RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-208ENST00000491541 NAV3Q8IVL0 2385 aa8.08□□□□□ -1.12
SREBF2-208ENST00000491541 MBD3L2Q8NHZ7 208 aaPredicted RBP8.08□□□□□ -1.12
SREBF2-208ENST00000491541 FAM106CPP0CH98 169 aa8.07□□□□□ -1.12
SREBF2-208ENST00000491541 CCL8P80075 99 aa8.07□□□□□ -1.12
SREBF2-208ENST00000491541 KLRD1Q13241 179 aa8.07□□□□□ -1.12
SREBF2-208ENST00000491541 FAM106AQ4KMX7 169 aa8.07□□□□□ -1.12
SREBF2-208ENST00000491541 C10orf55Q5SWW7 151 aa8.07□□□□□ -1.12
SREBF2-208ENST00000491541 ZNRD1Q9P1U0 126 aa8.07□□□□□ -1.12
SREBF2-208ENST00000491541 CEP295Q9C0D2 2601 aa8.07□□□□□ -1.12
SREBF2-208ENST00000491541 FRYLO94915 3013 aa8.07□□□□□ -1.12
SREBF2-208ENST00000491541 D6R8Y8 96 aa8.07□□□□□ -1.12
SREBF2-208ENST00000491541 FXYD2P54710 66 aa8.07□□□□□ -1.12
SREBF2-208ENST00000491541 MOGAT3Q86VF5 341 aa8.07□□□□□ -1.12
SREBF2-208ENST00000491541 IFI27L1Q96BM0 104 aa8.07□□□□□ -1.12
SREBF2-208ENST00000491541 PRELID3AQ96N28 172 aa8.07□□□□□ -1.12
SREBF2-208ENST00000491541 TRBV19A0A075B6N1 114 aa8.07□□□□□ -1.12
SREBF2-208ENST00000491541 MED14OSP0DP75 135 aa8.07□□□□□ -1.12
SREBF2-208ENST00000491541 HIST1H4GQ99525 98 aa8.07□□□□□ -1.12
SREBF2-208ENST00000491541 EDA2RQ9HAV5 297 aa8.07□□□□□ -1.12
SREBF2-208ENST00000491541 LOC107984156A0A0G2JMH3 177 aa8.06□□□□□ -1.12
SREBF2-208ENST00000491541 C16orf97H3BN30 126 aa8.06□□□□□ -1.12
SREBF2-208ENST00000491541 IGKV1-16P04430 117 aa8.06□□□□□ -1.12
SREBF2-208ENST00000491541 SRD5A1P18405 259 aa8.06□□□□□ -1.12
SREBF2-208ENST00000491541 CKS2P33552 79 aa8.06□□□□□ -1.12
SREBF2-208ENST00000491541 SUB1P53999 127 aaKnown RBP eCLIP8.06□□□□□ -1.125e-8■□□□□ 10.9
SREBF2-208ENST00000491541 TNFAIP6P98066 277 aaPredicted RBP8.06□□□□□ -1.12
SREBF2-208ENST00000491541 ARL17AQ8IVW1 177 aa8.06□□□□□ -1.12
SREBF2-208ENST00000491541 RNF223E7ERA6 249 aa8.06□□□□□ -1.12
SREBF2-208ENST00000491541 SMKR1H3BMG3 65 aa8.06□□□□□ -1.12
SREBF2-208ENST00000491541 COX7A1P24310 79 aa8.06□□□□□ -1.12
SREBF2-208ENST00000491541 LOXL1Q08397 574 aaPredicted RBP8.06□□□□□ -1.12
SREBF2-208ENST00000491541 MSMPQ1L6U9 139 aa8.06□□□□□ -1.12
SREBF2-208ENST00000491541 CCDC144NLQ6NUI1 221 aa8.06□□□□□ -1.12
SREBF2-208ENST00000491541 GTSCR1Q86UQ5 136 aa8.06□□□□□ -1.12
SREBF2-208ENST00000491541 ZNF418Q8TF45 676 aaPredicted RBP8.06□□□□□ -1.12
SREBF2-208ENST00000491541 SHANK2-AS3Q9BTD1 123 aa8.06□□□□□ -1.12
SREBF2-208ENST00000491541 Q9H3A6 140 aa8.06□□□□□ -1.12
SREBF2-208ENST00000491541 SS18L2Q9UHA2 77 aa8.06□□□□□ -1.12
SREBF2-208ENST00000491541 IGHV1-18A0A0C4DH31 117 aa8.06□□□□□ -1.12
SREBF2-208ENST00000491541 APOMO95445 188 aa8.06□□□□□ -1.12
SREBF2-208ENST00000491541 SPINK8P0C7L1 97 aa8.06□□□□□ -1.12
SREBF2-208ENST00000491541 SAA1P0DJI8 122 aaPredicted RBP8.06□□□□□ -1.12
SREBF2-208ENST00000491541 CD59P13987 128 aa8.06□□□□□ -1.12
SREBF2-208ENST00000491541 RPL11P62913 178 aaKnown RBP8.06□□□□□ -1.12
SREBF2-208ENST00000491541 GAGE13Q4V321 117 aa8.06□□□□□ -1.12
SREBF2-208ENST00000491541 CFAP126Q5VTH2 177 aa8.06□□□□□ -1.12
SREBF2-208ENST00000491541 CEND1Q8N111 149 aa8.06□□□□□ -1.12
SREBF2-208ENST00000491541 FBXL15Q9H469 300 aa8.06□□□□□ -1.12
SREBF2-208ENST00000491541 TMEM160Q9NX00 188 aa8.06□□□□□ -1.12
SREBF2-208ENST00000491541 PGPEP1Q9NXJ5 209 aa8.06□□□□□ -1.12
SREBF2-208ENST00000491541 TGFAP01135 160 aa8.06□□□□□ -1.12
SREBF2-208ENST00000491541 EXOC3-AS1Q8N2X6 119 aa8.06□□□□□ -1.12
SREBF2-208ENST00000491541 FAM19A4Q96LR4 140 aa8.06□□□□□ -1.12
SREBF2-208ENST00000491541 DKK2Q9UBU2 259 aa8.06□□□□□ -1.12
SREBF2-208ENST00000491541 TLN1Q9Y490 2541 aaKnown RBP8.06□□□□□ -1.12
SREBF2-208ENST00000491541 TMEM8BA6NDV4 472 aa8.05□□□□□ -1.12
SREBF2-208ENST00000491541 H3BVH4 76 aa8.05□□□□□ -1.12
SREBF2-208ENST00000491541 UTF1Q5T230 341 aa8.05□□□□□ -1.12
SREBF2-208ENST00000491541 AMN1Q8IY45 258 aa8.05□□□□□ -1.12
SREBF2-208ENST00000491541 CHAC1Q9BUX1 264 aa8.05□□□□□ -1.12
SREBF2-208ENST00000491541 MRAP2Q96G30 205 aa8.05□□□□□ -1.12
SREBF2-208ENST00000491541 NDUFA3O95167 84 aa8.05□□□□□ -1.12
SREBF2-208ENST00000491541 HBDP02042 147 aa8.05□□□□□ -1.12
SREBF2-208ENST00000491541 MRPL23Q16540 153 aaKnown RBP8.05□□□□□ -1.12
SREBF2-208ENST00000491541 OTOGLQ3ZCN5 2332 aa8.04□□□□□ -1.12
SREBF2-208ENST00000491541 MYO9AB2RTY4 2548 aa8.04□□□□□ -1.12
SREBF2-208ENST00000491541 LINC01549A6NIU2 74 aa8.04□□□□□ -1.12
SREBF2-208ENST00000491541 NPBQ8NG41 125 aa8.04□□□□□ -1.12
SREBF2-208ENST00000491541 TPSG1Q9NRR2 321 aa8.04□□□□□ -1.12
SREBF2-208ENST00000491541 MRPL36Q9P0J6 103 aaKnown RBP8.04□□□□□ -1.12
SREBF2-208ENST00000491541 ABCA2Q9BZC7 2435 aa8.04□□□□□ -1.12
SREBF2-208ENST00000491541 SYT8Q8NBV8 401 aa8.04□□□□□ -1.12
SREBF2-208ENST00000491541 FDCSPQ8NFU4 85 aa8.04□□□□□ -1.12
SREBF2-208ENST00000491541 SPAG8Q99932 426 aaPredicted RBP8.04□□□□□ -1.12
SREBF2-208ENST00000491541 FOXC2Q99958 501 aa8.04□□□□□ -1.12
SREBF2-208ENST00000491541 HIF1ANQ9NWT6 349 aa8.04□□□□□ -1.12
SREBF2-208ENST00000491541 TRBV7-9A0A0J9YWB2 115 aa8.03□□□□□ -1.12
SREBF2-208ENST00000491541 NDUFB3O43676 98 aa8.03□□□□□ -1.12
SREBF2-208ENST00000491541 TWIST1Q15672 202 aa8.03□□□□□ -1.12
SREBF2-208ENST00000491541 TMEM105Q8N8V8 129 aa8.03□□□□□ -1.12
SREBF2-208ENST00000491541 TIMD4Q96H15 378 aa8.03□□□□□ -1.12
SREBF2-208ENST00000491541 SPANXDQ9BXN6 97 aa8.03□□□□□ -1.12
SREBF2-208ENST00000491541 E7EUB6 86 aa8.03□□□□□ -1.12
SREBF2-208ENST00000491541 IGLV1-47P01700 117 aa8.03□□□□□ -1.12
SREBF2-208ENST00000491541 INSL3P51460 131 aa8.03□□□□□ -1.12
SREBF2-208ENST00000491541 TMEM95Q3KNT9 176 aa8.03□□□□□ -1.12
SREBF2-208ENST00000491541 ANAPC13Q9BS18 74 aa8.03□□□□□ -1.12
SREBF2-208ENST00000491541 EYSQ5T1H1 3165 aa8.03□□□□□ -1.12
SREBF2-208ENST00000491541 IGHV3-72A0A0B4J1Y9 119 aa8.03□□□□□ -1.12
SREBF2-208ENST00000491541 TMEM213A2RRL7 107 aa8.03□□□□□ -1.12
SREBF2-208ENST00000491541 F8W735 103 aaPredicted RBP8.03□□□□□ -1.12
SREBF2-208ENST00000491541 ATP5LO75964 103 aa8.03□□□□□ -1.12
SREBF2-208ENST00000491541 GLRXP35754 106 aa8.03□□□□□ -1.12
SREBF2-208ENST00000491541 MORN3Q6PF18 240 aaPredicted RBP8.03□□□□□ -1.12
SREBF2-208ENST00000491541 ORMDL3Q8N138 153 aa8.03□□□□□ -1.12
SREBF2-208ENST00000491541 C20orf78Q9BR46 151 aa8.03□□□□□ -1.12
SREBF2-208ENST00000491541 IGLL5B9A064 214 aa8.02□□□□□ -1.12
SREBF2-208ENST00000491541 ANXA2RQ3ZCQ2 193 aa8.02□□□□□ -1.12
SREBF2-208ENST00000491541 NRACQ8N912 160 aa8.02□□□□□ -1.12
SREBF2-208ENST00000491541 SPENQ96T58 3664 aaKnown RBP8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms