RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 FAM106AQ4KMX7 169 aa13.85□□□□□ -0.19
LINC00535-201ENST00000501400 PDZD11Q5EBL8 140 aa13.85□□□□□ -0.19
LINC00535-201ENST00000501400 GDF5OSQ5U4N7 250 aa13.85□□□□□ -0.19
LINC00535-201ENST00000501400 WDR73Q6P4I2 378 aa13.85□□□□□ -0.19
LINC00535-201ENST00000501400 LINC00518Q8N0U6 118 aa13.85□□□□□ -0.19
LINC00535-201ENST00000501400 SMPXQ9UHP9 88 aa13.85□□□□□ -0.19
LINC00535-201ENST00000501400 IGHV4OR15-8A0A075B7B6 117 aa13.84□□□□□ -0.19
LINC00535-201ENST00000501400 A0A087WW49 117 aa13.84□□□□□ -0.19
LINC00535-201ENST00000501400 MT-ND6P03923 174 aa13.84□□□□□ -0.19
LINC00535-201ENST00000501400 SAPCD1Q5SSQ6 148 aa13.84□□□□□ -0.19
LINC00535-201ENST00000501400 C16orf92Q96LL3 132 aa13.84□□□□□ -0.19
LINC00535-201ENST00000501400 MTORP42345 2549 aa13.84□□□□□ -0.19
LINC00535-201ENST00000501400 TMEM213A2RRL7 107 aa13.84□□□□□ -0.19
LINC00535-201ENST00000501400 SH2D1AO60880 128 aa13.84□□□□□ -0.19
LINC00535-201ENST00000501400 CT45A10P0DMU9 189 aa13.84□□□□□ -0.19
LINC00535-201ENST00000501400 ZNF80P51504 273 aaPredicted RBP13.84□□□□□ -0.19
LINC00535-201ENST00000501400 COX19Q49B96 90 aa13.84□□□□□ -0.19
LINC00535-201ENST00000501400 RASL11AQ6T310 242 aa13.84□□□□□ -0.19
LINC00535-201ENST00000501400 Q6ZSV7 163 aa13.84□□□□□ -0.19
LINC00535-201ENST00000501400 KLHDC1Q8N7A1 406 aa13.84□□□□□ -0.19
LINC00535-201ENST00000501400 SELENOKQ9Y6D0 94 aa13.84□□□□□ -0.19
LINC00535-201ENST00000501400 A0A1B0GUS0 222 aa13.83□□□□□ -0.2
LINC00535-201ENST00000501400 FAM231BA6NCW3 169 aa13.83□□□□□ -0.2
LINC00535-201ENST00000501400 C18orf65Q6ZTR6 163 aa13.83□□□□□ -0.2
LINC00535-201ENST00000501400 ATP5L2Q7Z4Y8 100 aa13.83□□□□□ -0.2
LINC00535-201ENST00000501400 NRN1Q9NPD7 142 aa13.83□□□□□ -0.2
LINC00535-201ENST00000501400 NF1P21359 2839 aa13.83□□□□□ -0.2
LINC00535-201ENST00000501400 HLA-DQA1P01909 254 aa13.82□□□□□ -0.2
LINC00535-201ENST00000501400 TCTEX1D4Q5JR98 221 aa13.82□□□□□ -0.2
LINC00535-201ENST00000501400 RBPMS2Q6ZRY4 209 aaKnown RBP13.82□□□□□ -0.2
LINC00535-201ENST00000501400 PGLYRP4Q96LB8 373 aa13.82□□□□□ -0.2
LINC00535-201ENST00000501400 AGPAT4-IT1Q9H0P7 198 aa13.82□□□□□ -0.2
LINC00535-201ENST00000501400 UFC1Q9Y3C8 167 aa13.82□□□□□ -0.2
LINC00535-201ENST00000501400 OTOGQ6ZRI0 2925 aa13.82□□□□□ -0.2
LINC00535-201ENST00000501400 A8MWP6 167 aa13.82□□□□□ -0.2
LINC00535-201ENST00000501400 S100A8P05109 93 aa13.82□□□□□ -0.2
LINC00535-201ENST00000501400 FAM162BQ5T6X4 162 aa13.82□□□□□ -0.2
LINC00535-201ENST00000501400 CLEC5AQ9NY25 188 aa13.82□□□□□ -0.2
LINC00535-201ENST00000501400 GRIFINA4D1Z8 144 aa13.81□□□□□ -0.2
LINC00535-201ENST00000501400 FOXA3P55318 350 aaPredicted RBP13.81□□□□□ -0.2
LINC00535-201ENST00000501400 RAB4BP61018 213 aa13.81□□□□□ -0.2
LINC00535-201ENST00000501400 SLAQ13239 276 aa13.81□□□□□ -0.2
LINC00535-201ENST00000501400 REC114Q7Z4M0 266 aa13.81□□□□□ -0.2
LINC00535-201ENST00000501400 HOXD3P31249 432 aaPredicted RBP13.8□□□□□ -0.2
LINC00535-201ENST00000501400 C9orf47Q6ZRZ4 202 aa13.8□□□□□ -0.2
LINC00535-201ENST00000501400 TP53TG3Q9ULZ0 132 aa13.8□□□□□ -0.2
LINC00535-201ENST00000501400 SYNJ2BPP57105 145 aa13.8□□□□□ -0.2
LINC00535-201ENST00000501400 SMR3AQ99954 134 aa13.8□□□□□ -0.2
LINC00535-201ENST00000501400 NDFIP1Q9BT67 221 aa13.8□□□□□ -0.2
LINC00535-201ENST00000501400 IGKV3-7A0A075B6H7 116 aa13.79□□□□□ -0.2
LINC00535-201ENST00000501400 RPL11P62913 178 aaKnown RBP13.79□□□□□ -0.2
LINC00535-201ENST00000501400 HBBP68871 147 aa13.79□□□□□ -0.2
LINC00535-201ENST00000501400 KIAA1644Q3SXP7 199 aa13.79□□□□□ -0.2
LINC00535-201ENST00000501400 ZNF738Q8NE65 137 aa13.79□□□□□ -0.2
LINC00535-201ENST00000501400 HIST1H2BLQ99880 126 aa13.79□□□□□ -0.2
LINC00535-201ENST00000501400 NOTCH2Q04721 2471 aa13.78□□□□□ -0.2
LINC00535-201ENST00000501400 LGALS9O00182 355 aa13.78□□□□□ -0.2
LINC00535-201ENST00000501400 ZNF705DP0CH99 300 aaPredicted RBP13.78□□□□□ -0.2
LINC00535-201ENST00000501400 ZNF705BP0CI00 300 aaPredicted RBP13.78□□□□□ -0.2
LINC00535-201ENST00000501400 CAMPP49913 170 aa13.78□□□□□ -0.2
LINC00535-201ENST00000501400 ZNF138P52744 262 aa13.78□□□□□ -0.2
LINC00535-201ENST00000501400 LINC00310P59036 64 aa13.78□□□□□ -0.2
LINC00535-201ENST00000501400 DEFB1P60022 68 aa13.78□□□□□ -0.2
LINC00535-201ENST00000501400 DEFB136Q30KP8 78 aa13.78□□□□□ -0.2
LINC00535-201ENST00000501400 ZNF575Q86XF7 245 aa13.78□□□□□ -0.2
LINC00535-201ENST00000501400 SRD5A1P18405 259 aa13.78□□□□□ -0.2
LINC00535-201ENST00000501400 TMEM78Q5T7P6 136 aa13.78□□□□□ -0.2
LINC00535-201ENST00000501400 TMEM256Q8N2U0 113 aa13.78□□□□□ -0.2
LINC00535-201ENST00000501400 SSBP4Q9BWG4 385 aaPredicted RBP13.78□□□□□ -0.2
LINC00535-201ENST00000501400 APCSP02743 223 aa13.77□□□□□ -0.21
LINC00535-201ENST00000501400 FABP4P15090 132 aa13.77□□□□□ -0.21
LINC00535-201ENST00000501400 CRISP2P16562 243 aa13.77□□□□□ -0.21
LINC00535-201ENST00000501400 PRR31Q5SQ13 230 aa13.77□□□□□ -0.21
LINC00535-201ENST00000501400 DCANP1Q8TF63 244 aa13.77□□□□□ -0.21
LINC00535-201ENST00000501400 C12orf57Q99622 126 aa13.77□□□□□ -0.21
LINC00535-201ENST00000501400 PPP1R14DQ9NXH3 145 aa13.77□□□□□ -0.21
LINC00535-201ENST00000501400 TMSB15BA0A087X1C1 80 aa13.76□□□□□ -0.21
LINC00535-201ENST00000501400 TMEM189A5PLL7 270 aa13.76□□□□□ -0.21
LINC00535-201ENST00000501400 F2Z2F3 143 aa13.76□□□□□ -0.21
LINC00535-201ENST00000501400 AMBPP02760 352 aa13.76□□□□□ -0.21
LINC00535-201ENST00000501400 SMIM6P0DI80 62 aa13.76□□□□□ -0.21
LINC00535-201ENST00000501400 HIST2H2BDQ6DRA6 164 aa13.76□□□□□ -0.21
LINC00535-201ENST00000501400 TMEM160Q9NX00 188 aa13.76□□□□□ -0.21
LINC00535-201ENST00000501400 NUPR1O60356 82 aa13.76□□□□□ -0.21
LINC00535-201ENST00000501400 ARMS2P0C7Q2 107 aa13.76□□□□□ -0.21
LINC00535-201ENST00000501400 S100A2P29034 98 aa13.76□□□□□ -0.21
LINC00535-201ENST00000501400 BMI1P35226 326 aa13.76□□□□□ -0.21
LINC00535-201ENST00000501400 OR10D4PQ8NGN7 298 aa13.76□□□□□ -0.21
LINC00535-201ENST00000501400 C4orf3Q8WVX3 66 aa13.76□□□□□ -0.21
LINC00535-201ENST00000501400 HAX1O00165 279 aa13.75□□□□□ -0.21
LINC00535-201ENST00000501400 RNASE1P07998 156 aaKnown RBP13.75□□□□□ -0.21
LINC00535-201ENST00000501400 SLURP1P55000 103 aa13.75□□□□□ -0.21
LINC00535-201ENST00000501400 KLF5Q13887 457 aaPredicted RBP13.75□□□□□ -0.21
LINC00535-201ENST00000501400 SRIP30626 198 aa13.74□□□□□ -0.21
LINC00535-201ENST00000501400 Q0VG73 95 aa13.74□□□□□ -0.21
LINC00535-201ENST00000501400 ADAMTSL5Q6ZMM2 481 aa13.74□□□□□ -0.21
LINC00535-201ENST00000501400 A0A1B0GUT8 65 aa13.74□□□□□ -0.21
LINC00535-201ENST00000501400 C2orf70A6NJV1 201 aa13.74□□□□□ -0.21
LINC00535-201ENST00000501400 F6UB75 175 aa13.74□□□□□ -0.21
LINC00535-201ENST00000501400 OVOL1O14753 267 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms