RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 CITED2Q99967 270 aaPredicted RBP12.9□□□□□ -0.34
LMNA-216ENST00000496738 DERL1Q9BUN8 251 aa12.9□□□□□ -0.34
LMNA-216ENST00000496738 TMEM242Q9NWH2 141 aa12.9□□□□□ -0.34
LMNA-216ENST00000496738 SMAD5-AS1Q9Y6J3 95 aa12.9□□□□□ -0.34
LMNA-216ENST00000496738 A0A1W2PRE2 83 aa12.89□□□□□ -0.35
LMNA-216ENST00000496738 EXOC3-AS1Q8N2X6 119 aa12.89□□□□□ -0.35
LMNA-216ENST00000496738 OR11H1Q8NG94 326 aa12.89□□□□□ -0.35
LMNA-216ENST00000496738 TMEM250H0YL14 139 aa12.89□□□□□ -0.35
LMNA-216ENST00000496738 PDE6DO43924 150 aa12.89□□□□□ -0.35
LMNA-216ENST00000496738 NDUFB4O95168 129 aa12.89□□□□□ -0.35
LMNA-216ENST00000496738 RPL7P18124 248 aaKnown RBP12.89□□□□□ -0.35
LMNA-216ENST00000496738 GPHB5Q86YW7 130 aa12.89□□□□□ -0.35
LMNA-216ENST00000496738 TVP23CQ96ET8 276 aa12.89□□□□□ -0.35
LMNA-216ENST00000496738 TRBV19A0A075B6N1 114 aa12.88□□□□□ -0.35
LMNA-216ENST00000496738 PROK1P58294 105 aa12.88□□□□□ -0.35
LMNA-216ENST00000496738 GNG5P63218 68 aa12.88□□□□□ -0.35
LMNA-216ENST00000496738 TEX43Q6ZNM6 134 aa12.88□□□□□ -0.35
LMNA-216ENST00000496738 SMIM7Q9BQ49 75 aa12.88□□□□□ -0.35
LMNA-216ENST00000496738 PARLQ9H300 379 aa12.88□□□□□ -0.35
LMNA-216ENST00000496738 Q9H3A6 140 aa12.88□□□□□ -0.35
LMNA-216ENST00000496738 DAZ1Q9NQZ3 744 aaKnown RBP12.88□□□□□ -0.35
LMNA-216ENST00000496738 U3KQE9 123 aa12.88□□□□□ -0.35
LMNA-216ENST00000496738 PGPA6NDG6 321 aa12.88□□□□□ -0.35
LMNA-216ENST00000496738 B4DEV8 164 aa12.88□□□□□ -0.35
LMNA-216ENST00000496738 ARL2-SNX15V9GYD0 113 aa12.88□□□□□ -0.35
LMNA-216ENST00000496738 SRD5A3Q9H8P0 318 aa12.87□□□□□ -0.35
LMNA-216ENST00000496738 ZNF785A8K8V0 405 aa12.87□□□□□ -0.35
LMNA-216ENST00000496738 IGFL4Q6B9Z1 124 aa12.87□□□□□ -0.35
LMNA-216ENST00000496738 OR1N2Q8NGR9 330 aa12.87□□□□□ -0.35
LMNA-216ENST00000496738 LINC01619G3V211 115 aa12.86□□□□□ -0.35
LMNA-216ENST00000496738 SLC25A5P05141 298 aaKnown RBP12.86□□□□□ -0.35
LMNA-216ENST00000496738 TMEM183BQ1AE95 376 aa12.86□□□□□ -0.35
LMNA-216ENST00000496738 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.86□□□□□ -0.35
LMNA-216ENST00000496738 DPF1Q92782 380 aa12.86□□□□□ -0.35
LMNA-216ENST00000496738 TXNDC17Q9BRA2 123 aa12.86□□□□□ -0.35
LMNA-216ENST00000496738 IGHV7-4-1A0A0J9YVY3 117 aa12.86□□□□□ -0.35
LMNA-216ENST00000496738 ZNF705FA8MVS1 300 aaPredicted RBP12.86□□□□□ -0.35
LMNA-216ENST00000496738 ZNF705DP0CH99 300 aaPredicted RBP12.86□□□□□ -0.35
LMNA-216ENST00000496738 ZNF705BP0CI00 300 aaPredicted RBP12.86□□□□□ -0.35
LMNA-216ENST00000496738 MYCNOSP40205 109 aa12.86□□□□□ -0.35
LMNA-216ENST00000496738 RHPN1-AS1Q9BWJ2 59 aa12.86□□□□□ -0.35
LMNA-216ENST00000496738 J3KRW8 73 aa12.85□□□□□ -0.35
LMNA-216ENST00000496738 KRTAP10-3P60369 221 aa12.85□□□□□ -0.35
LMNA-216ENST00000496738 TDRG1Q3Y452 100 aa12.85□□□□□ -0.35
LMNA-216ENST00000496738 TCF24Q7RTU0 167 aa12.85□□□□□ -0.35
LMNA-216ENST00000496738 UFC1Q9Y3C8 167 aa12.85□□□□□ -0.35
LMNA-216ENST00000496738 SETD2Q9BYW2 2564 aaPredicted RBP12.84□□□□□ -0.35
LMNA-216ENST00000496738 IGKV3-7A0A075B6H7 116 aa12.84□□□□□ -0.35
LMNA-216ENST00000496738 TMEM213A2RRL7 107 aa12.84□□□□□ -0.35
LMNA-216ENST00000496738 GALR1P47211 349 aa12.84□□□□□ -0.35
LMNA-216ENST00000496738 SIGLEC15Q6ZMC9 328 aa12.84□□□□□ -0.35
LMNA-216ENST00000496738 GLMPQ8WWB7 406 aa12.84□□□□□ -0.35
LMNA-216ENST00000496738 RAX2Q96IS3 184 aa12.84□□□□□ -0.35
LMNA-216ENST00000496738 LINC00479Q96M42 142 aa12.84□□□□□ -0.35
LMNA-216ENST00000496738 SDF2L1Q9HCN8 221 aa12.84□□□□□ -0.35
LMNA-216ENST00000496738 TSSC4Q9Y5U2 329 aaPredicted RBP12.84□□□□□ -0.35
LMNA-216ENST00000496738 NAT8Q9UHE5 227 aa12.84□□□□□ -0.35
LMNA-216ENST00000496738 A0A1B0GV72 72 aa12.83□□□□□ -0.35
LMNA-216ENST00000496738 PGPEP1LA6NFU8 196 aa12.83□□□□□ -0.35
LMNA-216ENST00000496738 CHEK1O14757 476 aa12.83□□□□□ -0.35
LMNA-216ENST00000496738 HLA-DMBP28068 263 aa12.83□□□□□ -0.35
LMNA-216ENST00000496738 RPL11P62913 178 aaKnown RBP12.83□□□□□ -0.35
LMNA-216ENST00000496738 PRR27Q6MZM9 219 aa12.83□□□□□ -0.35
LMNA-216ENST00000496738 SGK494Q96LW2 274 aa12.83□□□□□ -0.35
LMNA-216ENST00000496738 PNRC1Q12796 327 aaPredicted RBP12.83□□□□□ -0.36
LMNA-216ENST00000496738 KLF5Q13887 457 aaPredicted RBP12.83□□□□□ -0.36
LMNA-216ENST00000496738 NSUN5P1Q3KNT7 163 aa12.83□□□□□ -0.36
LMNA-216ENST00000496738 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.83□□□□□ -0.36
LMNA-216ENST00000496738 C11orf52Q96A22 123 aa12.83□□□□□ -0.36
LMNA-216ENST00000496738 GRAMD2BQ96HH9 432 aa12.83□□□□□ -0.36
LMNA-216ENST00000496738 GPR82Q96P67 336 aa12.83□□□□□ -0.36
LMNA-216ENST00000496738 OTORQ9NRC9 128 aa12.83□□□□□ -0.36
LMNA-216ENST00000496738 K7EMT4 169 aa12.82□□□□□ -0.36
LMNA-216ENST00000496738 M0R3E3 92 aa12.82□□□□□ -0.36
LMNA-216ENST00000496738 PEX7O00628 323 aa12.82□□□□□ -0.36
LMNA-216ENST00000496738 RIPPLY3P57055 190 aa12.82□□□□□ -0.36
LMNA-216ENST00000496738 ADIRFQ15847 76 aa12.82□□□□□ -0.36
LMNA-216ENST00000496738 DLX4Q92988 240 aaPredicted RBP12.82□□□□□ -0.36
LMNA-216ENST00000496738 EPDR1Q9UM22 224 aa12.82□□□□□ -0.36
LMNA-216ENST00000496738 LAMTOR2Q9Y2Q5 125 aa12.82□□□□□ -0.36
LMNA-216ENST00000496738 TRAV34A0A0B4J273 112 aa12.82□□□□□ -0.36
LMNA-216ENST00000496738 A0A1W2PS18 150 aa12.82□□□□□ -0.36
LMNA-216ENST00000496738 SLAQ13239 276 aa12.82□□□□□ -0.36
LMNA-216ENST00000496738 RNF182Q8N6D2 247 aa12.82□□□□□ -0.36
LMNA-216ENST00000496738 TRBV20OR9-2A0A075B6H5 130 aa12.81□□□□□ -0.36
LMNA-216ENST00000496738 LGALS9O00182 355 aa12.81□□□□□ -0.36
LMNA-216ENST00000496738 C5orf17Q8NAS9 161 aa12.81□□□□□ -0.36
LMNA-216ENST00000496738 CMTM2Q8TAZ6 248 aa12.81□□□□□ -0.36
LMNA-216ENST00000496738 C2CD3Q4AC94 2353 aa12.81□□□□□ -0.36
LMNA-216ENST00000496738 PDE6HQ13956 83 aa12.81□□□□□ -0.36
LMNA-216ENST00000496738 VAMP8Q9BV40 100 aa12.81□□□□□ -0.36
LMNA-216ENST00000496738 AAMDCQ9H7C9 122 aa12.81□□□□□ -0.36
LMNA-216ENST00000496738 PAM16Q9Y3D7 125 aa12.81□□□□□ -0.36
LMNA-216ENST00000496738 TEP1Q99973 2627 aaKnown RBP12.81□□□□□ -0.36
LMNA-216ENST00000496738 A0A087X0K7 114 aa12.8□□□□□ -0.36
LMNA-216ENST00000496738 PYGO2Q9BRQ0 406 aa12.8□□□□□ -0.36
LMNA-216ENST00000496738 ZNF331Q9NQX6 463 aaPredicted RBP12.8□□□□□ -0.36
LMNA-216ENST00000496738 HELTA6NFD8 242 aa12.8□□□□□ -0.36
LMNA-216ENST00000496738 C2orf70A6NJV1 201 aa12.8□□□□□ -0.36
LMNA-216ENST00000496738 CCL24O00175 119 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms