RNA–Protein interactions for RNA: ENST00000498213.1

USP54-217, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 815 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-217ENST00000498213 PSG9Q00887 426 aa2.69□□□□□ -1.98
USP54-217ENST00000498213 DHODHQ02127 395 aa2.69□□□□□ -1.98
USP54-217ENST00000498213 DHRS2Q13268 280 aa2.69□□□□□ -1.98
USP54-217ENST00000498213 SCGB2B2Q4G0G5 96 aa2.69□□□□□ -1.98
USP54-217ENST00000498213 RNASE10Q5GAN6 216 aaKnown RBP2.69□□□□□ -1.98
USP54-217ENST00000498213 SIGLEC15Q6ZMC9 328 aa2.69□□□□□ -1.98
USP54-217ENST00000498213 STXBP6Q8NFX7 210 aa2.69□□□□□ -1.98
USP54-217ENST00000498213 OR11H7Q8NGC8 314 aa2.69□□□□□ -1.98
USP54-217ENST00000498213 OR51G1Q8NGK1 321 aa2.69□□□□□ -1.98
USP54-217ENST00000498213 MARCH1Q8TCQ1 289 aa2.69□□□□□ -1.98
USP54-217ENST00000498213 IGF2BP2-AS1Q96M15 143 aa2.69□□□□□ -1.98
USP54-217ENST00000498213 ATG101Q9BSB4 218 aa2.69□□□□□ -1.98
USP54-217ENST00000498213 HINT2Q9BX68 163 aa2.69□□□□□ -1.98
USP54-217ENST00000498213 RPRMQ9NS64 109 aa2.69□□□□□ -1.98
USP54-217ENST00000498213 TRAV3A0A0B4J244 114 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 IGHV3-35A0A0C4DH35 117 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 C3orf85A0A1B0GTC6 90 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 CENPXA8MT69 81 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 DISC1C4P0D8 188 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 SIX6O95475 246 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 CDS2O95674 445 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 C1QBP02746 253 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 IL5P05113 134 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 ATP5G1P05496 136 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 ZNF688P0C7X2 276 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 SULT1A3P0DMM9 295 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 SULT1A4P0DMN0 295 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 RNASE2P10153 161 aaKnown RBP2.68□□□□□ -1.98
USP54-217ENST00000498213 SLC25A6P12236 298 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 CXCL2P19875 107 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 C4BPBP20851 252 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 UCP1P25874 307 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 OR10J1P30954 320 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 FAUP35544 74 aaKnown RBP2.68□□□□□ -1.98
USP54-217ENST00000498213 GALR1P47211 349 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 ATP5G3P48201 142 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 TFPI2P48307 235 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 TAS2R60P59551 318 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 FXYD4P59646 89 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 DAD1P61803 113 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 RRAS2P62070 204 aaPredicted RBP2.68□□□□□ -1.98
USP54-217ENST00000498213 SLAQ13239 276 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 PPP1R1AQ13522 171 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 MEF2DQ14814 521 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 USF2Q15853 346 aaPredicted RBP2.68□□□□□ -1.98
USP54-217ENST00000498213 Q5BKY6 102 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 NMSQ5H8A3 153 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 PSMG4Q5JS54 123 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 LEMD1Q68G75 181 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 TMED4Q7Z7H5 227 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 Q8N377 158 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 OR1B1Q8NGR6 318 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 TERB2Q8NHR7 220 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 COQ8AQ8NI60 647 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 RBPMSQ93062 196 aaKnown RBP2.68□□□□□ -1.98
USP54-217ENST00000498213 PINX1Q96BK5 328 aaKnown RBP2.68□□□□□ -1.98
USP54-217ENST00000498213 C16orf74Q96GX8 76 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 CIB3Q96Q77 187 aaPredicted RBP2.68□□□□□ -1.98
USP54-217ENST00000498213 RTBDNQ9BSG5 229 aaPredicted RBP2.68□□□□□ -1.98
USP54-217ENST00000498213 Q9H3A6 140 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 COPZ2Q9P299 210 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 GPR132Q9UNW8 380 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 S4R3C0 116 aa2.68□□□□□ -1.98
USP54-217ENST00000498213 TRAV9-2A0A087WT02 112 aa2.67□□□□□ -1.98
USP54-217ENST00000498213 C9orf170A2RU37 121 aa2.67□□□□□ -1.98
USP54-217ENST00000498213 CCSO14618 274 aa2.67□□□□□ -1.98
USP54-217ENST00000498213 PRAF2O60831 178 aa2.67□□□□□ -1.98
USP54-217ENST00000498213 CCNKO75909 580 aa2.67□□□□□ -1.98
USP54-217ENST00000498213 SFT2D2O95562 160 aa2.67□□□□□ -1.98
USP54-217ENST00000498213 INSP01308 110 aa2.67□□□□□ -1.98
USP54-217ENST00000498213 OR4E1P0C645 316 aa2.67□□□□□ -1.98
USP54-217ENST00000498213 ANXA3P12429 323 aa2.67□□□□□ -1.98
USP54-217ENST00000498213 AKR1C4P17516 323 aa2.67□□□□□ -1.98
USP54-217ENST00000498213 H2BFSP57053 126 aa2.67□□□□□ -1.98
USP54-217ENST00000498213 PIGPP57054 158 aa2.67□□□□□ -1.98
USP54-217ENST00000498213 TDRG1Q3Y452 100 aa2.67□□□□□ -1.98
USP54-217ENST00000498213 HIGD2BQ4VC39 106 aa2.67□□□□□ -1.98
USP54-217ENST00000498213 FAM222AQ5U5X8 452 aa2.67□□□□□ -1.98
USP54-217ENST00000498213 PRSS54Q6PEW0 395 aa2.67□□□□□ -1.98
USP54-217ENST00000498213 AKAP14Q86UN6 197 aa2.67□□□□□ -1.98
USP54-217ENST00000498213 ZNF709Q8N972 641 aa2.67□□□□□ -1.98
USP54-217ENST00000498213 THAP8Q8NA92 274 aa2.67□□□□□ -1.98
USP54-217ENST00000498213 ZNRF2Q8NHG8 242 aa2.67□□□□□ -1.98
USP54-217ENST00000498213 LHFPL5Q8TAF8 219 aa2.67□□□□□ -1.98
USP54-217ENST00000498213 ZNF431Q8TF32 576 aaPredicted RBP2.67□□□□□ -1.98
USP54-217ENST00000498213 ODF3Q96PU9 254 aa2.67□□□□□ -1.98
USP54-217ENST00000498213 TRGV9Q99603 122 aa2.67□□□□□ -1.98
USP54-217ENST00000498213 PRRT1Q99946 306 aa2.67□□□□□ -1.98
USP54-217ENST00000498213 SLC25A21Q9BQT8 299 aaPredicted RBP2.67□□□□□ -1.98
USP54-217ENST00000498213 TMEM222Q9H0R3 208 aa2.67□□□□□ -1.98
USP54-217ENST00000498213 SH3BGRL3Q9H299 93 aa2.67□□□□□ -1.98
USP54-217ENST00000498213 DOK5Q9P104 306 aa2.67□□□□□ -1.98
USP54-217ENST00000498213 SCP2D1Q9UJQ7 156 aa2.67□□□□□ -1.98
USP54-217ENST00000498213 KCNIP3Q9Y2W7 256 aa2.67□□□□□ -1.98
USP54-217ENST00000498213 TMEM56-RWDD3S4R434 201 aa2.67□□□□□ -1.98
USP54-217ENST00000498213 A0A0B4J2A0 478 aa2.66□□□□□ -1.98
USP54-217ENST00000498213 A0A0J9YX75 114 aa2.66□□□□□ -1.98
USP54-217ENST00000498213 CRYM-AS1A6NIL9 109 aa2.66□□□□□ -1.98
USP54-217ENST00000498213 FNDC10F2Z333 226 aa2.66□□□□□ -1.98
USP54-217ENST00000498213 H7BYZ3 331 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms