RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 WDR87Q6ZQQ6 2873 aa10.16□□□□□ -0.78
VEGFA-215ENST00000497139 AGRNO00468 2067 aa10.15□□□□□ -0.78
VEGFA-215ENST00000497139 SPEGQ15772 3267 aa10.15□□□□□ -0.78
VEGFA-215ENST00000497139 LOC107984156A0A0G2JMH3 177 aa10.15□□□□□ -0.78
VEGFA-215ENST00000497139 FABP5P3A8MUU1 101 aa10.15□□□□□ -0.78
VEGFA-215ENST00000497139 LGALS1P09382 135 aaKnown RBP10.15□□□□□ -0.78
VEGFA-215ENST00000497139 EGR2P11161 476 aaPredicted RBP10.15□□□□□ -0.78
VEGFA-215ENST00000497139 ARL17AQ8IVW1 177 aa10.15□□□□□ -0.78
VEGFA-215ENST00000497139 PRR25Q96S07 402 aa10.15□□□□□ -0.78
VEGFA-215ENST00000497139 DSCAMO60469 2012 aa10.15□□□□□ -0.78
VEGFA-215ENST00000497139 SNCGO76070 127 aa10.15□□□□□ -0.78
VEGFA-215ENST00000497139 DUX4L9Q6RFH8 374 aaPredicted RBP10.15□□□□□ -0.78
VEGFA-215ENST00000497139 C17orf77Q96MU5 243 aa10.15□□□□□ -0.78
VEGFA-215ENST00000497139 TNFRSF18Q9Y5U5 241 aa10.15□□□□□ -0.78
VEGFA-215ENST00000497139 TTC28Q96AY4 2481 aa10.15□□□□□ -0.78
VEGFA-215ENST00000497139 HEATR1Q9H583 2144 aaKnown RBP10.15□□□□□ -0.79
VEGFA-215ENST00000497139 FAM90A27PA6NNH2 459 aa10.14□□□□□ -0.79
VEGFA-215ENST00000497139 IFITM1P13164 125 aa10.14□□□□□ -0.79
VEGFA-215ENST00000497139 TMEM78Q5T7P6 136 aa10.14□□□□□ -0.79
VEGFA-215ENST00000497139 TEX36Q5VZQ5 186 aa10.14□□□□□ -0.79
VEGFA-215ENST00000497139 BDP1A6H8Y1 2624 aa10.14□□□□□ -0.79
VEGFA-215ENST00000497139 CCL13Q99616 98 aa10.14□□□□□ -0.79
VEGFA-215ENST00000497139 DEFB127Q9H1M4 99 aa10.14□□□□□ -0.79
VEGFA-215ENST00000497139 DNAJC13O75165 2243 aa10.14□□□□□ -0.79
VEGFA-215ENST00000497139 PRR14LQ5THK1 2151 aa10.13□□□□□ -0.79
VEGFA-215ENST00000497139 I3L2K1 104 aa10.13□□□□□ -0.79
VEGFA-215ENST00000497139 IGKV1-17P01599 117 aa10.13□□□□□ -0.79
VEGFA-215ENST00000497139 PRR30Q53SZ7 412 aaPredicted RBP10.13□□□□□ -0.79
VEGFA-215ENST00000497139 SPRNQ5BIV9 151 aa10.13□□□□□ -0.79
VEGFA-215ENST00000497139 ASCL2Q99929 193 aa10.13□□□□□ -0.79
VEGFA-215ENST00000497139 SRSF8Q9BRL6 282 aaKnown RBP10.13□□□□□ -0.79
VEGFA-215ENST00000497139 TPSG1Q9NRR2 321 aa10.13□□□□□ -0.79
VEGFA-215ENST00000497139 WDFY4Q6ZS81 3184 aa10.13□□□□□ -0.79
VEGFA-215ENST00000497139 NAV3Q8IVL0 2385 aa10.13□□□□□ -0.79
VEGFA-215ENST00000497139 PATE3B3GLJ2 98 aa10.13□□□□□ -0.79
VEGFA-215ENST00000497139 NDUFA3O95167 84 aa10.13□□□□□ -0.79
VEGFA-215ENST00000497139 CD7P09564 240 aa10.13□□□□□ -0.79
VEGFA-215ENST00000497139 SLC25A16P16260 332 aa10.13□□□□□ -0.79
VEGFA-215ENST00000497139 TTC32Q5I0X7 151 aa10.13□□□□□ -0.79
VEGFA-215ENST00000497139 ANKRD29Q8N6D5 301 aa10.13□□□□□ -0.79
VEGFA-215ENST00000497139 FAM216BQ8N7L0 139 aa10.13□□□□□ -0.79
VEGFA-215ENST00000497139 PTH2Q96A98 100 aa10.13□□□□□ -0.79
VEGFA-215ENST00000497139 RAXQ9Y2V3 346 aa10.13□□□□□ -0.79
VEGFA-215ENST00000497139 M0R3E3 92 aa10.13□□□□□ -0.79
VEGFA-215ENST00000497139 CRYGBP07316 175 aa10.13□□□□□ -0.79
VEGFA-215ENST00000497139 SCGB1C2P0DMR2 95 aa10.13□□□□□ -0.79
VEGFA-215ENST00000497139 FAM201AQ5SY85 155 aa10.13□□□□□ -0.79
VEGFA-215ENST00000497139 IL17RELQ6ZVW7 336 aa10.13□□□□□ -0.79
VEGFA-215ENST00000497139 RAI1Q7Z5J4 1906 aaPredicted RBP10.12□□□□□ -0.79
VEGFA-215ENST00000497139 TCL1BO95988 128 aa10.12□□□□□ -0.79
VEGFA-215ENST00000497139 DIAPH2-AS1Q14236 149 aa10.12□□□□□ -0.79
VEGFA-215ENST00000497139 ZFP2Q6ZN57 461 aa10.12□□□□□ -0.79
VEGFA-215ENST00000497139 SMIM20Q8N5G0 67 aa10.12□□□□□ -0.79
VEGFA-215ENST00000497139 PSMG3-AS1Q96PY0 264 aa10.12□□□□□ -0.79
VEGFA-215ENST00000497139 IGLV3-9A0A075B6K5 115 aa10.12□□□□□ -0.79
VEGFA-215ENST00000497139 FCN3O75636 299 aa10.12□□□□□ -0.79
VEGFA-215ENST00000497139 GLRXP35754 106 aa10.12□□□□□ -0.79
VEGFA-215ENST00000497139 MSMPQ1L6U9 139 aa10.12□□□□□ -0.79
VEGFA-215ENST00000497139 DTX2Q86UW9 622 aa10.12□□□□□ -0.79
VEGFA-215ENST00000497139 RNF125Q96EQ8 232 aa10.12□□□□□ -0.79
VEGFA-215ENST00000497139 LINC01600Q96MT4 127 aa10.12□□□□□ -0.79
VEGFA-215ENST00000497139 SPRY3O43610 288 aa10.11□□□□□ -0.79
VEGFA-215ENST00000497139 C1orf122Q6ZSJ8 110 aa10.11□□□□□ -0.79
VEGFA-215ENST00000497139 PPP1R27Q86WC6 154 aa10.11□□□□□ -0.79
VEGFA-215ENST00000497139 NDUFA11Q86Y39 141 aa10.11□□□□□ -0.79
VEGFA-215ENST00000497139 ZNF491Q8N8L2 437 aa10.11□□□□□ -0.79
VEGFA-215ENST00000497139 AJUBAQ96IF1 538 aa10.11□□□□□ -0.79
VEGFA-215ENST00000497139 PROCRQ9UNN8 238 aa10.11□□□□□ -0.79
VEGFA-215ENST00000497139 TECTAO75443 2155 aa10.11□□□□□ -0.79
VEGFA-215ENST00000497139 IGHV3-21A0A0B4J1V1 117 aa10.11□□□□□ -0.79
VEGFA-215ENST00000497139 ARL3P36405 182 aa10.11□□□□□ -0.79
VEGFA-215ENST00000497139 TEX22C9J3V5 150 aa10.1□□□□□ -0.79
VEGFA-215ENST00000497139 SRSF9Q13242 221 aaKnown RBP eCLIP10.1□□□□□ -0.79
VEGFA-215ENST00000497139 C3orf36Q3SXR2 165 aa10.1□□□□□ -0.79
VEGFA-215ENST00000497139 ZNF672Q499Z4 452 aaPredicted RBP10.1□□□□□ -0.79
VEGFA-215ENST00000497139 CNEP1R1Q8N9A8 125 aa10.1□□□□□ -0.79
VEGFA-215ENST00000497139 MSRB1Q9NZV6 116 aa10.1□□□□□ -0.79
VEGFA-215ENST00000497139 GAS8-AS1O95177 125 aa10.1□□□□□ -0.79
VEGFA-215ENST00000497139 CLEC3BP05452 202 aa10.1□□□□□ -0.79
VEGFA-215ENST00000497139 ZNF575Q86XF7 245 aa10.1□□□□□ -0.79
VEGFA-215ENST00000497139 NRACQ8N912 160 aa10.1□□□□□ -0.79
VEGFA-215ENST00000497139 RAB1BQ9H0U4 201 aa10.1□□□□□ -0.79
VEGFA-215ENST00000497139 ZNF815PA8K554 130 aa10.09□□□□□ -0.79
VEGFA-215ENST00000497139 CCDC179H3BU77 68 aa10.09□□□□□ -0.79
VEGFA-215ENST00000497139 CNIH1O95406 144 aa10.09□□□□□ -0.79
VEGFA-215ENST00000497139 TNFAIP6P98066 277 aaPredicted RBP10.09□□□□□ -0.79
VEGFA-215ENST00000497139 MRPL23Q16540 153 aaKnown RBP10.09□□□□□ -0.79
VEGFA-215ENST00000497139 ORMDL2Q53FV1 153 aa10.09□□□□□ -0.79
VEGFA-215ENST00000497139 SIGLEC9Q9Y336 463 aa10.09□□□□□ -0.79
VEGFA-215ENST00000497139 SLC25A15Q9Y619 301 aa10.09□□□□□ -0.79
VEGFA-215ENST00000497139 SCGB1D4Q6XE38 83 aa10.09□□□□□ -0.79
VEGFA-215ENST00000497139 DEFB108BQ8NET1 73 aa10.09□□□□□ -0.79
VEGFA-215ENST00000497139 PRADC1Q9BSG0 188 aa10.09□□□□□ -0.79
VEGFA-215ENST00000497139 TMEM126AQ9H061 195 aa10.09□□□□□ -0.79
VEGFA-215ENST00000497139 COL27A1Q8IZC6 1860 aaPredicted RBP10.09□□□□□ -0.79
VEGFA-215ENST00000497139 ORM1P02763 201 aa10.08□□□□□ -0.8
VEGFA-215ENST00000497139 COX6B1P14854 86 aa10.08□□□□□ -0.8
VEGFA-215ENST00000497139 ZNF80P51504 273 aaPredicted RBP10.08□□□□□ -0.8
VEGFA-215ENST00000497139 C10orf126Q8N4M7 172 aa10.08□□□□□ -0.8
VEGFA-215ENST00000497139 NEXN-AS1Q8NBZ9 246 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms