RNA–Protein interactions for RNA: ENST00000492819.1

CCDC12-206, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-206ENST00000492819 BLNKQ8WV28 456 aa11.94□□□□□ -0.5
CCDC12-206ENST00000492819 ARPC5LQ9BPX5 153 aa11.94□□□□□ -0.5
CCDC12-206ENST00000492819 SLC35B3Q9H1N7 401 aa11.94□□□□□ -0.5
CCDC12-206ENST00000492819 hCG_2014768A0A024R1R8 64 aa11.93□□□□□ -0.5
CCDC12-206ENST00000492819 A0A1B0GVG6 124 aa11.93□□□□□ -0.5
CCDC12-206ENST00000492819 A0A1W2PPV4 95 aa11.93□□□□□ -0.5
CCDC12-206ENST00000492819 OR7C2O60412 319 aa11.93□□□□□ -0.5
CCDC12-206ENST00000492819 MBP02144 154 aa11.93□□□□□ -0.5
CCDC12-206ENST00000492819 HTN3P15516 51 aa11.93□□□□□ -0.5
CCDC12-206ENST00000492819 TAS2R45P59539 299 aa11.93□□□□□ -0.5
CCDC12-206ENST00000492819 KHDC3LQ587J8 217 aa11.93□□□□□ -0.5
CCDC12-206ENST00000492819 FAM122CQ6P4D5 195 aa11.93□□□□□ -0.5
CCDC12-206ENST00000492819 MRPL53Q96EL3 112 aaKnown RBP11.93□□□□□ -0.5
CCDC12-206ENST00000492819 M0R3E3 92 aa11.92□□□□□ -0.5
CCDC12-206ENST00000492819 C1orf158Q8N1D5 194 aa11.92□□□□□ -0.5
CCDC12-206ENST00000492819 EXOC3-AS1Q8N2X6 119 aa11.92□□□□□ -0.5
CCDC12-206ENST00000492819 NIPSNAP3BQ9BS92 247 aa11.92□□□□□ -0.5
CCDC12-206ENST00000492819 TMEM189A5PLL7 270 aa11.91□□□□□ -0.5
CCDC12-206ENST00000492819 SMIM9A6NGZ8 99 aa11.91□□□□□ -0.5
CCDC12-206ENST00000492819 BCL2L11O43521 198 aa11.91□□□□□ -0.5
CCDC12-206ENST00000492819 C1QBP02746 253 aa11.91□□□□□ -0.5
CCDC12-206ENST00000492819 STAG3L2P0CL84 134 aa11.91□□□□□ -0.5
CCDC12-206ENST00000492819 STAG3L3P0CL85 134 aa11.91□□□□□ -0.5
CCDC12-206ENST00000492819 CDC34P49427 236 aaPredicted RBP11.91□□□□□ -0.5
CCDC12-206ENST00000492819 HIST1H1AQ02539 215 aaPredicted RBP11.91□□□□□ -0.5
CCDC12-206ENST00000492819 TNP2Q05952 138 aa11.91□□□□□ -0.5
CCDC12-206ENST00000492819 C1orf134Q5TEV5 83 aa11.91□□□□□ -0.5
CCDC12-206ENST00000492819 TMEM88Q6PEY1 159 aa11.91□□□□□ -0.5
CCDC12-206ENST00000492819 PQLC2Q6ZP29 291 aa11.91□□□□□ -0.5
CCDC12-206ENST00000492819 RAB24Q969Q5 203 aa11.91□□□□□ -0.5
CCDC12-206ENST00000492819 PHYHIPLQ96FC7 376 aa11.91□□□□□ -0.5
CCDC12-206ENST00000492819 FAM210BQ96KR6 192 aa11.91□□□□□ -0.5
CCDC12-206ENST00000492819 PRELID1Q9Y255 219 aa11.91□□□□□ -0.5
CCDC12-206ENST00000492819 HMGB3O15347 200 aaKnown RBP11.9□□□□□ -0.5
CCDC12-206ENST00000492819 CRXO43186 299 aaPredicted RBP11.9□□□□□ -0.5
CCDC12-206ENST00000492819 UBE2L3P68036 154 aaKnown RBP11.9□□□□□ -0.5
CCDC12-206ENST00000492819 CD300CQ08708 224 aa11.9□□□□□ -0.5
CCDC12-206ENST00000492819 ICAM4Q14773 271 aa11.9□□□□□ -0.5
CCDC12-206ENST00000492819 LGALSLQ3ZCW2 172 aaPredicted RBP11.9□□□□□ -0.5
CCDC12-206ENST00000492819 RNF212Q495C1 297 aa11.9□□□□□ -0.5
CCDC12-206ENST00000492819 TMUB2Q71RG4 321 aa11.9□□□□□ -0.5
CCDC12-206ENST00000492819 SSX7Q7RTT5 188 aa11.9□□□□□ -0.5
CCDC12-206ENST00000492819 LYPD1Q8N2G4 141 aa11.9□□□□□ -0.5
CCDC12-206ENST00000492819 SUN5Q8TC36 379 aa11.9□□□□□ -0.5
CCDC12-206ENST00000492819 HERC1Q15751 4861 aa11.9□□□□□ -0.5
CCDC12-206ENST00000492819 ZNF726P1Q15940 193 aa11.89□□□□□ -0.51
CCDC12-206ENST00000492819 AKAP14Q86UN6 197 aa11.89□□□□□ -0.51
CCDC12-206ENST00000492819 ACTR3CQ9C0K3 210 aaPredicted RBP11.89□□□□□ -0.51
CCDC12-206ENST00000492819 AAMDCQ9H7C9 122 aa11.89□□□□□ -0.51
CCDC12-206ENST00000492819 YTHDF2Q9Y5A9 579 aaKnown RBP11.89□□□□□ -0.51
CCDC12-206ENST00000492819 LOC102723971A0A1B0GUV8 181 aa11.88□□□□□ -0.51
CCDC12-206ENST00000492819 KANTRA0A1W2PQU2 76 aa11.88□□□□□ -0.51
CCDC12-206ENST00000492819 NPIPB6E9PJ23 425 aa11.88□□□□□ -0.51
CCDC12-206ENST00000492819 PRM2P04554 102 aa11.88□□□□□ -0.51
CCDC12-206ENST00000492819 ARL14EPLP0DKL9 152 aa11.88□□□□□ -0.51
CCDC12-206ENST00000492819 RANP62826 216 aaKnown RBP11.88□□□□□ -0.51
CCDC12-206ENST00000492819 SPINK13Q1W4C9 94 aa11.88□□□□□ -0.51
CCDC12-206ENST00000492819 OR10J6PQ8NGY7 276 aa11.88□□□□□ -0.51
CCDC12-206ENST00000492819 IGF2BP2-AS1Q96M15 143 aa11.88□□□□□ -0.51
CCDC12-206ENST00000492819 Q9H3A6 140 aa11.88□□□□□ -0.51
CCDC12-206ENST00000492819 BOLA2-SMG1P6H3BVE0 249 aa11.87□□□□□ -0.51
CCDC12-206ENST00000492819 M0R2Z0 102 aa11.87□□□□□ -0.51
CCDC12-206ENST00000492819 SEC11BP0C7V7 166 aa11.87□□□□□ -0.51
CCDC12-206ENST00000492819 SOHLH1Q5JUK2 328 aa11.87□□□□□ -0.51
CCDC12-206ENST00000492819 HYLS1Q96M11 299 aa11.87□□□□□ -0.51
CCDC12-206ENST00000492819 ZNF471Q9BX82 626 aaPredicted RBP11.87□□□□□ -0.51
CCDC12-206ENST00000492819 C16orf90A8MZG2 172 aa11.86□□□□□ -0.51
CCDC12-206ENST00000492819 CT45A10P0DMU9 189 aa11.86□□□□□ -0.51
CCDC12-206ENST00000492819 GCHFRP30047 84 aa11.86□□□□□ -0.51
CCDC12-206ENST00000492819 AKR1C8PQ5T2L2 129 aa11.86□□□□□ -0.51
CCDC12-206ENST00000492819 ODF3Q96PU9 254 aa11.86□□□□□ -0.51
CCDC12-206ENST00000492819 CTXND1A0A1B0GTU2 59 aa11.85□□□□□ -0.51
CCDC12-206ENST00000492819 TEX48A0A1B0GUV7 120 aa11.85□□□□□ -0.51
CCDC12-206ENST00000492819 CXorf1O96002 111 aa11.85□□□□□ -0.51
CCDC12-206ENST00000492819 HBE1P02100 147 aa11.85□□□□□ -0.51
CCDC12-206ENST00000492819 ERCC8Q13216 396 aa11.85□□□□□ -0.51
CCDC12-206ENST00000492819 C9orf47Q6ZRZ4 202 aa11.85□□□□□ -0.51
CCDC12-206ENST00000492819 BAP18Q8IXM2 172 aa11.85□□□□□ -0.51
CCDC12-206ENST00000492819 MAPKAPK5-AS1Q8N8E1 139 aa11.85□□□□□ -0.51
CCDC12-206ENST00000492819 STOML3Q8TAV4 291 aa11.85□□□□□ -0.51
CCDC12-206ENST00000492819 FAM19A4Q96LR4 140 aa11.85□□□□□ -0.51
CCDC12-206ENST00000492819 AGPAT4-IT1Q9H0P7 198 aa11.85□□□□□ -0.51
CCDC12-206ENST00000492819 OTORQ9NRC9 128 aa11.85□□□□□ -0.51
CCDC12-206ENST00000492819 TRAV12-2A0A075B6T6 113 aa11.84□□□□□ -0.51
CCDC12-206ENST00000492819 IGKV2-40A0A087WW87 121 aaPredicted RBP11.84□□□□□ -0.51
CCDC12-206ENST00000492819 PFDN1O60925 122 aa11.84□□□□□ -0.51
CCDC12-206ENST00000492819 CDK2AP2O75956 126 aa11.84□□□□□ -0.51
CCDC12-206ENST00000492819 IGKV2D-40P01614 121 aaPredicted RBP11.84□□□□□ -0.51
CCDC12-206ENST00000492819 CDKN1BP46527 198 aa11.84□□□□□ -0.51
CCDC12-206ENST00000492819 DAD1P61803 113 aa11.84□□□□□ -0.51
CCDC12-206ENST00000492819 KIR3DS1Q14943 382 aa11.84□□□□□ -0.51
CCDC12-206ENST00000492819 LINC00477Q96M19 166 aa11.84□□□□□ -0.51
CCDC12-206ENST00000492819 VGLL1Q99990 258 aa11.84□□□□□ -0.51
CCDC12-206ENST00000492819 GOLT1BQ9Y3E0 138 aa11.84□□□□□ -0.51
CCDC12-206ENST00000492819 PGPA6NDG6 321 aa11.83□□□□□ -0.52
CCDC12-206ENST00000492819 EIF5AP63241 154 aaKnown RBP11.83□□□□□ -0.52
CCDC12-206ENST00000492819 RRN3P1Q2M238 152 aa11.83□□□□□ -0.52
CCDC12-206ENST00000492819 ARL6IP6Q8N6S5 226 aa11.83□□□□□ -0.52
CCDC12-206ENST00000492819 ZNRF2Q8NHG8 242 aa11.83□□□□□ -0.52
CCDC12-206ENST00000492819 PPP1R14DQ9NXH3 145 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms