RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 THAP8Q8NA92 274 aa6.38□□□□□ -1.39
HLA-DMB-262ENST00000498020 LAMA1P25391 3075 aa6.38□□□□□ -1.39
HLA-DMB-262ENST00000498020 HIGD1CA8MV81 97 aa6.38□□□□□ -1.39
HLA-DMB-262ENST00000498020 RNASE4P34096 147 aaKnown RBP6.38□□□□□ -1.39
HLA-DMB-262ENST00000498020 TMEM190Q8WZ59 177 aa6.38□□□□□ -1.39
HLA-DMB-262ENST00000498020 FNDC4Q9H6D8 234 aaPredicted RBP6.38□□□□□ -1.39
HLA-DMB-262ENST00000498020 GSN-AS1Q9NRJ2 163 aa6.38□□□□□ -1.39
HLA-DMB-262ENST00000498020 TPSG1Q9NRR2 321 aa6.38□□□□□ -1.39
HLA-DMB-262ENST00000498020 FSTL3O95633 263 aa6.37□□□□□ -1.39
HLA-DMB-262ENST00000498020 PRB2P02812 416 aaPredicted RBP6.37□□□□□ -1.39
HLA-DMB-262ENST00000498020 IZUMO1RA6ND01 250 aa6.37□□□□□ -1.39
HLA-DMB-262ENST00000498020 GHRHP01286 108 aa6.37□□□□□ -1.39
HLA-DMB-262ENST00000498020 PPBPP02775 128 aa6.37□□□□□ -1.39
HLA-DMB-262ENST00000498020 CNTFRP26992 372 aa6.37□□□□□ -1.39
HLA-DMB-262ENST00000498020 C5orf64Q2M2E5 130 aa6.37□□□□□ -1.39
HLA-DMB-262ENST00000498020 ACTL10Q5JWF8 245 aa6.37□□□□□ -1.39
HLA-DMB-262ENST00000498020 CFAP161Q6P656 301 aa6.37□□□□□ -1.39
HLA-DMB-262ENST00000498020 FOXC2Q99958 501 aa6.37□□□□□ -1.39
HLA-DMB-262ENST00000498020 RNASE7Q9H1E1 156 aaKnown RBP6.37□□□□□ -1.39
HLA-DMB-262ENST00000498020 DPH3P1Q9H4G8 78 aa6.37□□□□□ -1.39
HLA-DMB-262ENST00000498020 TBL2Q9Y4P3 447 aaKnown RBP6.37□□□□□ -1.39
HLA-DMB-262ENST00000498020 FRYLO94915 3013 aa6.37□□□□□ -1.39
HLA-DMB-262ENST00000498020 TRAV41A0A0B4J266 112 aa6.37□□□□□ -1.39
HLA-DMB-262ENST00000498020 IGLV1-47P01700 117 aa6.37□□□□□ -1.39
HLA-DMB-262ENST00000498020 SMIM13P0DJ93 91 aa6.37□□□□□ -1.39
HLA-DMB-262ENST00000498020 IGHV4-38-2P0DP08 117 aa6.37□□□□□ -1.39
HLA-DMB-262ENST00000498020 GFI1BQ5VTD9 330 aa6.37□□□□□ -1.39
HLA-DMB-262ENST00000498020 SVIPQ8NHG7 77 aa6.37□□□□□ -1.39
HLA-DMB-262ENST00000498020 NUDT11Q96G61 164 aa6.37□□□□□ -1.39
HLA-DMB-262ENST00000498020 HIST1H2BLQ99880 126 aa6.37□□□□□ -1.39
HLA-DMB-262ENST00000498020 IGHV2-70DA0A0C4DH43 119 aa6.37□□□□□ -1.39
HLA-DMB-262ENST00000498020 IGLC7A0M8Q6 106 aa6.37□□□□□ -1.39
HLA-DMB-262ENST00000498020 C22orf46C9J442 243 aa6.37□□□□□ -1.39
HLA-DMB-262ENST00000498020 PSG1P11464 419 aa6.37□□□□□ -1.39
HLA-DMB-262ENST00000498020 LEPP41159 167 aa6.37□□□□□ -1.39
HLA-DMB-262ENST00000498020 PAX8Q06710 450 aa6.37□□□□□ -1.39
HLA-DMB-262ENST00000498020 PEF1Q9UBV8 284 aaKnown RBP6.37□□□□□ -1.39
HLA-DMB-262ENST00000498020 IGLV2-23P01705 113 aa6.36□□□□□ -1.39
HLA-DMB-262ENST00000498020 IFI27P40305 119 aaPredicted RBP6.36□□□□□ -1.39
HLA-DMB-262ENST00000498020 CACNG7P62955 275 aa6.36□□□□□ -1.39
HLA-DMB-262ENST00000498020 ZNF114Q8NC26 417 aa6.36□□□□□ -1.39
HLA-DMB-262ENST00000498020 VCX2Q9H322 139 aa6.36□□□□□ -1.39
HLA-DMB-262ENST00000498020 MRPL16Q9NX20 251 aaKnown RBP6.36□□□□□ -1.39
HLA-DMB-262ENST00000498020 PSG8Q9UQ74 426 aa6.36□□□□□ -1.39
HLA-DMB-262ENST00000498020 A0A1B0GUS0 222 aa6.36□□□□□ -1.39
HLA-DMB-262ENST00000498020 CMC4P56277 68 aaPredicted RBP6.36□□□□□ -1.39
HLA-DMB-262ENST00000498020 OR10J3Q5JRS4 329 aa6.36□□□□□ -1.39
HLA-DMB-262ENST00000498020 SYNJ2BPP57105 145 aa6.36□□□□□ -1.39
HLA-DMB-262ENST00000498020 CDSNQ15517 529 aa6.36□□□□□ -1.39
HLA-DMB-262ENST00000498020 GNB1LQ9BYB4 327 aa6.36□□□□□ -1.39
HLA-DMB-262ENST00000498020 ST20Q9HBF5 79 aa6.36□□□□□ -1.39
HLA-DMB-262ENST00000498020 GGTLC3B5MD39 225 aa6.35□□□□□ -1.39
HLA-DMB-262ENST00000498020 YPEL4Q96NS1 127 aa6.35□□□□□ -1.39
HLA-DMB-262ENST00000498020 NXT2Q9NPJ8 142 aaKnown RBP6.35□□□□□ -1.39
HLA-DMB-262ENST00000498020 IGKV1OR2-108A0A075B7D4 117 aa6.35□□□□□ -1.39
HLA-DMB-262ENST00000498020 TRBV7-9A0A0J9YWB2 115 aa6.35□□□□□ -1.39
HLA-DMB-262ENST00000498020 OVOL1O14753 267 aa6.35□□□□□ -1.39
HLA-DMB-262ENST00000498020 GNG5P63218 68 aa6.35□□□□□ -1.39
HLA-DMB-262ENST00000498020 PYY3Q5JQD4 70 aa6.35□□□□□ -1.39
HLA-DMB-262ENST00000498020 NUDT10Q8NFP7 164 aa6.35□□□□□ -1.39
HLA-DMB-262ENST00000498020 OR11H6Q8NGC7 330 aa6.35□□□□□ -1.39
HLA-DMB-262ENST00000498020 GLMPQ8WWB7 406 aa6.35□□□□□ -1.39
HLA-DMB-262ENST00000498020 SLC25A2Q9BXI2 301 aa6.35□□□□□ -1.39
HLA-DMB-262ENST00000498020 TRGV11A0A075B6L2 103 aa6.35□□□□□ -1.39
HLA-DMB-262ENST00000498020 TRGV4A0A0C4DH28 118 aa6.35□□□□□ -1.39
HLA-DMB-262ENST00000498020 TNFRSF13BO14836 293 aaPredicted RBP6.35□□□□□ -1.39
HLA-DMB-262ENST00000498020 AMBPP02760 352 aa6.35□□□□□ -1.39
HLA-DMB-262ENST00000498020 ADMP35318 185 aa6.35□□□□□ -1.39
HLA-DMB-262ENST00000498020 TTC32Q5I0X7 151 aa6.35□□□□□ -1.39
HLA-DMB-262ENST00000498020 Q8N7P7 452 aa6.35□□□□□ -1.39
HLA-DMB-262ENST00000498020 SLC25A39Q9BZJ4 359 aaPredicted RBP6.35□□□□□ -1.39
HLA-DMB-262ENST00000498020 CYSLTR1Q9Y271 337 aa6.35□□□□□ -1.39
HLA-DMB-262ENST00000498020 LINC01549A6NIU2 74 aa6.35□□□□□ -1.39
HLA-DMB-262ENST00000498020 FBLN7Q53RD9 439 aa6.35□□□□□ -1.39
HLA-DMB-262ENST00000498020 ZNF562Q6V9R5 426 aa6.35□□□□□ -1.39
HLA-DMB-262ENST00000498020 WFDC12Q8WWY7 111 aa6.35□□□□□ -1.39
HLA-DMB-262ENST00000498020 E7EUB6 86 aa6.34□□□□□ -1.39
HLA-DMB-262ENST00000498020 TMEM95Q3KNT9 176 aa6.34□□□□□ -1.39
HLA-DMB-262ENST00000498020 IGFBPL1Q8WX77 278 aa6.34□□□□□ -1.39
HLA-DMB-262ENST00000498020 UBE2E1P51965 193 aa6.34□□□□□ -1.39
HLA-DMB-262ENST00000498020 CTAG1AP78358 180 aa6.34□□□□□ -1.39
HLA-DMB-262ENST00000498020 KLF17Q5JT82 389 aaPredicted RBP6.34□□□□□ -1.39
HLA-DMB-262ENST00000498020 C14orf144Q96I85 54 aa6.34□□□□□ -1.39
HLA-DMB-262ENST00000498020 PSMG3-AS1Q96PY0 264 aa6.34□□□□□ -1.39
HLA-DMB-262ENST00000498020 MCRIP2Q9BUT9 160 aaKnown RBP6.34□□□□□ -1.39
HLA-DMB-262ENST00000498020 PTPRBP23467 1997 aa6.34□□□□□ -1.39
HLA-DMB-262ENST00000498020 DNAH14Q0VDD8 3507 aa6.34□□□□□ -1.39
HLA-DMB-262ENST00000498020 RBMY1BA6NDE4 496 aaKnown RBP6.34□□□□□ -1.39
HLA-DMB-262ENST00000498020 RBMY1EA6NEQ0 496 aaKnown RBP6.34□□□□□ -1.39
HLA-DMB-262ENST00000498020 F2Z2F3 143 aa6.34□□□□□ -1.39
HLA-DMB-262ENST00000498020 APOMO95445 188 aa6.34□□□□□ -1.39
HLA-DMB-262ENST00000498020 RBMY1DP0C7P1 496 aaKnown RBP6.34□□□□□ -1.39
HLA-DMB-262ENST00000498020 RBMY1A1P0DJD3 496 aaKnown RBP6.34□□□□□ -1.39
HLA-DMB-262ENST00000498020 RBMY1CP0DJD4 496 aa6.34□□□□□ -1.39
HLA-DMB-262ENST00000498020 ORMDL2Q53FV1 153 aa6.34□□□□□ -1.39
HLA-DMB-262ENST00000498020 DTX2Q86UW9 622 aa6.34□□□□□ -1.39
HLA-DMB-262ENST00000498020 RITA1Q96K30 269 aa6.34□□□□□ -1.39
HLA-DMB-262ENST00000498020 YPEL3P61236 119 aaPredicted RBP6.33□□□□□ -1.4
HLA-DMB-262ENST00000498020 C15orf32Q32M92 178 aa6.33□□□□□ -1.4
HLA-DMB-262ENST00000498020 FAM19A2Q8N3H0 131 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms