RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 ERVFC1-1P60608 527 aa10.7□□□□□ -0.7
PDZRN3-210ENST00000492909 DLX4Q92988 240 aaPredicted RBP10.7□□□□□ -0.7
PDZRN3-210ENST00000492909 C14orf144Q96I85 54 aa10.7□□□□□ -0.7
PDZRN3-210ENST00000492909 OSTCQ9NRP0 149 aa10.7□□□□□ -0.7
PDZRN3-210ENST00000492909 PEMTQ9UBM1 199 aa10.7□□□□□ -0.7
PDZRN3-210ENST00000492909 PGPA6NDG6 321 aa10.69□□□□□ -0.7
PDZRN3-210ENST00000492909 C2orf70A6NJV1 201 aa10.69□□□□□ -0.7
PDZRN3-210ENST00000492909 ZNF253O75346 499 aa10.69□□□□□ -0.7
PDZRN3-210ENST00000492909 EDN2P20800 178 aa10.69□□□□□ -0.7
PDZRN3-210ENST00000492909 CBLN1P23435 193 aa10.69□□□□□ -0.7
PDZRN3-210ENST00000492909 OR5I1Q13606 314 aa10.69□□□□□ -0.7
PDZRN3-210ENST00000492909 NSUN5P1Q3KNT7 163 aa10.69□□□□□ -0.7
PDZRN3-210ENST00000492909 OR9G4Q8NGQ1 327 aa10.69□□□□□ -0.7
PDZRN3-210ENST00000492909 MRPL18Q9H0U6 180 aaKnown RBP10.69□□□□□ -0.7
PDZRN3-210ENST00000492909 OTORQ9NRC9 128 aa10.69□□□□□ -0.7
PDZRN3-210ENST00000492909 ZMAT5Q9UDW3 170 aaKnown RBP10.69□□□□□ -0.7
PDZRN3-210ENST00000492909 WNK1Q9H4A3 2382 aa10.68□□□□□ -0.7
PDZRN3-210ENST00000492909 M0QZ24 198 aa10.68□□□□□ -0.7
PDZRN3-210ENST00000492909 SLC25A5P05141 298 aaKnown RBP10.68□□□□□ -0.7
PDZRN3-210ENST00000492909 PSG9Q00887 426 aa10.68□□□□□ -0.7
PDZRN3-210ENST00000492909 TMEM256Q8N2U0 113 aa10.68□□□□□ -0.7
PDZRN3-210ENST00000492909 EXOC3-AS1Q8N2X6 119 aa10.68□□□□□ -0.7
PDZRN3-210ENST00000492909 C5orf17Q8NAS9 161 aa10.68□□□□□ -0.7
PDZRN3-210ENST00000492909 IGF2BP2-AS1Q96M15 143 aa10.68□□□□□ -0.7
PDZRN3-210ENST00000492909 AAMDCQ9H7C9 122 aa10.68□□□□□ -0.7
PDZRN3-210ENST00000492909 TENM1Q9UKZ4 2725 aa10.68□□□□□ -0.7
PDZRN3-210ENST00000492909 ZNF705GA8MUZ8 300 aaPredicted RBP10.67□□□□□ -0.7
PDZRN3-210ENST00000492909 ISLRO14498 428 aa10.67□□□□□ -0.7
PDZRN3-210ENST00000492909 IGLV2-8P01709 118 aa10.67□□□□□ -0.7
PDZRN3-210ENST00000492909 IQCJQ1A5X6 159 aa10.67□□□□□ -0.7
PDZRN3-210ENST00000492909 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.67□□□□□ -0.7
PDZRN3-210ENST00000492909 ZNF664Q8N3J9 261 aa10.67□□□□□ -0.7
PDZRN3-210ENST00000492909 NUPR1O60356 82 aa10.67□□□□□ -0.7
PDZRN3-210ENST00000492909 TAS2R60P59551 318 aa10.67□□□□□ -0.7
PDZRN3-210ENST00000492909 RPL11P62913 178 aaKnown RBP10.67□□□□□ -0.7
PDZRN3-210ENST00000492909 RPL19P84098 196 aaKnown RBP10.67□□□□□ -0.7
PDZRN3-210ENST00000492909 CMTM2Q8TAZ6 248 aa10.67□□□□□ -0.7
PDZRN3-210ENST00000492909 SLC50A1Q9BRV3 221 aa10.67□□□□□ -0.7
PDZRN3-210ENST00000492909 GNB1LQ9BYB4 327 aa10.67□□□□□ -0.7
PDZRN3-210ENST00000492909 ZNF331Q9NQX6 463 aaPredicted RBP10.67□□□□□ -0.7
PDZRN3-210ENST00000492909 ESDP10768 282 aa10.66□□□□□ -0.7
PDZRN3-210ENST00000492909 COX19Q49B96 90 aa10.66□□□□□ -0.7
PDZRN3-210ENST00000492909 TCF24Q7RTU0 167 aa10.66□□□□□ -0.7
PDZRN3-210ENST00000492909 TP53TG3Q9ULZ0 132 aa10.66□□□□□ -0.7
PDZRN3-210ENST00000492909 EPDR1Q9UM22 224 aa10.66□□□□□ -0.7
PDZRN3-210ENST00000492909 PEX7O00628 323 aa10.65□□□□□ -0.7
PDZRN3-210ENST00000492909 CRISP2P16562 243 aa10.65□□□□□ -0.7
PDZRN3-210ENST00000492909 RAB4BP61018 213 aa10.65□□□□□ -0.7
PDZRN3-210ENST00000492909 PAFAH1B2P68402 229 aa10.65□□□□□ -0.7
PDZRN3-210ENST00000492909 WDR73Q6P4I2 378 aa10.65□□□□□ -0.7
PDZRN3-210ENST00000492909 CITED1Q99966 193 aa10.65□□□□□ -0.7
PDZRN3-210ENST00000492909 RNASE7Q9H1E1 156 aaKnown RBP10.65□□□□□ -0.7
PDZRN3-210ENST00000492909 NRN1Q9NPD7 142 aa10.65□□□□□ -0.7
PDZRN3-210ENST00000492909 GRIFINA4D1Z8 144 aa10.65□□□□□ -0.71
PDZRN3-210ENST00000492909 SNURFLB1AK76 121 aa10.65□□□□□ -0.71
PDZRN3-210ENST00000492909 OVOL1O14753 267 aa10.65□□□□□ -0.71
PDZRN3-210ENST00000492909 MT-ND6P03923 174 aa10.65□□□□□ -0.71
PDZRN3-210ENST00000492909 GNG5P63218 68 aa10.65□□□□□ -0.71
PDZRN3-210ENST00000492909 Q0VG73 95 aa10.65□□□□□ -0.71
PDZRN3-210ENST00000492909 C12orf54Q6X4T0 127 aa10.65□□□□□ -0.71
PDZRN3-210ENST00000492909 ATG101Q9BSB4 218 aa10.65□□□□□ -0.71
PDZRN3-210ENST00000492909 RPH3ALQ9UNE2 315 aa10.65□□□□□ -0.71
PDZRN3-210ENST00000492909 STAB1Q9NY15 2570 aa10.64□□□□□ -0.71
PDZRN3-210ENST00000492909 IGKV3-7A0A075B6H7 116 aa10.64□□□□□ -0.71
PDZRN3-210ENST00000492909 SMIM27A0A1W2PRY6 76 aa10.64□□□□□ -0.71
PDZRN3-210ENST00000492909 TCRAP04437 139 aa10.64□□□□□ -0.71
PDZRN3-210ENST00000492909 CSN3P07498 182 aa10.64□□□□□ -0.71
PDZRN3-210ENST00000492909 IBA57Q5T440 356 aaKnown RBP10.64□□□□□ -0.71
PDZRN3-210ENST00000492909 ADAMTSL5Q6ZMM2 481 aa10.64□□□□□ -0.71
PDZRN3-210ENST00000492909 SELENOKQ9Y6D0 94 aa10.64□□□□□ -0.71
PDZRN3-210ENST00000492909 M0R3E3 92 aa10.63□□□□□ -0.71
PDZRN3-210ENST00000492909 FRMD6-AS1P0C7T7 363 aa10.63□□□□□ -0.71
PDZRN3-210ENST00000492909 MGST1P10620 155 aaKnown RBP10.63□□□□□ -0.71
PDZRN3-210ENST00000492909 CSN1S1P47710 185 aa10.63□□□□□ -0.71
PDZRN3-210ENST00000492909 LINC00310P59036 64 aa10.63□□□□□ -0.71
PDZRN3-210ENST00000492909 IGFL4Q6B9Z1 124 aa10.63□□□□□ -0.71
PDZRN3-210ENST00000492909 ARL6IP6Q8N6S5 226 aa10.63□□□□□ -0.71
PDZRN3-210ENST00000492909 C16orf92Q96LL3 132 aa10.63□□□□□ -0.71
PDZRN3-210ENST00000492909 CLEC5AQ9NY25 188 aa10.63□□□□□ -0.71
PDZRN3-210ENST00000492909 NAGKQ9UJ70 344 aa10.63□□□□□ -0.71
PDZRN3-210ENST00000492909 SCGB1D1O95968 90 aa10.62□□□□□ -0.71
PDZRN3-210ENST00000492909 PF4P02776 101 aa10.62□□□□□ -0.71
PDZRN3-210ENST00000492909 TMEM136Q6ZRR5 245 aa10.62□□□□□ -0.71
PDZRN3-210ENST00000492909 FAM231DQ6ZW35 169 aa10.62□□□□□ -0.71
PDZRN3-210ENST00000492909 LINC00469Q8N7U9 141 aa10.62□□□□□ -0.71
PDZRN3-210ENST00000492909 C3orf56Q8N813 242 aa10.62□□□□□ -0.71
PDZRN3-210ENST00000492909 DYNLRB2Q8TF09 96 aa10.62□□□□□ -0.71
PDZRN3-210ENST00000492909 NDUFAF3Q9BU61 184 aa10.62□□□□□ -0.71
PDZRN3-210ENST00000492909 TRAV8-2A0A0B4J237 113 aa10.62□□□□□ -0.71
PDZRN3-210ENST00000492909 K7EQM0 130 aa10.62□□□□□ -0.71
PDZRN3-210ENST00000492909 SOCS3O14543 225 aa10.62□□□□□ -0.71
PDZRN3-210ENST00000492909 SERF1AO75920 110 aa10.62□□□□□ -0.71
PDZRN3-210ENST00000492909 HLA-DMBP28068 263 aa10.62□□□□□ -0.71
PDZRN3-210ENST00000492909 SAMD13Q5VXD3 122 aa10.62□□□□□ -0.71
PDZRN3-210ENST00000492909 GOLT1AQ6ZVE7 132 aa10.62□□□□□ -0.71
PDZRN3-210ENST00000492909 RNF182Q8N6D2 247 aa10.62□□□□□ -0.71
PDZRN3-210ENST00000492909 IZUMO1RA6ND01 250 aa10.61□□□□□ -0.71
PDZRN3-210ENST00000492909 DIRC3C9JPN6 131 aa10.61□□□□□ -0.71
PDZRN3-210ENST00000492909 UBE2G1P62253 170 aa10.61□□□□□ -0.71
PDZRN3-210ENST00000492909 DCANP1Q8TF63 244 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms