RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 BSXQ3C1V8 233 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 PYDC2Q56P42 97 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 NMSQ5H8A3 153 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 SPATA31B1PQ5VZV4 182 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 LPCAT3Q6P1A2 487 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 KCNIP4Q6PIL6 250 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 C2orf66Q6UXQ4 117 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 ACOT7LQ6ZUV0 252 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 CMTM1Q8IZ96 169 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 C15orf54Q8N8G6 183 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 OR1L4Q8NGR5 311 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 OR1P1Q8NH06 330 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 OR4A5Q8NH83 315 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 VSTM2AQ8TAG5 236 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 DCANP1Q8TF63 244 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 IL22RA2Q969J5 263 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 OR10C1Q96KK4 312 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 LINC00052Q96N35 136 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 RARRES2Q99969 163 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 BCL7BQ9BQE9 202 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 SRRQ9GZT4 340 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 VSIRQ9H7M9 311 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 SLC25A22Q9H936 323 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 VCX3AQ9NNX9 186 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 CCDC59Q9P031 241 aaKnown RBP1.95□□□□□ -2.1
PTCD3-218ENST00000493430 MRPL27Q9P0M9 148 aaKnown RBP1.95□□□□□ -2.1
PTCD3-218ENST00000493430 PRNDQ9UKY0 176 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 C14orf166Q9Y224 244 aaKnown RBP1.95□□□□□ -2.1
PTCD3-218ENST00000493430 KLK5Q9Y337 293 aaPredicted RBP1.95□□□□□ -2.1
PTCD3-218ENST00000493430 UFC1Q9Y3C8 167 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 FAT2Q9NYQ8 4349 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 HECTD4Q9Y4D8 3996 aa1.95□□□□□ -2.1
PTCD3-218ENST00000493430 TRAV14DV4A0A0A6YYC5 116 aa1.94□□□□□ -2.1
PTCD3-218ENST00000493430 SMIM31A0A1B0GVY4 71 aa1.94□□□□□ -2.1
PTCD3-218ENST00000493430 SMCO3A2RU48 225 aa1.94□□□□□ -2.1
PTCD3-218ENST00000493430 OR4C46A6NHA9 309 aa1.94□□□□□ -2.1
PTCD3-218ENST00000493430 ZNF705GA8MUZ8 300 aaPredicted RBP1.94□□□□□ -2.1
PTCD3-218ENST00000493430 ZNF705FA8MVS1 300 aaPredicted RBP1.94□□□□□ -2.1
PTCD3-218ENST00000493430 DISC1C4P0D8 188 aa1.94□□□□□ -2.1
PTCD3-218ENST00000493430 PANO1I0J062 215 aa1.94□□□□□ -2.1
PTCD3-218ENST00000493430 DNASE2O00115 360 aaPredicted RBP1.94□□□□□ -2.1
PTCD3-218ENST00000493430 SLC22A5O76082 557 aa1.94□□□□□ -2.1
PTCD3-218ENST00000493430 CDS2O95674 445 aa1.94□□□□□ -2.1
PTCD3-218ENST00000493430 IFNA10P01566 189 aa1.94□□□□□ -2.1
PTCD3-218ENST00000493430 METTL15P1P0C7V9 234 aa1.94□□□□□ -2.1
PTCD3-218ENST00000493430 SULT1A3P0DMM9 295 aa1.94□□□□□ -2.1
PTCD3-218ENST00000493430 SULT1A4P0DMN0 295 aa1.94□□□□□ -2.1
PTCD3-218ENST00000493430 OR10J1P30954 320 aa1.94□□□□□ -2.1
PTCD3-218ENST00000493430 SNCAP37840 140 aa1.94□□□□□ -2.1
PTCD3-218ENST00000493430 RPL13AP40429 203 aaKnown RBP1.94□□□□□ -2.1
PTCD3-218ENST00000493430 ARL6IP1Q15041 203 aa1.94□□□□□ -2.1
PTCD3-218ENST00000493430 MSMO1Q15800 293 aa1.94□□□□□ -2.1
PTCD3-218ENST00000493430 KLK9Q2XQG4 91 aa1.94□□□□□ -2.1
PTCD3-218ENST00000493430 C12orf74Q32Q52 190 aa1.94□□□□□ -2.1
PTCD3-218ENST00000493430 GCSAMLQ5JQS6 135 aa1.94□□□□□ -2.1
PTCD3-218ENST00000493430 SPANXN5Q5MJ07 72 aa1.94□□□□□ -2.1
PTCD3-218ENST00000493430 PRR9Q5T870 116 aa1.94□□□□□ -2.1
PTCD3-218ENST00000493430 PVRIGQ6DKI7 326 aa1.94□□□□□ -2.1
PTCD3-218ENST00000493430 OR8G2PQ6IF36 304 aa1.94□□□□□ -2.1
PTCD3-218ENST00000493430 KRTAP5-7Q6L8G8 165 aa1.94□□□□□ -2.1
PTCD3-218ENST00000493430 RNASEKQ6P5S7 137 aaKnown RBP1.94□□□□□ -2.1
PTCD3-218ENST00000493430 CEMP1Q6PRD7 247 aaPredicted RBP1.94□□□□□ -2.1
PTCD3-218ENST00000493430 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.94□□□□□ -2.1
PTCD3-218ENST00000493430 C1orf158Q8N1D5 194 aa1.94□□□□□ -2.1
PTCD3-218ENST00000493430 ZNF709Q8N972 641 aa1.94□□□□□ -2.1
PTCD3-218ENST00000493430 OR4B1Q8NGF8 309 aa1.94□□□□□ -2.1
PTCD3-218ENST00000493430 OR2K2Q8NGT1 345 aa1.94□□□□□ -2.1
PTCD3-218ENST00000493430 OR1S1Q8NH92 325 aa1.94□□□□□ -2.1
PTCD3-218ENST00000493430 TERB2Q8NHR7 220 aa1.94□□□□□ -2.1
PTCD3-218ENST00000493430 DTD1Q8TEA8 209 aa1.94□□□□□ -2.1
PTCD3-218ENST00000493430 RBPMSQ93062 196 aaKnown RBP1.94□□□□□ -2.1
PTCD3-218ENST00000493430 TMEM56Q96MV1 263 aa1.94□□□□□ -2.1
PTCD3-218ENST00000493430 NIPSNAP3BQ9BS92 247 aa1.94□□□□□ -2.1
PTCD3-218ENST00000493430 KLK9Q9UKQ9 250 aa1.94□□□□□ -2.1
PTCD3-218ENST00000493430 APLNQ9ULZ1 77 aa1.94□□□□□ -2.1
PTCD3-218ENST00000493430 RCL1Q9Y2P8 373 aaKnown RBP1.94□□□□□ -2.1
PTCD3-218ENST00000493430 LSM5Q9Y4Y9 91 aaKnown RBP1.94□□□□□ -2.1
PTCD3-218ENST00000493430 UBE2L5PA0A1B0GUS4 154 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 IGSF23A1L1A6 192 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 FABP12A6NFH5 140 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 FAM24AA6NFZ4 105 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 PLA2G10O15496 165 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 RS1O15537 224 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 CRXO43186 299 aaPredicted RBP1.93□□□□□ -2.1
PTCD3-218ENST00000493430 PITX3O75364 302 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 DHFRP00374 187 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 IFNA4P05014 189 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 IL7P13232 177 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 HTN1P15515 57 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 ORM2P19652 201 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 CRYBB3P26998 211 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 HTR2BP41595 481 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 APOC4P55056 127 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 SPCS3P61009 180 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 ERHP84090 104 aaKnown RBP1.93□□□□□ -2.1
PTCD3-218ENST00000493430 IFITM3Q01628 133 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 AKR1C1Q04828 323 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 SMCO1Q147U7 214 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 FAM222AQ5U5X8 452 aa1.93□□□□□ -2.1
PTCD3-218ENST00000493430 FAM78BQ5VT40 261 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms