RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 ZNF124Q15973 351 aa16.39■□□□□ 0.21
PSPC1-204ENST00000492741 CENPWQ5EE01 88 aa16.39■□□□□ 0.21
PSPC1-204ENST00000492741 ACTL10Q5JWF8 245 aa16.39■□□□□ 0.21
PSPC1-204ENST00000492741 GDF5OSQ5U4N7 250 aa16.39■□□□□ 0.21
PSPC1-204ENST00000492741 BAGE2Q86Y30 109 aa16.39■□□□□ 0.21
PSPC1-204ENST00000492741 AGPAT4-IT1Q9H0P7 198 aa16.39■□□□□ 0.21
PSPC1-204ENST00000492741 SAV1Q9H4B6 383 aaPredicted RBP16.39■□□□□ 0.21
PSPC1-204ENST00000492741 SORL1Q92673 2214 aa16.39■□□□□ 0.21
PSPC1-204ENST00000492741 A0A0J9YX75 114 aa16.39■□□□□ 0.21
PSPC1-204ENST00000492741 FBLL1A6NHQ2 334 aaKnown RBP16.39■□□□□ 0.21
PSPC1-204ENST00000492741 IGLV2-11P01706 119 aa16.39■□□□□ 0.21
PSPC1-204ENST00000492741 TMEM241Q24JQ0 296 aa16.39■□□□□ 0.21
PSPC1-204ENST00000492741 C9orf47Q6ZRZ4 202 aa16.39■□□□□ 0.21
PSPC1-204ENST00000492741 OR4B1Q8NGF8 309 aa16.39■□□□□ 0.21
PSPC1-204ENST00000492741 LINC00477Q96M19 166 aa16.39■□□□□ 0.21
PSPC1-204ENST00000492741 ASCL2Q99929 193 aa16.39■□□□□ 0.21
PSPC1-204ENST00000492741 PPP1R14DQ9NXH3 145 aa16.39■□□□□ 0.21
PSPC1-204ENST00000492741 NOTCH3Q9UM47 2321 aa16.38■□□□□ 0.21
PSPC1-204ENST00000492741 KRTAP21-3Q3LHN1 58 aa16.38■□□□□ 0.21
PSPC1-204ENST00000492741 Q8TAT8 98 aa16.38■□□□□ 0.21
PSPC1-204ENST00000492741 NPIPB6E9PJ23 425 aa16.37■□□□□ 0.21
PSPC1-204ENST00000492741 DUSP14O95147 198 aaKnown RBP16.37■□□□□ 0.21
PSPC1-204ENST00000492741 IGKV3-20P01619 116 aa16.37■□□□□ 0.21
PSPC1-204ENST00000492741 ZNF138P52744 262 aa16.37■□□□□ 0.21
PSPC1-204ENST00000492741 Q86TA4 180 aa16.37■□□□□ 0.21
PSPC1-204ENST00000492741 NDFIP1Q9BT67 221 aa16.37■□□□□ 0.21
PSPC1-204ENST00000492741 NAT8Q9UHE5 227 aa16.37■□□□□ 0.21
PSPC1-204ENST00000492741 TRBV20OR9-2A0A075B6H5 130 aa16.36■□□□□ 0.21
PSPC1-204ENST00000492741 PGPEP1LA6NFU8 196 aa16.36■□□□□ 0.21
PSPC1-204ENST00000492741 C9JCJ5 164 aa16.36■□□□□ 0.21
PSPC1-204ENST00000492741 NHLRC2Q8NBF2 726 aa16.36■□□□□ 0.21
PSPC1-204ENST00000492741 FAM110AQ9BQ89 295 aa16.36■□□□□ 0.21
PSPC1-204ENST00000492741 ZFP30Q9Y2G7 519 aa16.36■□□□□ 0.21
PSPC1-204ENST00000492741 LTAP01374 205 aa16.36■□□□□ 0.21
PSPC1-204ENST00000492741 APOC3P02656 99 aa16.36■□□□□ 0.21
PSPC1-204ENST00000492741 IGF2BP2-AS1Q96M15 143 aa16.36■□□□□ 0.21
PSPC1-204ENST00000492741 AURKAIP1Q9NWT8 199 aaPredicted RBP16.36■□□□□ 0.21
PSPC1-204ENST00000492741 ZNF492Q9P255 531 aa16.36■□□□□ 0.21
PSPC1-204ENST00000492741 ANK2Q01484 3957 aa16.36■□□□□ 0.21
PSPC1-204ENST00000492741 TRBV6-1A0A0K0K1D8 114 aa16.35■□□□□ 0.21
PSPC1-204ENST00000492741 MGST1P10620 155 aaKnown RBP16.35■□□□□ 0.21
PSPC1-204ENST00000492741 SAPCD1Q5SSQ6 148 aa16.35■□□□□ 0.21
PSPC1-204ENST00000492741 STHQ8IWL8 128 aa16.35■□□□□ 0.21
PSPC1-204ENST00000492741 ZMAT5Q9UDW3 170 aaKnown RBP16.35■□□□□ 0.21
PSPC1-204ENST00000492741 CT45A10P0DMU9 189 aa16.34■□□□□ 0.21
PSPC1-204ENST00000492741 HLA-DRB4P13762 266 aa16.34■□□□□ 0.21
PSPC1-204ENST00000492741 OCC1Q8TAD7 63 aa16.34■□□□□ 0.21
PSPC1-204ENST00000492741 TVP23CQ96ET8 276 aa16.34■□□□□ 0.21
PSPC1-204ENST00000492741 PRR25Q96S07 402 aa16.34■□□□□ 0.21
PSPC1-204ENST00000492741 HLA-DRB4X5D2U9 266 aa16.34■□□□□ 0.21
PSPC1-204ENST00000492741 ADIRFQ15847 76 aa16.33■□□□□ 0.21
PSPC1-204ENST00000492741 C10orf91Q5T1B1 145 aa16.33■□□□□ 0.21
PSPC1-204ENST00000492741 WFDC10AQ9H1F0 79 aa16.33■□□□□ 0.21
PSPC1-204ENST00000492741 SDF2L1Q9HCN8 221 aa16.33■□□□□ 0.21
PSPC1-204ENST00000492741 CARHSP1Q9Y2V2 147 aaKnown RBP16.33■□□□□ 0.21
PSPC1-204ENST00000492741 G3V4G9 280 aa16.33■□□□□ 0.2
PSPC1-204ENST00000492741 H3BMM0 161 aa16.33■□□□□ 0.2
PSPC1-204ENST00000492741 TMEM183AQ8IXX5 376 aa16.33■□□□□ 0.2
PSPC1-204ENST00000492741 C19orf73Q9NVV2 129 aa16.33■□□□□ 0.2
PSPC1-204ENST00000492741 M0R036 132 aa16.32■□□□□ 0.2
PSPC1-204ENST00000492741 C8orf49Q96NF6 230 aa16.32■□□□□ 0.2
PSPC1-204ENST00000492741 LY96Q9Y6Y9 160 aa16.32■□□□□ 0.2
PSPC1-204ENST00000492741 S100A1P23297 94 aa16.31■□□□□ 0.2
PSPC1-204ENST00000492741 RPL23P62829 140 aaKnown RBP16.31■□□□□ 0.2
PSPC1-204ENST00000492741 LINC01551Q86U37 167 aa16.31■□□□□ 0.2
PSPC1-204ENST00000492741 DEFB125Q8N687 156 aa16.31■□□□□ 0.2
PSPC1-204ENST00000492741 LENEPQ9Y5L5 61 aa16.31■□□□□ 0.2
PSPC1-204ENST00000492741 J3KRW8 73 aa16.31■□□□□ 0.2
PSPC1-204ENST00000492741 PRR27Q6MZM9 219 aa16.31■□□□□ 0.2
PSPC1-204ENST00000492741 SMIM12Q96EX1 92 aa16.31■□□□□ 0.2
PSPC1-204ENST00000492741 IGLV2-8P01709 118 aa16.3■□□□□ 0.2
PSPC1-204ENST00000492741 PNRC1Q12796 327 aaPredicted RBP16.3■□□□□ 0.2
PSPC1-204ENST00000492741 SVBPQ8N300 66 aa16.3■□□□□ 0.2
PSPC1-204ENST00000492741 MLST8Q9BVC4 326 aa16.3■□□□□ 0.2
PSPC1-204ENST00000492741 EGFEM1PQ0D2K5 195 aa16.29■□□□□ 0.2
PSPC1-204ENST00000492741 OR5I1Q13606 314 aa16.29■□□□□ 0.2
PSPC1-204ENST00000492741 SMUG1Q53HV7 270 aa16.29■□□□□ 0.2
PSPC1-204ENST00000492741 K7EN84 100 aa16.28■□□□□ 0.2
PSPC1-204ENST00000492741 GPX1P07203 203 aa16.28■□□□□ 0.2
PSPC1-204ENST00000492741 KRTAP10-11P60412 298 aa16.28■□□□□ 0.2
PSPC1-204ENST00000492741 BIN3Q9NQY0 253 aa16.28■□□□□ 0.2
PSPC1-204ENST00000492741 AGRNO00468 2067 aa16.28■□□□□ 0.2
PSPC1-204ENST00000492741 TSPOP30536 169 aa16.28■□□□□ 0.2
PSPC1-204ENST00000492741 LEPP41159 167 aa16.28■□□□□ 0.2
PSPC1-204ENST00000492741 SAMD5Q5TGI4 173 aa16.28■□□□□ 0.2
PSPC1-204ENST00000492741 ZC2HC1AQ96GY0 325 aa16.28■□□□□ 0.2
PSPC1-204ENST00000492741 GCGP01275 180 aa16.27■□□□□ 0.19
PSPC1-204ENST00000492741 FXYD7P58549 80 aa16.27■□□□□ 0.19
PSPC1-204ENST00000492741 ODF3Q96PU9 254 aa16.27■□□□□ 0.19
PSPC1-204ENST00000492741 TRBV7-9A0A0J9YWB2 115 aa16.26■□□□□ 0.19
PSPC1-204ENST00000492741 M0R2Z0 102 aa16.26■□□□□ 0.19
PSPC1-204ENST00000492741 SNAPINO95295 136 aa16.26■□□□□ 0.19
PSPC1-204ENST00000492741 SPINK13Q1W4C9 94 aa16.26■□□□□ 0.19
PSPC1-204ENST00000492741 TRPT1Q86TN4 253 aaKnown RBP16.26■□□□□ 0.19
PSPC1-204ENST00000492741 DAZAP1Q96EP5 407 aaKnown RBP16.26■□□□□ 0.19
PSPC1-204ENST00000492741 FAM19A4Q96LR4 140 aa16.26■□□□□ 0.19
PSPC1-204ENST00000492741 RPL35AP18077 110 aaKnown RBP16.25■□□□□ 0.19
PSPC1-204ENST00000492741 CDKN1BP46527 198 aa16.25■□□□□ 0.19
PSPC1-204ENST00000492741 NUTF2P61970 127 aaKnown RBP16.25■□□□□ 0.19
PSPC1-204ENST00000492741 Q8N1Y9 231 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms