-17P01599 117 aa8.48□□□□□ -1.05
LIMCH1-205ENST00000503057 CD5LO43866 347 aa8.47□□□□□ -1.05
LIMCH1-205ENST00000503057 ARL6IP6Q8N6S5 226 aa8.47□□□□□ -1.05
LIMCH1-205ENST00000503057 SIGLEC8Q9NYZ4 499 aa8.47□□□□□ -1.05
LIMCH1-205ENST00000503057 A0A1W2PRX2 142 aa8.47□□□□□ -1.05
LIMCH1-205ENST00000503057 CRXO43186 299 aaPredicted RBP8.47□□□□□ -1.05
LIMCH1-205ENST00000503057 HOXA3O43365 443 aaPredicted RBP8.47□□□□□ -1.05
LIMCH1-205ENST00000503057 ADORA2A-AS1P86434 159 aa8.47□□□□□ -1.05
LIMCH1-205ENST00000503057 LGALS9BQ3B8N2 356 aa8.47□□□□□ -1.05
LIMCH1-205ENST00000503057 SAMD5Q5TGI4 173 aa8.47□□□□□ -1.05
LIMCH1-205ENST00000503057 LGALS9CQ6DKI2 356 aa8.47□□□□□ -1.05
LIMCH1-205ENST00000503057 INTS1Q8N201 2190 aaKnown RBP8.47□□□□□ -1.05
LIMCH1-205ENST00000503057 UBE2V1Q13404 147 aa8.47□□□□□ -1.05
LIMCH1-205ENST00000503057 SELENOKQ9Y6D0 94 aa8.47□□□□□ -1.05
LIMCH1-205ENST00000503057 COX11Q9Y6N1 276 aa8.47□□□□□ -1.05
LIMCH1-205ENST00000503057 APOMO95445 188 aa8.47□□□□□ -1.05
LIMCH1-205ENST00000503057 CRYGCP07315 174 aa8.47□□□□□ -1.05
LIMCH1-205ENST00000503057 PCP4P48539 62 aa8.47□□□□□ -1.05
LIMCH1-205ENST00000503057 BCL6BQ8N143 479 aaPredicted RBP8.47□□□□□ -1.05
LIMCH1-205ENST00000503057 JMJD8Q96S16 334 aa8.47□□□□□ -1.05
LIMCH1-205ENST00000503057 WI2-2373I1.2A0A1W2PRP0 233 aa8.46□□□□□ -1.05
LIMCH1-205ENST00000503057 CD28P10747 220 aa8.46□□□□□ -1.05
LIMCH1-205ENST00000503057 IGLL1P15814 213 aa8.46□□□□□ -1.05
LIMCH1-205ENST00000503057 ZNF418Q8TF45 676 aaPredicted RBP8.46□□□□□ -1.05
LIMCH1-205ENST00000503057 YPEL4Q96NS1 127 aa8.46□□□□□ -1.05
LIMCH1-205ENST00000503057 YAE1D1Q9NRH1 226 aa8.46□□□□□ -1.05
LIMCH1-205ENST00000503057 IGHV7-81A0A0B4J1V7 117 aa8.46□□□□□ -1.06
LIMCH1-205ENST00000503057 CMC4P56277 68 aaPredicted RBP8.46□□□□□ -1.06
LIMCH1-205ENST00000503057 C1orf229Q6ZS94 237 aaPredicted RBP8.46□□□□□ -1.06
LIMCH1-205ENST00000503057 PKDREJQ9NTG1 2253 aa8.46□□□□□ -1.06
LIMCH1-205ENST00000503057 J3QLI3 93 aa8.46□□□□□ -1.06
LIMCH1-205ENST00000503057 ZC2HC1BQ5TFG8 222 aa8.46□□□□□ -1.06
LIMCH1-205ENST00000503057 CADP27708 2225 aa8.46□□□□□ -1.06
LIMCH1-205ENST00000503057 NUPR1O60356 82 aa8.45□□□□□ -1.06
LIMCH1-205ENST00000503057 ZNF415Q09FC8 603 aa8.45□□□□□ -1.06
LIMCH1-205ENST00000503057 CD300EQ496F6 205 aaPredicted RBP8.45□□□□□ -1.06
LIMCH1-205ENST00000503057 PRSS57Q6UWY2 283 aa8.45□□□□□ -1.06
LIMCH1-205ENST00000503057 APC2O95996 2303 aa8.45□□□□□ -1.06
LIMCH1-205ENST00000503057 CENPVL3A0A0U1RRI6 287 aa8.45□□□□□ -1.06
LIMCH1-205ENST00000503057 A0A1B0GWB2 263 aa8.45□□□□□ -1.06
LIMCH1-205ENST00000503057 ZNF503Q96F45 646 aa8.45□□□□□ -1.06
LIMCH1-205ENST00000503057 ROS1P08922 2347 aa8.45□□□□□ -1.06
LIMCH1-205ENST00000503057 TRBV6-1A0A0K0K1D8 114 aa8.45□□□□□ -1.06
LIMCH1-205ENST00000503057 ZNF479Q96JC4 524 aa8.45□□□□□ -1.06
LIMCH1-205ENST00000503057 NPYP01303 97 aa8.45□□□□□ -1.06
LIMCH1-205ENST00000503057 UTF1Q5T230 341 aa8.45□□□□□ -1.06
LIMCH1-205ENST00000503057 MRPL36Q9P0J6 103 aaKnown RBP8.45□□□□□ -1.06
LIMCH1-205ENST00000503057 ESDP10768 282 aa8.44□□□□□ -1.06
LIMCH1-205ENST00000503057 STPG4Q8N801 248 aa8.44□□□□□ -1.06
LIMCH1-205ENST00000503057 DYSFO75923 2080 aa8.44□□□□□ -1.06
LIMCH1-205ENST00000503057 MED12LQ86YW9 2145 aa8.44□□□□□ -1.06
LIMCH1-205ENST00000503057 IGKV1D-37A0A075B6S9 117 aa8.44□□□□□ -1.06
LIMCH1-205ENST00000503057 NDUFS7O75251 213 aa8.44□□□□□ -1.06
LIMCH1-205ENST00000503057 COX8AP10176 69 aa8.44□□□□□ -1.06
LIMCH1-205ENST00000503057 DYNAPQ8N1N2 210 aa8.44□□□□□ -1.06
LIMCH1-205ENST00000503057 MTURNQ8N3F0 131 aa8.44□□□□□ -1.06
LIMCH1-205ENST00000503057 Q8N7P7 452 aa8.44□□□□□ -1.06
LIMCH1-205ENST00000503057 FSTL3O95633 263 aa8.44□□□□□ -1.06
LIMCH1-205ENST00000503057 EGR2P11161 476 aaPredicted RBP8.44□□□□□ -1.06
LIMCH1-205ENST00000503057 DTX2Q86UW9 622 aa8.44□□□□□ -1.06
LIMCH1-205ENST00000503057 TRGV2A0A075B6R0 118 aa8.44□□□□□ -1.06
LIMCH1-205ENST00000503057 KIR3DS1Q14943 382 aa8.44□□□□□ -1.06
LIMCH1-205ENST00000503057 ZNF48Q96MX3 618 aaPredicted RBP8.44□□□□□ -1.06
LIMCH1-205ENST00000503057 CHAC1Q9BUX1 264 aa8.44□□□□□ -1.06
LIMCH1-205ENST00000503057 TNRC6AQ8NDV7 1962 aaKnown RBP8.44□□□□□ -1.06
LIMCH1-205ENST00000503057 IGHV7-4-1A0A0J9YVY3 117 aa8.43□□□□□ -1.06
LIMCH1-205ENST00000503057 SYNJ2BPP57105 145 aa8.43□□□□□ -1.06
LIMCH1-205ENST00000503057 RIF1Q5UIP0 2472 aaKnown RBP8.43□□□□□ -1.06
LIMCH1-205ENST00000503057 CTSGP08311 255 aa8.43□□□□□ -1.06
LIMCH1-205ENST00000503057 BEX4Q9NWD9 120 aaPredicted RBP8.43□□□□□ -1.06
LIMCH1-205ENST00000503057 LENEPQ9Y5L5 61 aa8.43□□□□□ -1.06
LIMCH1-205ENST00000503057 ZNF876PQ49A33 203 aa8.43□□□□□ -1.06
LIMCH1-205ENST00000503057 TRPT1Q86TN4 253 aaKnown RBP8.43□□□□□ -1.06
LIMCH1-205ENST00000503057 A0A087WWL8 130 aa8.42□□□□□ -1.06
LIMCH1-205ENST00000503057 HLA-DMBP28068 263 aa8.42□□□□□ -1.06
LIMCH1-205ENST00000503057 ANXA2RQ3ZCQ2 193 aa8.42□□□□□ -1.06
LIMCH1-205ENST00000503057 Q8N9W7 124 aa8.42□□□□□ -1.06
LIMCH1-205ENST00000503057 C22orf34Q6ZV56 151 aa8.42□□□□□ -1.06
LIMCH1-205ENST00000503057 PLEKHB2Q96CS7 222 aa8.42□□□□□ -1.06
LIMCH1-205ENST00000503057 CACNA1HO95180 2353 aa8.42□□□□□ -1.06
LIMCH1-205ENST00000503057 INSP01308 110 aa8.42□□□□□ -1.06
LIMCH1-205ENST00000503057 GAGE1Q13065 139 aa8.42□□□□□ -1.06
LIMCH1-205ENST00000503057 SP5Q6BEB4 398 aaPredicted RBP8.42□□□□□ -1.06
LIMCH1-205ENST00000503057 GTSF1Q8WW33 167 aa8.42□□□□□ -1.06
LIMCH1-205ENST00000503057 IGKV3OR2-268A0A0C4DH90 116 aa8.42□□□□□ -1.06
LIMCH1-205ENST00000503057 TMEM141Q96I45 108 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms