RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 FXYD7P58549 80 aa10.3□□□□□ -0.76
CXCL12-208ENST00000496375 PSG9Q00887 426 aa10.3□□□□□ -0.76
CXCL12-208ENST00000496375 UQCC3Q6UW78 93 aa10.3□□□□□ -0.76
CXCL12-208ENST00000496375 ZNF705AQ6ZN79 300 aaPredicted RBP10.3□□□□□ -0.76
CXCL12-208ENST00000496375 PQLC2Q6ZP29 291 aa10.3□□□□□ -0.76
CXCL12-208ENST00000496375 ZNF738Q8NE65 137 aa10.3□□□□□ -0.76
CXCL12-208ENST00000496375 OR8A1Q8NGG7 326 aa10.3□□□□□ -0.76
CXCL12-208ENST00000496375 NEU1Q99519 415 aa10.3□□□□□ -0.76
CXCL12-208ENST00000496375 PAXXQ9BUH6 204 aa10.3□□□□□ -0.76
CXCL12-208ENST00000496375 PRELID1Q9Y255 219 aa10.3□□□□□ -0.76
CXCL12-208ENST00000496375 DNAH11Q96DT5 4516 aa10.29□□□□□ -0.76
CXCL12-208ENST00000496375 ZNF705FA8MVS1 300 aaPredicted RBP10.29□□□□□ -0.76
CXCL12-208ENST00000496375 TEX46H3BTG2 121 aa10.29□□□□□ -0.76
CXCL12-208ENST00000496375 H3BTX0 84 aa10.29□□□□□ -0.76
CXCL12-208ENST00000496375 ZNF705DP0CH99 300 aaPredicted RBP10.29□□□□□ -0.76
CXCL12-208ENST00000496375 ZNF705BP0CI00 300 aaPredicted RBP10.29□□□□□ -0.76
CXCL12-208ENST00000496375 STAG3L2P0CL84 134 aa10.29□□□□□ -0.76
CXCL12-208ENST00000496375 STAG3L3P0CL85 134 aa10.29□□□□□ -0.76
CXCL12-208ENST00000496375 CDC34P49427 236 aaPredicted RBP10.29□□□□□ -0.76
CXCL12-208ENST00000496375 CNN1P51911 297 aaKnown RBP10.29□□□□□ -0.76
CXCL12-208ENST00000496375 LYPD1Q8N2G4 141 aa10.29□□□□□ -0.76
CXCL12-208ENST00000496375 SUN5Q8TC36 379 aa10.29□□□□□ -0.76
CXCL12-208ENST00000496375 RPUSD4Q96CM3 377 aaKnown RBP10.29□□□□□ -0.76
CXCL12-208ENST00000496375 NDUFAF3Q9BU61 184 aa10.29□□□□□ -0.76
CXCL12-208ENST00000496375 IGHV3OR16-12A0A075B7B8 117 aa10.28□□□□□ -0.76
CXCL12-208ENST00000496375 A0A1W2PPV4 95 aa10.28□□□□□ -0.76
CXCL12-208ENST00000496375 OR7C2O60412 319 aa10.28□□□□□ -0.76
CXCL12-208ENST00000496375 SNRPCP09234 159 aaKnown RBP10.28□□□□□ -0.76
CXCL12-208ENST00000496375 SPART-AS1P0CW21 52 aa10.28□□□□□ -0.76
CXCL12-208ENST00000496375 EMP1P54849 157 aa10.28□□□□□ -0.76
CXCL12-208ENST00000496375 UBE2L3P68036 154 aaKnown RBP10.28□□□□□ -0.76
CXCL12-208ENST00000496375 BLOC1S1P78537 153 aa10.28□□□□□ -0.76
CXCL12-208ENST00000496375 FAM74A1Q5RGS3 127 aa10.28□□□□□ -0.76
CXCL12-208ENST00000496375 FAM122CQ6P4D5 195 aa10.28□□□□□ -0.76
CXCL12-208ENST00000496375 OR4B1Q8NGF8 309 aa10.28□□□□□ -0.76
CXCL12-208ENST00000496375 PKD1P98161 4303 aa10.28□□□□□ -0.76
CXCL12-208ENST00000496375 TMEM189A5PLL7 270 aa10.27□□□□□ -0.77
CXCL12-208ENST00000496375 SMIM9A6NGZ8 99 aa10.27□□□□□ -0.77
CXCL12-208ENST00000496375 OR10J4P0C629 311 aa10.27□□□□□ -0.77
CXCL12-208ENST00000496375 P0DMU3 169 aa10.27□□□□□ -0.77
CXCL12-208ENST00000496375 FAM231AP0DMU4 169 aa10.27□□□□□ -0.77
CXCL12-208ENST00000496375 FAM231CP0DMU5 169 aa10.27□□□□□ -0.77
CXCL12-208ENST00000496375 LINC00336Q6ZUF6 198 aa10.27□□□□□ -0.77
CXCL12-208ENST00000496375 POM121L12Q8N7R1 296 aa10.27□□□□□ -0.77
CXCL12-208ENST00000496375 TMED6Q8WW62 240 aa10.27□□□□□ -0.77
CXCL12-208ENST00000496375 RAB24Q969Q5 203 aa10.27□□□□□ -0.77
CXCL12-208ENST00000496375 ODF3Q96PU9 254 aa10.27□□□□□ -0.77
CXCL12-208ENST00000496375 SLC35B3Q9H1N7 401 aa10.27□□□□□ -0.77
CXCL12-208ENST00000496375 RYR1P21817 5038 aa10.27□□□□□ -0.77
CXCL12-208ENST00000496375 PRAC2D3DTV9 90 aa10.26□□□□□ -0.77
CXCL12-208ENST00000496375 NPIPB6E9PJ23 425 aa10.26□□□□□ -0.77
CXCL12-208ENST00000496375 SEC11BP0C7V7 166 aa10.26□□□□□ -0.77
CXCL12-208ENST00000496375 SULT1A2P50226 295 aa10.26□□□□□ -0.77
CXCL12-208ENST00000496375 ARL6IP6Q8N6S5 226 aa10.26□□□□□ -0.77
CXCL12-208ENST00000496375 BLNKQ8WV28 456 aa10.26□□□□□ -0.77
CXCL12-208ENST00000496375 ACTR3CQ9C0K3 210 aaPredicted RBP10.26□□□□□ -0.77
CXCL12-208ENST00000496375 AAMDCQ9H7C9 122 aa10.26□□□□□ -0.77
CXCL12-208ENST00000496375 CTXND1A0A1B0GTU2 59 aa10.25□□□□□ -0.77
CXCL12-208ENST00000496375 M0R3E3 92 aa10.25□□□□□ -0.77
CXCL12-208ENST00000496375 ARL14EPLP0DKL9 152 aa10.25□□□□□ -0.77
CXCL12-208ENST00000496375 RAB5CP51148 216 aa10.25□□□□□ -0.77
CXCL12-208ENST00000496375 HIST1H1AQ02539 215 aaPredicted RBP10.25□□□□□ -0.77
CXCL12-208ENST00000496375 ZNF726P1Q15940 193 aa10.25□□□□□ -0.77
CXCL12-208ENST00000496375 GOLT1BQ9Y3E0 138 aa10.25□□□□□ -0.77
CXCL12-208ENST00000496375 CRXO43186 299 aaPredicted RBP10.24□□□□□ -0.77
CXCL12-208ENST00000496375 ICAM4Q14773 271 aa10.24□□□□□ -0.77
CXCL12-208ENST00000496375 AKR1C8PQ5T2L2 129 aa10.24□□□□□ -0.77
CXCL12-208ENST00000496375 FAM222AQ5U5X8 452 aa10.24□□□□□ -0.77
CXCL12-208ENST00000496375 SSX7Q7RTT5 188 aa10.24□□□□□ -0.77
CXCL12-208ENST00000496375 EXOC3-AS1Q8N2X6 119 aa10.24□□□□□ -0.77
CXCL12-208ENST00000496375 OR10J6PQ8NGY7 276 aa10.24□□□□□ -0.77
CXCL12-208ENST00000496375 IGF2BP2-AS1Q96M15 143 aa10.24□□□□□ -0.77
CXCL12-208ENST00000496375 NIPSNAP3BQ9BS92 247 aa10.24□□□□□ -0.77
CXCL12-208ENST00000496375 DKK2Q9UBU2 259 aa10.24□□□□□ -0.77
CXCL12-208ENST00000496375 TEX48A0A1B0GUV7 120 aa10.23□□□□□ -0.77
CXCL12-208ENST00000496375 RBAKDNA6NC62 111 aa10.23□□□□□ -0.77
CXCL12-208ENST00000496375 UMAD1C9J7I0 102 aa10.23□□□□□ -0.77
CXCL12-208ENST00000496375 M0R2N4 97 aa10.23□□□□□ -0.77
CXCL12-208ENST00000496375 EIF3GO75821 320 aaKnown RBP eCLIP10.23□□□□□ -0.77
CXCL12-208ENST00000496375 CXorf1O96002 111 aa10.23□□□□□ -0.77
CXCL12-208ENST00000496375 HBE1P02100 147 aa10.23□□□□□ -0.77
CXCL12-208ENST00000496375 GCHFRP30047 84 aa10.23□□□□□ -0.77
CXCL12-208ENST00000496375 C9orf47Q6ZRZ4 202 aa10.23□□□□□ -0.77
CXCL12-208ENST00000496375 C1orf158Q8N1D5 194 aa10.23□□□□□ -0.77
CXCL12-208ENST00000496375 FAM19A4Q96LR4 140 aa10.23□□□□□ -0.77
CXCL12-208ENST00000496375 Q9H3A6 140 aa10.23□□□□□ -0.77
CXCL12-208ENST00000496375 OTORQ9NRC9 128 aa10.23□□□□□ -0.77
CXCL12-208ENST00000496375 PLA2G2EQ9NZK7 142 aa10.23□□□□□ -0.77
CXCL12-208ENST00000496375 LOC102723971A0A1B0GUV8 181 aa10.22□□□□□ -0.77
CXCL12-208ENST00000496375 HMGB3O15347 200 aaKnown RBP10.22□□□□□ -0.77
CXCL12-208ENST00000496375 SLC25A5P05141 298 aaKnown RBP10.22□□□□□ -0.77
CXCL12-208ENST00000496375 HTN3P15516 51 aa10.22□□□□□ -0.77
CXCL12-208ENST00000496375 RANP62826 216 aaKnown RBP10.22□□□□□ -0.77
CXCL12-208ENST00000496375 FAM210BQ96KR6 192 aa10.22□□□□□ -0.77
CXCL12-208ENST00000496375 TMEM167BQ9NRX6 74 aa10.22□□□□□ -0.77
CXCL12-208ENST00000496375 TRBV7-9A0A0J9YWB2 115 aa10.21□□□□□ -0.77
CXCL12-208ENST00000496375 A0A1B0GVY2 172 aa10.21□□□□□ -0.77
CXCL12-208ENST00000496375 M0R2Z0 102 aa10.21□□□□□ -0.77
CXCL12-208ENST00000496375 CDKN1BP46527 198 aa10.21□□□□□ -0.77
CXCL12-208ENST00000496375 SPINK13Q1W4C9 94 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms