RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 C4orf3Q8WVX3 66 aa4.02□□□□□ -1.77
GGPS1-208ENST00000497327 NARS2Q96I59 477 aaKnown RBP4.02□□□□□ -1.77
GGPS1-208ENST00000497327 OR5B12Q96R08 314 aa4.02□□□□□ -1.77
GGPS1-208ENST00000497327 OR4F4Q96R69 305 aa4.02□□□□□ -1.77
GGPS1-208ENST00000497327 NKX6-2Q9C056 277 aaPredicted RBP4.02□□□□□ -1.77
GGPS1-208ENST00000497327 RNF24Q9Y225 148 aa4.02□□□□□ -1.77
GGPS1-208ENST00000497327 SETXQ7Z333 2677 aaKnown RBP4.01□□□□□ -1.77
GGPS1-208ENST00000497327 TRBV20OR9-2A0A075B6H5 130 aa4.01□□□□□ -1.77
GGPS1-208ENST00000497327 IGHV7-4-1A0A0J9YVY3 117 aa4.01□□□□□ -1.77
GGPS1-208ENST00000497327 TMEM213A2RRL7 107 aa4.01□□□□□ -1.77
GGPS1-208ENST00000497327 A8MWP6 167 aa4.01□□□□□ -1.77
GGPS1-208ENST00000497327 H3BTX0 84 aa4.01□□□□□ -1.77
GGPS1-208ENST00000497327 SLC17A3O00476 420 aa4.01□□□□□ -1.77
GGPS1-208ENST00000497327 UBE2CO00762 179 aa4.01□□□□□ -1.77
GGPS1-208ENST00000497327 ZNF207O43670 478 aaKnown RBP4.01□□□□□ -1.77
GGPS1-208ENST00000497327 TCF21O43680 179 aa4.01□□□□□ -1.77
GGPS1-208ENST00000497327 ZNF253O75346 499 aa4.01□□□□□ -1.77
GGPS1-208ENST00000497327 SNRPCP09234 159 aaKnown RBP4.01□□□□□ -1.77
GGPS1-208ENST00000497327 CD28P10747 220 aa4.01□□□□□ -1.77
GGPS1-208ENST00000497327 S100A7P31151 101 aa4.01□□□□□ -1.77
GGPS1-208ENST00000497327 KRTAP10-3P60369 221 aa4.01□□□□□ -1.77
GGPS1-208ENST00000497327 RANP62826 216 aaKnown RBP4.01□□□□□ -1.77
GGPS1-208ENST00000497327 KLF5Q13887 457 aaPredicted RBP4.01□□□□□ -1.77
GGPS1-208ENST00000497327 PDE6HQ13956 83 aa4.01□□□□□ -1.77
GGPS1-208ENST00000497327 FAM106AQ4KMX7 169 aa4.01□□□□□ -1.77
GGPS1-208ENST00000497327 FAM74A3Q4VXF1 159 aa4.01□□□□□ -1.77
GGPS1-208ENST00000497327 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.01□□□□□ -1.77
GGPS1-208ENST00000497327 LYPD1Q8N2G4 141 aa4.01□□□□□ -1.77
GGPS1-208ENST00000497327 SVBPQ8N300 66 aa4.01□□□□□ -1.77
GGPS1-208ENST00000497327 OR4F17Q8NGA8 305 aa4.01□□□□□ -1.77
GGPS1-208ENST00000497327 BLNKQ8WV28 456 aa4.01□□□□□ -1.77
GGPS1-208ENST00000497327 GPR82Q96P67 336 aa4.01□□□□□ -1.77
GGPS1-208ENST00000497327 METTL26Q96S19 204 aa4.01□□□□□ -1.77
GGPS1-208ENST00000497327 TCEAL7Q9BRU2 100 aa4.01□□□□□ -1.77
GGPS1-208ENST00000497327 C20orf24Q9BUV8 137 aa4.01□□□□□ -1.77
GGPS1-208ENST00000497327 PARLQ9H300 379 aa4.01□□□□□ -1.77
GGPS1-208ENST00000497327 Q9H3A6 140 aa4.01□□□□□ -1.77
GGPS1-208ENST00000497327 OTORQ9NRC9 128 aa4.01□□□□□ -1.77
GGPS1-208ENST00000497327 SMPXQ9UHP9 88 aa4.01□□□□□ -1.77
GGPS1-208ENST00000497327 EPDR1Q9UM22 224 aa4.01□□□□□ -1.77
GGPS1-208ENST00000497327 KLF12Q9Y4X4 402 aa4.01□□□□□ -1.77
GGPS1-208ENST00000497327 IGHV3OR16-13A0A075B7E8 117 aa4□□□□□ -1.77
GGPS1-208ENST00000497327 IGHV3-49A0A0A0MS15 119 aa4□□□□□ -1.77
GGPS1-208ENST00000497327 IGHV3-74A0A0B4J1X5 117 aa4□□□□□ -1.77
GGPS1-208ENST00000497327 TRAV8-2A0A0B4J237 113 aa4□□□□□ -1.77
GGPS1-208ENST00000497327 IGHV3-66A0A0C4DH42 116 aa4□□□□□ -1.77
GGPS1-208ENST00000497327 PGPA6NDG6 321 aa4□□□□□ -1.77
GGPS1-208ENST00000497327 ZNF727A8MUV8 499 aa4□□□□□ -1.77
GGPS1-208ENST00000497327 C9JCJ5 164 aa4□□□□□ -1.77
GGPS1-208ENST00000497327 USP17L23D6RBM5 183 aa4□□□□□ -1.77
GGPS1-208ENST00000497327 SOCS3O14543 225 aa4□□□□□ -1.77
GGPS1-208ENST00000497327 CHEK1O14757 476 aa4□□□□□ -1.77
GGPS1-208ENST00000497327 IGLV2-8P01709 118 aa4□□□□□ -1.77
GGPS1-208ENST00000497327 CFC1BP0CG36 223 aa4□□□□□ -1.77
GGPS1-208ENST00000497327 CFC1P0CG37 223 aa4□□□□□ -1.77
GGPS1-208ENST00000497327 IGHV4-30-4P0DP06 118 aa4□□□□□ -1.77
GGPS1-208ENST00000497327 EDN2P20800 178 aa4□□□□□ -1.77
GGPS1-208ENST00000497327 TMEM241Q24JQ0 296 aa4□□□□□ -1.77
GGPS1-208ENST00000497327 HIST2H2BDQ6DRA6 164 aa4□□□□□ -1.77
GGPS1-208ENST00000497327 ADAMTSL5Q6ZMM2 481 aa4□□□□□ -1.77
GGPS1-208ENST00000497327 OR8I2Q8N0Y5 310 aa4□□□□□ -1.77
GGPS1-208ENST00000497327 ARL6IP6Q8N6S5 226 aa4□□□□□ -1.77
GGPS1-208ENST00000497327 C5orf17Q8NAS9 161 aa4□□□□□ -1.77
GGPS1-208ENST00000497327 OR1N2Q8NGR9 330 aa4□□□□□ -1.77
GGPS1-208ENST00000497327 HIST1H2BAQ96A08 127 aa4□□□□□ -1.77
GGPS1-208ENST00000497327 RPUSD4Q96CM3 377 aaKnown RBP4□□□□□ -1.77
GGPS1-208ENST00000497327 TVP23CQ96ET8 276 aa4□□□□□ -1.77
GGPS1-208ENST00000497327 CITED2Q99967 270 aaPredicted RBP4□□□□□ -1.77
GGPS1-208ENST00000497327 DERL1Q9BUN8 251 aa4□□□□□ -1.77
GGPS1-208ENST00000497327 KRTAP4-4Q9BYR3 166 aa4□□□□□ -1.77
GGPS1-208ENST00000497327 ZNF331Q9NQX6 463 aaPredicted RBP4□□□□□ -1.77
GGPS1-208ENST00000497327 DAZ1Q9NQZ3 744 aaKnown RBP4□□□□□ -1.77
GGPS1-208ENST00000497327 NAT8Q9UHE5 227 aa4□□□□□ -1.77
GGPS1-208ENST00000497327 UFC1Q9Y3C8 167 aa4□□□□□ -1.77
GGPS1-208ENST00000497327 SETD2Q9BYW2 2564 aaPredicted RBP4□□□□□ -1.77
GGPS1-208ENST00000497327 NF1P21359 2839 aa3.99□□□□□ -1.77
GGPS1-208ENST00000497327 JMJD1CQ15652 2540 aa3.99□□□□□ -1.77
GGPS1-208ENST00000497327 TRBV6-1A0A0K0K1D8 114 aa3.99□□□□□ -1.77
GGPS1-208ENST00000497327 A0A1B0GUS0 222 aa3.99□□□□□ -1.77
GGPS1-208ENST00000497327 A0A1W2PS18 150 aa3.99□□□□□ -1.77
GGPS1-208ENST00000497327 ZNF320A2RRD8 509 aa3.99□□□□□ -1.77
GGPS1-208ENST00000497327 C7orf77A4D0Y5 90 aa3.99□□□□□ -1.77
GGPS1-208ENST00000497327 LINC01619G3V211 115 aa3.99□□□□□ -1.77
GGPS1-208ENST00000497327 DNASE2O00115 360 aaPredicted RBP3.99□□□□□ -1.77
GGPS1-208ENST00000497327 PEX7O00628 323 aa3.99□□□□□ -1.77
GGPS1-208ENST00000497327 SCO1O75880 301 aa3.99□□□□□ -1.77
GGPS1-208ENST00000497327 SNAPINO95295 136 aa3.99□□□□□ -1.77
GGPS1-208ENST00000497327 TCRAP04437 139 aa3.99□□□□□ -1.77
GGPS1-208ENST00000497327 RPL35P42766 123 aaKnown RBP3.99□□□□□ -1.77
GGPS1-208ENST00000497327 GALR1P47211 349 aa3.99□□□□□ -1.77
GGPS1-208ENST00000497327 MEOX2P50222 304 aa3.99□□□□□ -1.77
GGPS1-208ENST00000497327 CEBPGP53567 150 aa3.99□□□□□ -1.77
GGPS1-208ENST00000497327 SYNJ2BPP57105 145 aa3.99□□□□□ -1.77
GGPS1-208ENST00000497327 TAS2R60P59551 318 aa3.99□□□□□ -1.77
GGPS1-208ENST00000497327 RPL23P62829 140 aaKnown RBP3.99□□□□□ -1.77
GGPS1-208ENST00000497327 GNG5P63218 68 aa3.99□□□□□ -1.77
GGPS1-208ENST00000497327 PSG9Q00887 426 aa3.99□□□□□ -1.77
GGPS1-208ENST00000497327 PNRC1Q12796 327 aaPredicted RBP3.99□□□□□ -1.77
GGPS1-208ENST00000497327 TMEM183BQ1AE95 376 aa3.99□□□□□ -1.77
GGPS1-208ENST00000497327 RPEL1Q2QD12 228 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms