RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 ZNF106Q9H2Y7 1883 aaKnown RBP1.01□□□□□ -2.25
VTA1-204ENST00000491881 EML5Q05BV3 1969 aa1□□□□□ -2.25
VTA1-204ENST00000491881 TRAV9-1A0A075B6T8 112 aa1□□□□□ -2.25
VTA1-204ENST00000491881 DPRXA6NFQ7 191 aa1□□□□□ -2.25
VTA1-204ENST00000491881 FAAHO00519 579 aa1□□□□□ -2.25
VTA1-204ENST00000491881 GEMIN2O14893 280 aaKnown RBP1□□□□□ -2.25
VTA1-204ENST00000491881 NIPSNAP2O75323 286 aa1□□□□□ -2.25
VTA1-204ENST00000491881 CRYZL1O95825 349 aa1□□□□□ -2.25
VTA1-204ENST00000491881 IFNA10P01566 189 aa1□□□□□ -2.25
VTA1-204ENST00000491881 FKBP2P26885 142 aaKnown RBP1□□□□□ -2.25
VTA1-204ENST00000491881 RPL5P46777 297 aaKnown RBP1□□□□□ -2.25
VTA1-204ENST00000491881 KHDC3LQ587J8 217 aa1□□□□□ -2.25
VTA1-204ENST00000491881 TEX36Q5VZQ5 186 aa1□□□□□ -2.25
VTA1-204ENST00000491881 Q6ZQT0 140 aa1□□□□□ -2.25
VTA1-204ENST00000491881 ZNF826PQ6ZT77 177 aa1□□□□□ -2.25
VTA1-204ENST00000491881 C3orf56Q8N813 242 aa1□□□□□ -2.25
VTA1-204ENST00000491881 OR5A1Q8NGJ0 315 aa1□□□□□ -2.25
VTA1-204ENST00000491881 TOMM6Q96B49 74 aa1□□□□□ -2.25
VTA1-204ENST00000491881 SLC50A1Q9BRV3 221 aa1□□□□□ -2.25
VTA1-204ENST00000491881 SLC39A9Q9NUM3 307 aa1□□□□□ -2.25
VTA1-204ENST00000491881 TP73-AS1Q9UF72 201 aa1□□□□□ -2.25
VTA1-204ENST00000491881 TMEM56-RWDD3S4R434 201 aa1□□□□□ -2.25
VTA1-204ENST00000491881 INTS1Q8N201 2190 aaKnown RBP1□□□□□ -2.25
VTA1-204ENST00000491881 PI4KAP42356 2102 aa1□□□□□ -2.25
VTA1-204ENST00000491881 PTPRFP10586 1907 aa0.99□□□□□ -2.25
VTA1-204ENST00000491881 HRNRQ86YZ3 2850 aaPredicted RBP0.99□□□□□ -2.25
VTA1-204ENST00000491881 MYO3BQ8WXR4 1341 aa0.99□□□□□ -2.25
VTA1-204ENST00000491881 IGKV1D-42A0A075B6H8 117 aa0.99□□□□□ -2.25
VTA1-204ENST00000491881 EXOC1LA0A1B0GW35 172 aa0.99□□□□□ -2.25
VTA1-204ENST00000491881 FADS1O60427 444 aa0.99□□□□□ -2.25
VTA1-204ENST00000491881 CRYGAP11844 174 aa0.99□□□□□ -2.25
VTA1-204ENST00000491881 RNASE3P12724 160 aaKnown RBP0.99□□□□□ -2.25
VTA1-204ENST00000491881 SPI1P17947 270 aa0.99□□□□□ -2.25
VTA1-204ENST00000491881 BRS3P32247 399 aa0.99□□□□□ -2.25
VTA1-204ENST00000491881 ASIPP42127 132 aa0.99□□□□□ -2.25
VTA1-204ENST00000491881 IMPG1Q17R60 797 aa0.99□□□□□ -2.25
VTA1-204ENST00000491881 SPANXN5Q5MJ07 72 aa0.99□□□□□ -2.25
VTA1-204ENST00000491881 PHF13Q86YI8 300 aaPredicted RBP0.99□□□□□ -2.25
VTA1-204ENST00000491881 OR4C6Q8NH72 309 aa0.99□□□□□ -2.25
VTA1-204ENST00000491881 TERB2Q8NHR7 220 aa0.99□□□□□ -2.25
VTA1-204ENST00000491881 H1FXQ92522 213 aaKnown RBP0.99□□□□□ -2.25
VTA1-204ENST00000491881 PQLC2LA1A4F0 135 aa0.98□□□□□ -2.25
VTA1-204ENST00000491881 OR4C46A6NHA9 309 aa0.98□□□□□ -2.25
VTA1-204ENST00000491881 CHP2O43745 196 aa0.98□□□□□ -2.25
VTA1-204ENST00000491881 TCL1BO95988 128 aa0.98□□□□□ -2.25
VTA1-204ENST00000491881 CTSDP07339 412 aaPredicted RBP0.98□□□□□ -2.25
VTA1-204ENST00000491881 ASAH2BP0C7U1 165 aa0.98□□□□□ -2.25
VTA1-204ENST00000491881 OMPP47874 163 aa0.98□□□□□ -2.25
VTA1-204ENST00000491881 DEFA1P59665 94 aa0.98□□□□□ -2.25
VTA1-204ENST00000491881 RPS20P60866 119 aaKnown RBP0.98□□□□□ -2.25
VTA1-204ENST00000491881 CTAG1AP78358 180 aa0.98□□□□□ -2.25
VTA1-204ENST00000491881 RHEBQ15382 184 aa0.98□□□□□ -2.25
VTA1-204ENST00000491881 OOSP2Q86WS3 158 aa0.98□□□□□ -2.25
VTA1-204ENST00000491881 HIST3H2BBQ8N257 126 aa0.98□□□□□ -2.25
VTA1-204ENST00000491881 FAM19A2Q8N3H0 131 aa0.98□□□□□ -2.25
VTA1-204ENST00000491881 CCDC42Q96M95 316 aa0.98□□□□□ -2.25
VTA1-204ENST00000491881 MRPL57Q9BQC6 102 aaKnown RBP0.98□□□□□ -2.25
VTA1-204ENST00000491881 MRPL27Q9P0M9 148 aaKnown RBP0.98□□□□□ -2.25
VTA1-204ENST00000491881 NOSIPQ9Y314 301 aaKnown RBP0.98□□□□□ -2.25
VTA1-204ENST00000491881 MYLKQ15746 1914 aa0.97□□□□□ -2.25
VTA1-204ENST00000491881 TLCD2A6NGC4 264 aa0.97□□□□□ -2.25
VTA1-204ENST00000491881 CLDN24A6NM45 220 aa0.97□□□□□ -2.25
VTA1-204ENST00000491881 COX6A1P12074 109 aa0.97□□□□□ -2.25
VTA1-204ENST00000491881 CEBPGP53567 150 aa0.97□□□□□ -2.25
VTA1-204ENST00000491881 TRAPPC5Q8IUR0 188 aa0.97□□□□□ -2.25
VTA1-204ENST00000491881 LINC00311Q8N616 119 aa0.97□□□□□ -2.25
VTA1-204ENST00000491881 CLDN22Q8N7P3 220 aa0.97□□□□□ -2.25
VTA1-204ENST00000491881 C8orf76Q96K31 380 aa0.97□□□□□ -2.25
VTA1-204ENST00000491881 TMEM147Q9BVK8 224 aa0.97□□□□□ -2.25
VTA1-204ENST00000491881 MIXL1Q9H2W2 232 aa0.97□□□□□ -2.25
VTA1-204ENST00000491881 ERGIC3Q9Y282 383 aa0.97□□□□□ -2.25
VTA1-204ENST00000491881 TNXBP22105 4242 aa0.97□□□□□ -2.25
VTA1-204ENST00000491881 NCOA6Q14686 2063 aaPredicted RBP0.96□□□□□ -2.25
VTA1-204ENST00000491881 A0A087WX48 190 aa0.96□□□□□ -2.26
VTA1-204ENST00000491881 PIRO00625 290 aa0.96□□□□□ -2.26
VTA1-204ENST00000491881 RPP14O95059 124 aaKnown RBP0.96□□□□□ -2.26
VTA1-204ENST00000491881 SERPINA6P08185 405 aa0.96□□□□□ -2.26
VTA1-204ENST00000491881 S100A4P26447 101 aaKnown RBP0.96□□□□□ -2.26
VTA1-204ENST00000491881 ITGB3BPQ13352 177 aaPredicted RBP0.96□□□□□ -2.26
VTA1-204ENST00000491881 MED12LQ86YW9 2145 aa0.96□□□□□ -2.26
VTA1-204ENST00000491881 KRT222Q8N1A0 295 aa0.96□□□□□ -2.26
VTA1-204ENST00000491881 SIGLECL1Q8N7X8 197 aa0.96□□□□□ -2.26
VTA1-204ENST00000491881 TSPAN32Q96QS1 320 aa0.96□□□□□ -2.26
VTA1-204ENST00000491881 PARD6GQ9BYG4 376 aaPredicted RBP0.96□□□□□ -2.26
VTA1-204ENST00000491881 CCDC90BQ9GZT6 254 aa0.96□□□□□ -2.26
VTA1-204ENST00000491881 PARVGQ9HBI0 331 aa0.96□□□□□ -2.26
VTA1-204ENST00000491881 C22orf24Q9Y442 160 aa0.96□□□□□ -2.26
VTA1-204ENST00000491881 DNAH17Q9UFH2 4485 aa0.96□□□□□ -2.26
VTA1-204ENST00000491881 ANAPC1Q9H1A4 1944 aa0.95□□□□□ -2.26
VTA1-204ENST00000491881 TRAV26-2A0A0B4J265 109 aa0.95□□□□□ -2.26
VTA1-204ENST00000491881 IGKV1-9A0A0C4DH69 117 aa0.95□□□□□ -2.26
VTA1-204ENST00000491881 GOLGA6L19H0YKK7 550 aa0.95□□□□□ -2.26
VTA1-204ENST00000491881 BUB1B-PAK6H3BSN5 160 aa0.95□□□□□ -2.26
VTA1-204ENST00000491881 OR2B3O76000 313 aa0.95□□□□□ -2.26
VTA1-204ENST00000491881 TTRP02766 147 aa0.95□□□□□ -2.26
VTA1-204ENST00000491881 RPS17P08708 135 aaKnown RBP0.95□□□□□ -2.26
VTA1-204ENST00000491881 TRAPPC6BQ86SZ2 158 aa0.95□□□□□ -2.26
VTA1-204ENST00000491881 BORCS7Q96B45 105 aa0.95□□□□□ -2.26
VTA1-204ENST00000491881 CMSS1Q9BQ75 279 aaKnown RBP0.95□□□□□ -2.26
VTA1-204ENST00000491881 C20orf27Q9GZN8 174 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms