RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 CNFNQ9BYD5 112 aa5.05□□□□□ -1.6
CCDC6-202ENST00000491922 GAGE2DQ9UEU5 116 aa5.05□□□□□ -1.6
CCDC6-202ENST00000491922 DNAJC13O75165 2243 aa5.05□□□□□ -1.6
CCDC6-202ENST00000491922 TRAV12-1A0A0B4J245 112 aa5.05□□□□□ -1.6
CCDC6-202ENST00000491922 FABP5P3A8MUU1 101 aa5.05□□□□□ -1.6
CCDC6-202ENST00000491922 H3BRN7 92 aa5.05□□□□□ -1.6
CCDC6-202ENST00000491922 NTN3O00634 580 aaPredicted RBP5.05□□□□□ -1.6
CCDC6-202ENST00000491922 WIPF1O43516 503 aa5.05□□□□□ -1.6
CCDC6-202ENST00000491922 UBE2D1P51668 147 aa5.05□□□□□ -1.6
CCDC6-202ENST00000491922 Q6Q795 121 aa5.05□□□□□ -1.6
CCDC6-202ENST00000491922 OR11H6Q8NGC7 330 aa5.05□□□□□ -1.6
CCDC6-202ENST00000491922 PTH2Q96A98 100 aa5.05□□□□□ -1.6
CCDC6-202ENST00000491922 GAFA1Q96PS6 74 aa5.05□□□□□ -1.6
CCDC6-202ENST00000491922 FBXL15Q9H469 300 aa5.05□□□□□ -1.6
CCDC6-202ENST00000491922 AAMDCQ9H7C9 122 aa5.05□□□□□ -1.6
CCDC6-202ENST00000491922 DSCAMO60469 2012 aa5.05□□□□□ -1.6
CCDC6-202ENST00000491922 RAI1Q7Z5J4 1906 aaPredicted RBP5.04□□□□□ -1.6
CCDC6-202ENST00000491922 PRR14LQ5THK1 2151 aa5.04□□□□□ -1.6
CCDC6-202ENST00000491922 CACNA1EQ15878 2313 aa5.04□□□□□ -1.6
CCDC6-202ENST00000491922 H7C1H1 209 aa5.04□□□□□ -1.6
CCDC6-202ENST00000491922 K7ESF4 209 aa5.04□□□□□ -1.6
CCDC6-202ENST00000491922 SNCGO76070 127 aa5.04□□□□□ -1.6
CCDC6-202ENST00000491922 IGLV1-44P01699 117 aa5.04□□□□□ -1.6
CCDC6-202ENST00000491922 RPL27AP46776 148 aaKnown RBP5.04□□□□□ -1.6
CCDC6-202ENST00000491922 TCF15Q12870 199 aa5.04□□□□□ -1.6
CCDC6-202ENST00000491922 PDE6HQ13956 83 aa5.04□□□□□ -1.6
CCDC6-202ENST00000491922 LAGE3Q14657 143 aa5.04□□□□□ -1.6
CCDC6-202ENST00000491922 C6orf15Q6UXA7 325 aaPredicted RBP5.04□□□□□ -1.6
CCDC6-202ENST00000491922 RASL11BQ9BPW5 248 aa5.04□□□□□ -1.6
CCDC6-202ENST00000491922 IGLV2-18A0A075B6J9 118 aa5.04□□□□□ -1.6
CCDC6-202ENST00000491922 IGHV3-21A0A0B4J1V1 117 aa5.04□□□□□ -1.6
CCDC6-202ENST00000491922 CENPVL3A0A0U1RRI6 287 aa5.04□□□□□ -1.6
CCDC6-202ENST00000491922 F8VRH5 84 aa5.04□□□□□ -1.6
CCDC6-202ENST00000491922 NDUFA3O95167 84 aa5.04□□□□□ -1.6
CCDC6-202ENST00000491922 IGHG4P01861 327 aa5.04□□□□□ -1.6
CCDC6-202ENST00000491922 LGALS1P09382 135 aaKnown RBP5.04□□□□□ -1.6
CCDC6-202ENST00000491922 EGR2P11161 476 aaPredicted RBP5.04□□□□□ -1.6
CCDC6-202ENST00000491922 IFITM1P13164 125 aa5.04□□□□□ -1.6
CCDC6-202ENST00000491922 DIAPH2-AS1Q14236 149 aa5.04□□□□□ -1.6
CCDC6-202ENST00000491922 TTC32Q5I0X7 151 aa5.04□□□□□ -1.6
CCDC6-202ENST00000491922 DUX4L9Q6RFH8 374 aaPredicted RBP5.04□□□□□ -1.6
CCDC6-202ENST00000491922 PIP4P1Q86T03 277 aa5.04□□□□□ -1.6
CCDC6-202ENST00000491922 C1orf210Q8IVY1 113 aa5.04□□□□□ -1.6
CCDC6-202ENST00000491922 ANKRD29Q8N6D5 301 aa5.04□□□□□ -1.6
CCDC6-202ENST00000491922 C17orf77Q96MU5 243 aa5.04□□□□□ -1.6
CCDC6-202ENST00000491922 RNF7Q9UBF6 113 aa5.04□□□□□ -1.6
CCDC6-202ENST00000491922 DKK4Q9UBT3 224 aa5.04□□□□□ -1.6
CCDC6-202ENST00000491922 TRGV5A0A0B4J1U4 118 aa5.03□□□□□ -1.6
CCDC6-202ENST00000491922 CD40P25942 277 aa5.03□□□□□ -1.6
CCDC6-202ENST00000491922 GATA4P43694 442 aa5.03□□□□□ -1.6
CCDC6-202ENST00000491922 SPRNQ5BIV9 151 aa5.03□□□□□ -1.6
CCDC6-202ENST00000491922 TMEM78Q5T7P6 136 aa5.03□□□□□ -1.6
CCDC6-202ENST00000491922 ZFP2Q6ZN57 461 aa5.03□□□□□ -1.6
CCDC6-202ENST00000491922 DEFB127Q9H1M4 99 aa5.03□□□□□ -1.6
CCDC6-202ENST00000491922 SPRR3Q9UBC9 169 aa5.03□□□□□ -1.6
CCDC6-202ENST00000491922 VPREB3Q9UKI3 123 aa5.03□□□□□ -1.6
CCDC6-202ENST00000491922 IGHV1-18A0A0C4DH31 117 aa5.03□□□□□ -1.6
CCDC6-202ENST00000491922 CCDC179H3BU77 68 aa5.03□□□□□ -1.6
CCDC6-202ENST00000491922 M0R3E3 92 aa5.03□□□□□ -1.6
CCDC6-202ENST00000491922 MRPS12O15235 138 aaKnown RBP5.03□□□□□ -1.6
CCDC6-202ENST00000491922 TCL1BO95988 128 aa5.03□□□□□ -1.6
CCDC6-202ENST00000491922 MRGPRG-AS1Q2M3A8 158 aa5.03□□□□□ -1.6
CCDC6-202ENST00000491922 FAM201AQ5SY85 155 aa5.03□□□□□ -1.6
CCDC6-202ENST00000491922 PRR25Q96S07 402 aa5.03□□□□□ -1.6
CCDC6-202ENST00000491922 CCL13Q99616 98 aa5.03□□□□□ -1.6
CCDC6-202ENST00000491922 TPSG1Q9NRR2 321 aa5.03□□□□□ -1.6
CCDC6-202ENST00000491922 RAXQ9Y2V3 346 aa5.03□□□□□ -1.6
CCDC6-202ENST00000491922 SPEGQ15772 3267 aa5.02□□□□□ -1.61
CCDC6-202ENST00000491922 SPRY3O43610 288 aa5.02□□□□□ -1.61
CCDC6-202ENST00000491922 FCN3O75636 299 aa5.02□□□□□ -1.61
CCDC6-202ENST00000491922 GAS8-AS1O95177 125 aa5.02□□□□□ -1.61
CCDC6-202ENST00000491922 SCGB1C2P0DMR2 95 aa5.02□□□□□ -1.61
CCDC6-202ENST00000491922 WT1P19544 449 aaPredicted RBP5.02□□□□□ -1.61
CCDC6-202ENST00000491922 PPP1R27Q86WC6 154 aa5.02□□□□□ -1.61
CCDC6-202ENST00000491922 LINC00311Q8N616 119 aa5.02□□□□□ -1.61
CCDC6-202ENST00000491922 FAM216BQ8N7L0 139 aa5.02□□□□□ -1.61
CCDC6-202ENST00000491922 C8orf31Q8N9H6 132 aa5.02□□□□□ -1.61
CCDC6-202ENST00000491922 KIR2DL4Q99706 377 aa5.02□□□□□ -1.61
CCDC6-202ENST00000491922 H3BVH4 76 aa5.02□□□□□ -1.61
CCDC6-202ENST00000491922 CD7P09564 240 aa5.02□□□□□ -1.61
CCDC6-202ENST00000491922 SRSF9Q13242 221 aaKnown RBP eCLIP5.02□□□□□ -1.61
CCDC6-202ENST00000491922 AJUBAQ96IF1 538 aa5.02□□□□□ -1.61
CCDC6-202ENST00000491922 MSRB1Q9NZV6 116 aa5.02□□□□□ -1.61
CCDC6-202ENST00000491922 PROCRQ9UNN8 238 aa5.02□□□□□ -1.61
CCDC6-202ENST00000491922 SDK1Q7Z5N4 2213 aa5.02□□□□□ -1.61
CCDC6-202ENST00000491922 I3L2K1 104 aa5.01□□□□□ -1.61
CCDC6-202ENST00000491922 IGKV1-17P01599 117 aa5.01□□□□□ -1.61
CCDC6-202ENST00000491922 MSMPQ1L6U9 139 aa5.01□□□□□ -1.61
CCDC6-202ENST00000491922 PRR30Q53SZ7 412 aaPredicted RBP5.01□□□□□ -1.61
CCDC6-202ENST00000491922 SCGB1D4Q6XE38 83 aa5.01□□□□□ -1.61
CCDC6-202ENST00000491922 DTX2Q86UW9 622 aa5.01□□□□□ -1.61
CCDC6-202ENST00000491922 NDUFA11Q86Y39 141 aa5.01□□□□□ -1.61
CCDC6-202ENST00000491922 CNEP1R1Q8N9A8 125 aa5.01□□□□□ -1.61
CCDC6-202ENST00000491922 MDS2Q8NDY4 140 aa5.01□□□□□ -1.61
CCDC6-202ENST00000491922 DEFB108BQ8NET1 73 aa5.01□□□□□ -1.61
CCDC6-202ENST00000491922 TRAV8-2A0A0B4J237 113 aa5.01□□□□□ -1.61
CCDC6-202ENST00000491922 LINC01548A6NM66 108 aa5.01□□□□□ -1.61
CCDC6-202ENST00000491922 ZNF815PA8K554 130 aa5.01□□□□□ -1.61
CCDC6-202ENST00000491922 ORM1P02763 201 aa5.01□□□□□ -1.61
CCDC6-202ENST00000491922 GATA1P15976 413 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 365.9 ms