RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 TRAV8-1A0A0A6YYK1 113 aa14.39□□□□□ -0.11
LINC01550-201ENST00000499006 RBMY1BA6NDE4 496 aaKnown RBP14.39□□□□□ -0.11
LINC01550-201ENST00000499006 RBMY1EA6NEQ0 496 aaKnown RBP14.39□□□□□ -0.11
LINC01550-201ENST00000499006 K7EQM0 130 aa14.39□□□□□ -0.11
LINC01550-201ENST00000499006 RBMY1DP0C7P1 496 aaKnown RBP14.39□□□□□ -0.11
LINC01550-201ENST00000499006 TMEM75Q8N9X5 138 aa14.39□□□□□ -0.11
LINC01550-201ENST00000499006 LINC00477Q96M19 166 aa14.39□□□□□ -0.11
LINC01550-201ENST00000499006 SMDT1Q9H4I9 107 aa14.39□□□□□ -0.11
LINC01550-201ENST00000499006 PPP1R14DQ9NXH3 145 aa14.39□□□□□ -0.11
LINC01550-201ENST00000499006 KLF12Q9Y4X4 402 aa14.39□□□□□ -0.11
LINC01550-201ENST00000499006 TMEM250H0YL14 139 aa14.38□□□□□ -0.11
LINC01550-201ENST00000499006 K7EIL1 84 aa14.38□□□□□ -0.11
LINC01550-201ENST00000499006 AMTNQ6UX39 209 aa14.38□□□□□ -0.11
LINC01550-201ENST00000499006 OR4B1Q8NGF8 309 aa14.38□□□□□ -0.11
LINC01550-201ENST00000499006 ZNF492Q9P255 531 aa14.38□□□□□ -0.11
LINC01550-201ENST00000499006 TRAV34A0A0B4J273 112 aa14.38□□□□□ -0.11
LINC01550-201ENST00000499006 C9JQL5 133 aa14.38□□□□□ -0.11
LINC01550-201ENST00000499006 SRP19P09132 144 aaKnown RBP14.38□□□□□ -0.11
LINC01550-201ENST00000499006 CT45A10P0DMU9 189 aa14.38□□□□□ -0.11
LINC01550-201ENST00000499006 PEA15Q15121 130 aa14.38□□□□□ -0.11
LINC01550-201ENST00000499006 TMEM78Q5T7P6 136 aa14.38□□□□□ -0.11
LINC01550-201ENST00000499006 SGK494Q96LW2 274 aa14.38□□□□□ -0.11
LINC01550-201ENST00000499006 IGKV3-20P01619 116 aa14.37□□□□□ -0.11
LINC01550-201ENST00000499006 AKR1C3P42330 323 aa14.37□□□□□ -0.11
LINC01550-201ENST00000499006 TMEM183BQ1AE95 376 aa14.37□□□□□ -0.11
LINC01550-201ENST00000499006 LINC00322Q6ZN03 302 aaPredicted RBP14.37□□□□□ -0.11
LINC01550-201ENST00000499006 FMC1Q96HJ9 113 aa14.37□□□□□ -0.11
LINC01550-201ENST00000499006 FAM19A4Q96LR4 140 aa14.37□□□□□ -0.11
LINC01550-201ENST00000499006 ODF3Q96PU9 254 aa14.37□□□□□ -0.11
LINC01550-201ENST00000499006 DERL1Q9BUN8 251 aa14.37□□□□□ -0.11
LINC01550-201ENST00000499006 TUBA4BQ9H853 241 aa14.37□□□□□ -0.11
LINC01550-201ENST00000499006 FBLL1A6NHQ2 334 aaKnown RBP14.36□□□□□ -0.11
LINC01550-201ENST00000499006 ZNF138P52744 262 aa14.36□□□□□ -0.11
LINC01550-201ENST00000499006 FLI1Q01543 452 aaPredicted RBP14.36□□□□□ -0.11
LINC01550-201ENST00000499006 Q8TAT8 98 aa14.36□□□□□ -0.11
LINC01550-201ENST00000499006 PSG8Q9UQ74 426 aa14.36□□□□□ -0.11
LINC01550-201ENST00000499006 TRBV6-1A0A0K0K1D8 114 aa14.35□□□□□ -0.11
LINC01550-201ENST00000499006 RPL35AP18077 110 aaKnown RBP14.35□□□□□ -0.11
LINC01550-201ENST00000499006 COMMD7Q86VX2 200 aa14.35□□□□□ -0.11
LINC01550-201ENST00000499006 TVP23CQ96ET8 276 aa14.35□□□□□ -0.11
LINC01550-201ENST00000499006 SLC35B3Q9H1N7 401 aa14.35□□□□□ -0.11
LINC01550-201ENST00000499006 LENEPQ9Y5L5 61 aa14.35□□□□□ -0.11
LINC01550-201ENST00000499006 LOC102724200A0A096LPH7 203 aaPredicted RBP14.34□□□□□ -0.11
LINC01550-201ENST00000499006 TRBV7-9A0A0J9YWB2 115 aa14.34□□□□□ -0.11
LINC01550-201ENST00000499006 S100A9P06702 114 aaKnown RBP14.34□□□□□ -0.11
LINC01550-201ENST00000499006 RPL35P42766 123 aaKnown RBP14.34□□□□□ -0.11
LINC01550-201ENST00000499006 EIF4E3Q8N5X7 224 aaKnown RBP14.34□□□□□ -0.11
LINC01550-201ENST00000499006 ASCL2Q99929 193 aa14.34□□□□□ -0.11
LINC01550-201ENST00000499006 LTAP01374 205 aa14.33□□□□□ -0.12
LINC01550-201ENST00000499006 CRISP2P16562 243 aa14.33□□□□□ -0.12
LINC01550-201ENST00000499006 UBE2G1P62253 170 aa14.33□□□□□ -0.12
LINC01550-201ENST00000499006 PRNTQ86SH4 94 aa14.33□□□□□ -0.12
LINC01550-201ENST00000499006 Q86TA4 180 aa14.33□□□□□ -0.12
LINC01550-201ENST00000499006 GIG44P09565 113 aaPredicted RBP14.32□□□□□ -0.12
LINC01550-201ENST00000499006 TAS2R60P59551 318 aa14.32□□□□□ -0.12
LINC01550-201ENST00000499006 MORN3Q6PF18 240 aaPredicted RBP14.32□□□□□ -0.12
LINC01550-201ENST00000499006 UQCC3Q6UW78 93 aa14.32□□□□□ -0.12
LINC01550-201ENST00000499006 PARLQ9H300 379 aa14.32□□□□□ -0.12
LINC01550-201ENST00000499006 M0R2Z0 102 aa14.31□□□□□ -0.12
LINC01550-201ENST00000499006 FRMD6-AS1P0C7T7 363 aa14.31□□□□□ -0.12
LINC01550-201ENST00000499006 NUTF2P61970 127 aaKnown RBP14.31□□□□□ -0.12
LINC01550-201ENST00000499006 SPINK13Q1W4C9 94 aa14.31□□□□□ -0.12
LINC01550-201ENST00000499006 ZFAND2AQ8N6M9 145 aa14.31□□□□□ -0.12
LINC01550-201ENST00000499006 IGF2BP2-AS1Q96M15 143 aa14.31□□□□□ -0.12
LINC01550-201ENST00000499006 TREM1Q9NP99 234 aa14.31□□□□□ -0.12
LINC01550-201ENST00000499006 TRBV20OR9-2A0A075B6H5 130 aa14.31□□□□□ -0.12
LINC01550-201ENST00000499006 KIR2DL5BA0A0G2JN68 375 aa14.31□□□□□ -0.12
LINC01550-201ENST00000499006 KIR2DL5BA0A0G2JPC4 375 aa14.31□□□□□ -0.12
LINC01550-201ENST00000499006 KLLNB2CW77 178 aa14.31□□□□□ -0.12
LINC01550-201ENST00000499006 CDKN1BP46527 198 aa14.31□□□□□ -0.12
LINC01550-201ENST00000499006 FXYD7P58549 80 aa14.31□□□□□ -0.12
LINC01550-201ENST00000499006 KIR2DL5AQ8N109 375 aa14.31□□□□□ -0.12
LINC01550-201ENST00000499006 KIR2DL5BQ8NHK3 375 aa14.31□□□□□ -0.12
LINC01550-201ENST00000499006 CSTL1Q9H114 145 aa14.31□□□□□ -0.12
LINC01550-201ENST00000499006 ZFP30Q9Y2G7 519 aa14.31□□□□□ -0.12
LINC01550-201ENST00000499006 CRXO43186 299 aaPredicted RBP14.3□□□□□ -0.12
LINC01550-201ENST00000499006 TSPOP30536 169 aa14.3□□□□□ -0.12
LINC01550-201ENST00000499006 LEPP41159 167 aa14.3□□□□□ -0.12
LINC01550-201ENST00000499006 CEBPGP53567 150 aa14.3□□□□□ -0.12
LINC01550-201ENST00000499006 KIR3DS1Q14943 382 aa14.3□□□□□ -0.12
LINC01550-201ENST00000499006 SAPCD1Q5SSQ6 148 aa14.3□□□□□ -0.12
LINC01550-201ENST00000499006 C8orf49Q96NF6 230 aa14.3□□□□□ -0.12
LINC01550-201ENST00000499006 APOC4P55056 127 aa14.29□□□□□ -0.12
LINC01550-201ENST00000499006 COX8CQ7Z4L0 72 aa14.29□□□□□ -0.12
LINC01550-201ENST00000499006 NDFIP1Q9BT67 221 aa14.29□□□□□ -0.12
LINC01550-201ENST00000499006 MLST8Q9BVC4 326 aa14.29□□□□□ -0.12
LINC01550-201ENST00000499006 C9JCJ5 164 aa14.28□□□□□ -0.12
LINC01550-201ENST00000499006 AMBPP02760 352 aa14.28□□□□□ -0.12
LINC01550-201ENST00000499006 ZNF674Q2M3X9 581 aa14.28□□□□□ -0.12
LINC01550-201ENST00000499006 CENPWQ5EE01 88 aa14.28□□□□□ -0.12
LINC01550-201ENST00000499006 PRR9Q5T870 116 aa14.28□□□□□ -0.12
LINC01550-201ENST00000499006 BAGE2Q86Y30 109 aa14.28□□□□□ -0.12
LINC01550-201ENST00000499006 TMEM183AQ8IXX5 376 aa14.28□□□□□ -0.12
LINC01550-201ENST00000499006 TRAV12-2A0A075B6T6 113 aa14.27□□□□□ -0.12
LINC01550-201ENST00000499006 IGLV2-8P01709 118 aa14.27□□□□□ -0.12
LINC01550-201ENST00000499006 SFTA3P0C7M3 94 aa14.27□□□□□ -0.12
LINC01550-201ENST00000499006 SMIM7Q9BQ49 75 aa14.27□□□□□ -0.12
LINC01550-201ENST00000499006 XCL2Q9UBD3 114 aa14.27□□□□□ -0.12
LINC01550-201ENST00000499006 MEGF8Q7Z7M0 2845 aa14.27□□□□□ -0.12
LINC01550-201ENST00000499006 CA1P00915 261 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms