RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 TRAV8-2A0A0B4J237 113 aa3.72□□□□□ -1.81
PRKD3-210ENST00000494667 IGHV1OR15-9A0A0B4J2B8 117 aa3.72□□□□□ -1.81
PRKD3-210ENST00000494667 IGHV3-33P01772 117 aa3.72□□□□□ -1.81
PRKD3-210ENST00000494667 CECR9P0C854 216 aa3.72□□□□□ -1.81
PRKD3-210ENST00000494667 CD59P13987 128 aa3.72□□□□□ -1.81
PRKD3-210ENST00000494667 ORMDL2Q53FV1 153 aa3.72□□□□□ -1.81
PRKD3-210ENST00000494667 Q6ZQT7 251 aa3.72□□□□□ -1.81
PRKD3-210ENST00000494667 C1orf162Q8NEQ5 155 aaPredicted RBP3.72□□□□□ -1.81
PRKD3-210ENST00000494667 KLF14Q8TD94 323 aaPredicted RBP3.72□□□□□ -1.81
PRKD3-210ENST00000494667 DCTN5Q9BTE1 182 aa3.72□□□□□ -1.81
PRKD3-210ENST00000494667 AGPAT4-IT1Q9H0P7 198 aa3.72□□□□□ -1.81
PRKD3-210ENST00000494667 TRAV2A0A0B4J234 112 aa3.71□□□□□ -1.81
PRKD3-210ENST00000494667 IGHV1-69DA0A0B4J2H0 117 aa3.71□□□□□ -1.81
PRKD3-210ENST00000494667 RBAKDNA6NC62 111 aa3.71□□□□□ -1.81
PRKD3-210ENST00000494667 C9JAW5 83 aa3.71□□□□□ -1.81
PRKD3-210ENST00000494667 NPFFO15130 113 aa3.71□□□□□ -1.81
PRKD3-210ENST00000494667 IGKV3-15P01624 115 aa3.71□□□□□ -1.81
PRKD3-210ENST00000494667 RFPL3SP0C7P2 107 aa3.71□□□□□ -1.81
PRKD3-210ENST00000494667 PF4V1P10720 104 aa3.71□□□□□ -1.81
PRKD3-210ENST00000494667 IL11RAQ14626 422 aa3.71□□□□□ -1.81
PRKD3-210ENST00000494667 DEFB133Q30KQ1 61 aa3.71□□□□□ -1.81
PRKD3-210ENST00000494667 LINC01620Q4KN68 170 aa3.71□□□□□ -1.81
PRKD3-210ENST00000494667 C5orf38Q86SI9 138 aa3.71□□□□□ -1.81
PRKD3-210ENST00000494667 TMEM101Q96IK0 257 aa3.71□□□□□ -1.81
PRKD3-210ENST00000494667 PRADC1Q9BSG0 188 aa3.71□□□□□ -1.81
PRKD3-210ENST00000494667 AAMDCQ9H7C9 122 aa3.71□□□□□ -1.81
PRKD3-210ENST00000494667 TMEM160Q9NX00 188 aa3.71□□□□□ -1.81
PRKD3-210ENST00000494667 M0R381 172 aa3.71□□□□□ -1.82
PRKD3-210ENST00000494667 IGKV1-16P04430 117 aa3.71□□□□□ -1.82
PRKD3-210ENST00000494667 LINC00694P0DN24 101 aa3.71□□□□□ -1.82
PRKD3-210ENST00000494667 ALKBH6Q3KRA9 238 aa3.71□□□□□ -1.82
PRKD3-210ENST00000494667 H3BMM0 161 aa3.71□□□□□ -1.82
PRKD3-210ENST00000494667 K7ENP7 123 aa3.71□□□□□ -1.82
PRKD3-210ENST00000494667 GRPP07492 148 aa3.71□□□□□ -1.82
PRKD3-210ENST00000494667 FOXC1Q12948 553 aa3.71□□□□□ -1.82
PRKD3-210ENST00000494667 COL27A1Q8IZC6 1860 aaPredicted RBP3.71□□□□□ -1.82
PRKD3-210ENST00000494667 UBE2WQ96B02 151 aa3.71□□□□□ -1.82
PRKD3-210ENST00000494667 AGRNO00468 2067 aa3.71□□□□□ -1.82
PRKD3-210ENST00000494667 C11orf86A6NJI1 115 aa3.71□□□□□ -1.82
PRKD3-210ENST00000494667 E7EUB6 86 aa3.71□□□□□ -1.82
PRKD3-210ENST00000494667 IGLV1-44P01699 117 aa3.71□□□□□ -1.82
PRKD3-210ENST00000494667 FAM19A5Q7Z5A7 132 aaPredicted RBP3.71□□□□□ -1.82
PRKD3-210ENST00000494667 C2orf48Q96LS8 159 aa3.71□□□□□ -1.82
PRKD3-210ENST00000494667 SGK494Q96LW2 274 aa3.71□□□□□ -1.82
PRKD3-210ENST00000494667 TPSG1Q9NRR2 321 aa3.71□□□□□ -1.82
PRKD3-210ENST00000494667 PLAUP00749 431 aa3.7□□□□□ -1.82
PRKD3-210ENST00000494667 EGR2P11161 476 aaPredicted RBP3.7□□□□□ -1.82
PRKD3-210ENST00000494667 C3orf36Q3SXR2 165 aa3.7□□□□□ -1.82
PRKD3-210ENST00000494667 TIMM8BQ9Y5J9 83 aaPredicted RBP3.7□□□□□ -1.82
PRKD3-210ENST00000494667 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.7□□□□□ -1.82
PRKD3-210ENST00000494667 LOC107984156A0A0G2JMH3 177 aa3.7□□□□□ -1.82
PRKD3-210ENST00000494667 EPM2AB3EWF7 344 aa3.7□□□□□ -1.82
PRKD3-210ENST00000494667 SMKR1H3BMG3 65 aa3.7□□□□□ -1.82
PRKD3-210ENST00000494667 EIF4EBP3O60516 100 aaPredicted RBP3.7□□□□□ -1.82
PRKD3-210ENST00000494667 ZNF826PQ6ZT77 177 aa3.7□□□□□ -1.82
PRKD3-210ENST00000494667 ARL17AQ8IVW1 177 aa3.7□□□□□ -1.82
PRKD3-210ENST00000494667 EXOC3-AS1Q8N2X6 119 aa3.7□□□□□ -1.82
PRKD3-210ENST00000494667 ZNF296Q8WUU4 475 aaPredicted RBP3.7□□□□□ -1.82
PRKD3-210ENST00000494667 FLYWCH2Q96CP2 140 aaKnown RBP3.7□□□□□ -1.82
PRKD3-210ENST00000494667 C8orf49Q96NF6 230 aa3.7□□□□□ -1.82
PRKD3-210ENST00000494667 FAM173AQ9BQD7 235 aa3.7□□□□□ -1.82
PRKD3-210ENST00000494667 FSCN3Q9NQT6 498 aa3.7□□□□□ -1.82
PRKD3-210ENST00000494667 A0A0G2JNJ9 132 aa3.7□□□□□ -1.82
PRKD3-210ENST00000494667 ZNF815PA8K554 130 aa3.7□□□□□ -1.82
PRKD3-210ENST00000494667 I3L2K1 104 aa3.7□□□□□ -1.82
PRKD3-210ENST00000494667 IGFBPL1Q8WX77 278 aa3.7□□□□□ -1.82
PRKD3-210ENST00000494667 PLEKHB2Q96CS7 222 aa3.7□□□□□ -1.82
PRKD3-210ENST00000494667 SMIM2Q9BVW6 85 aa3.7□□□□□ -1.82
PRKD3-210ENST00000494667 Q9UFV3 132 aa3.7□□□□□ -1.82
PRKD3-210ENST00000494667 IGHV5-10-1A0A0J9YXX1 117 aa3.69□□□□□ -1.82
PRKD3-210ENST00000494667 SDHAF1A6NFY7 115 aa3.69□□□□□ -1.82
PRKD3-210ENST00000494667 F8WDY8 70 aa3.69□□□□□ -1.82
PRKD3-210ENST00000494667 COX7CP15954 63 aa3.69□□□□□ -1.82
PRKD3-210ENST00000494667 RPL7P18124 248 aaKnown RBP3.69□□□□□ -1.82
PRKD3-210ENST00000494667 UCNP55089 124 aa3.69□□□□□ -1.82
PRKD3-210ENST00000494667 FXYD7P58549 80 aa3.69□□□□□ -1.82
PRKD3-210ENST00000494667 TMEM258P61165 79 aa3.69□□□□□ -1.82
PRKD3-210ENST00000494667 ZNF474Q6S9Z5 364 aaPredicted RBP3.69□□□□□ -1.82
PRKD3-210ENST00000494667 NTN5Q8WTR8 489 aaPredicted RBP3.69□□□□□ -1.82
PRKD3-210ENST00000494667 ASCL2Q99929 193 aa3.69□□□□□ -1.82
PRKD3-210ENST00000494667 SLC50A1Q9BRV3 221 aa3.69□□□□□ -1.82
PRKD3-210ENST00000494667 OBP2BQ9NPH6 170 aa3.69□□□□□ -1.82
PRKD3-210ENST00000494667 IGLV4-69A0A075B6H9 119 aa3.69□□□□□ -1.82
PRKD3-210ENST00000494667 LY6G6EA0A0G2JKS1 128 aa3.69□□□□□ -1.82
PRKD3-210ENST00000494667 A4D1N5 150 aa3.69□□□□□ -1.82
PRKD3-210ENST00000494667 PINLYPA6NC86 204 aa3.69□□□□□ -1.82
PRKD3-210ENST00000494667 C17orf100A8MU93 164 aa3.69□□□□□ -1.82
PRKD3-210ENST00000494667 OVOL1O14753 267 aa3.69□□□□□ -1.82
PRKD3-210ENST00000494667 EFNA4P52798 201 aa3.69□□□□□ -1.82
PRKD3-210ENST00000494667 HERVK_113P63121 156 aa3.69□□□□□ -1.82
PRKD3-210ENST00000494667 RUSC1-AS1Q66K80 236 aa3.69□□□□□ -1.82
PRKD3-210ENST00000494667 U3KQA8 63 aa3.69□□□□□ -1.82
PRKD3-210ENST00000494667 RNF223E7ERA6 249 aa3.69□□□□□ -1.82
PRKD3-210ENST00000494667 IGHV3-9P01782 118 aa3.69□□□□□ -1.82
PRKD3-210ENST00000494667 EDDM3AQ14507 147 aa3.69□□□□□ -1.82
PRKD3-210ENST00000494667 LINC00643Q86TS7 51 aa3.69□□□□□ -1.82
PRKD3-210ENST00000494667 SLC25A45Q8N413 288 aa3.69□□□□□ -1.82
PRKD3-210ENST00000494667 KIR2DL5BQ8NHK3 375 aa3.69□□□□□ -1.82
PRKD3-210ENST00000494667 ELANEP08246 267 aa3.68□□□□□ -1.82
PRKD3-210ENST00000494667 MED14OSP0DP75 135 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms