RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 OR2Z1Q8NG97 314 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 OR10G6Q8NH81 332 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 ATP6V0E2Q8NHE4 81 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 PPTC7Q8NI37 304 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 JOSD2Q8TAC2 188 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 STAG3L4Q8TBR4 150 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 PPP1R1CQ8WVI7 109 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 RTN4IP1Q8WWV3 396 aaPredicted RBP1.42□□□□□ -2.18
CBX3-208ENST00000497498 BAALCQ8WXS3 180 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 PP6455Q8WZ26 134 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 NAT6Q93015 286 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 TSLPQ969D9 159 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 RAB37Q96AX2 223 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 BORCS7Q96B45 105 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 ADTRPQ96IZ2 230 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 DNAJC30Q96LL9 226 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 C18orf15Q96N68 181 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 TRIB3Q96RU7 358 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 TXNDC17Q9BRA2 123 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 GINS3Q9BRX5 216 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 ANAPC13Q9BS18 74 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 AGMATQ9BSE5 352 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 ADAT1Q9BUB4 502 aaKnown RBP1.42□□□□□ -2.18
CBX3-208ENST00000497498 EFCAB11Q9BUY7 163 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 CST11Q9H112 138 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 MS4A6AQ9H2W1 248 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 ZNF442Q9H7R0 627 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 CA10Q9NS85 328 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 OR5V1Q9UGF6 321 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 SLC23A2Q9UGH3 650 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 NAT8BQ9UHF3 227 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 AK3Q9UIJ7 227 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 BOKQ9UMX3 212 aaPredicted RBP1.42□□□□□ -2.18
CBX3-208ENST00000497498 WASHC3Q9Y3C0 194 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 UFC1Q9Y3C8 167 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 FIS1Q9Y3D6 152 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 LSM5Q9Y4Y9 91 aaKnown RBP1.42□□□□□ -2.18
CBX3-208ENST00000497498 SOX21Q9Y651 276 aaPredicted RBP1.42□□□□□ -2.18
CBX3-208ENST00000497498 ENPP4Q9Y6X5 453 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 HRNRQ86YZ3 2850 aaPredicted RBP1.42□□□□□ -2.18
CBX3-208ENST00000497498 DSPPQ9NZW4 1301 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 HECTD4Q9Y4D8 3996 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 SHANK1Q9Y566 2161 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 MYLKQ15746 1914 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 PLXND1Q9Y4D7 1925 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 IGLV3-12A0A075B6K2 115 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 IGHV3-72A0A0B4J1Y9 119 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 TRAV1-1A0A0B4J248 108 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 IGHV3OR16-9A0A0B4J2B5 98 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 A0A1W2PRF3 423 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 A0A1W2PRM7 423 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 C5orf49A4QMS7 147 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 SMIM9A6NGZ8 99 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 ZNF860A6NHJ4 632 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 TMEM212A6NML5 194 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 CD300LBA8K4G0 201 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 A8MUU9 505 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.41□□□□□ -2.18
CBX3-208ENST00000497498 H3BRM9 83 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 C15orf65H3BRN8 121 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 K7EP34 96 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 GEMIN2O14893 280 aaKnown RBP1.41□□□□□ -2.18
CBX3-208ENST00000497498 RER1O15258 196 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 HYPMO75409 117 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 DEDDO75618 318 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 SFT2D2O95562 160 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 KRASP01116 189 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 CTSDP07339 412 aaPredicted RBP1.41□□□□□ -2.18
CBX3-208ENST00000497498 OR4A8P0C604 315 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 FABP2P12104 132 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 S100A7P31151 101 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 CFHR2P36980 270 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 ASIPP42127 132 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 LPAR6P43657 344 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 GALR1P47211 349 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 UBE2E1P51965 193 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 STC1P52823 247 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 H2BFSP57053 126 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 SMAGPQ0VAQ4 97 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 Q0VG73 95 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 KLRD1Q13241 179 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 HES1Q14469 280 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 PAFAH1B3Q15102 231 aaKnown RBP1.41□□□□□ -2.18
CBX3-208ENST00000497498 PDGFRLQ15198 375 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 ELOCQ15369 112 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 MMDQ15546 238 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 OR1Q1Q15612 314 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 OR8B8Q15620 311 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 MSMO1Q15800 293 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 MPV17LQ2QL34 196 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 ACTL10Q5JWF8 245 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 TMEM78Q5T7P6 136 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 ZNF322Q6U7Q0 402 aaPredicted RBP1.41□□□□□ -2.18
CBX3-208ENST00000497498 Q6ZS52 159 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 CYP2G1PQ6ZSU1 146 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 APRG1Q8IVJ8 170 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 SGPP2Q8IWX5 399 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 LRRC25Q8N386 305 aaPredicted RBP1.41□□□□□ -2.18
CBX3-208ENST00000497498 SMIM20Q8N5G0 67 aa1.41□□□□□ -2.18
CBX3-208ENST00000497498 TEX29Q8N6K0 151 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms