RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 APRG1Q8IVJ8 170 aa10.06□□□□□ -0.8
CDK9-204ENST00000491521 CCDC28AQ8IWP9 274 aa10.06□□□□□ -0.8
CDK9-204ENST00000491521 OR10J6PQ8NGY7 276 aa10.06□□□□□ -0.8
CDK9-204ENST00000491521 MRPL53Q96EL3 112 aaKnown RBP10.06□□□□□ -0.8
CDK9-204ENST00000491521 MAP6D1Q9H9H5 199 aa10.06□□□□□ -0.8
CDK9-204ENST00000491521 LCE6AA0A183 80 aa10.05□□□□□ -0.8
CDK9-204ENST00000491521 DIRC3C9JPN6 131 aa10.05□□□□□ -0.8
CDK9-204ENST00000491521 PEX7O00628 323 aa10.05□□□□□ -0.8
CDK9-204ENST00000491521 TCRAP04437 139 aa10.05□□□□□ -0.8
CDK9-204ENST00000491521 ZNF705DP0CH99 300 aaPredicted RBP10.05□□□□□ -0.8
CDK9-204ENST00000491521 ZNF705BP0CI00 300 aaPredicted RBP10.05□□□□□ -0.8
CDK9-204ENST00000491521 DEFB1P60022 68 aa10.05□□□□□ -0.8
CDK9-204ENST00000491521 SRSF3P84103 164 aaKnown RBP10.05□□□□□ -0.8
CDK9-204ENST00000491521 GOLT1AQ6ZVE7 132 aa10.05□□□□□ -0.8
CDK9-204ENST00000491521 HIST1H2BAQ96A08 127 aa10.05□□□□□ -0.8
CDK9-204ENST00000491521 MED9Q9NWA0 146 aa10.05□□□□□ -0.8
CDK9-204ENST00000491521 IGKV2-40A0A087WW87 121 aaPredicted RBP10.04□□□□□ -0.8
CDK9-204ENST00000491521 SCO2A0A1W2PP80 73 aa10.04□□□□□ -0.8
CDK9-204ENST00000491521 KNCNA6PVL3 124 aa10.04□□□□□ -0.8
CDK9-204ENST00000491521 F6UB75 175 aa10.04□□□□□ -0.8
CDK9-204ENST00000491521 IGKV2D-40P01614 121 aaPredicted RBP10.04□□□□□ -0.8
CDK9-204ENST00000491521 HIST1H1AQ02539 215 aaPredicted RBP10.04□□□□□ -0.8
CDK9-204ENST00000491521 ZNF124Q15973 351 aa10.04□□□□□ -0.8
CDK9-204ENST00000491521 DEFB135Q30KP9 77 aa10.04□□□□□ -0.8
CDK9-204ENST00000491521 ODF3L2Q3SX64 289 aa10.04□□□□□ -0.8
CDK9-204ENST00000491521 ACTL10Q5JWF8 245 aa10.04□□□□□ -0.8
CDK9-204ENST00000491521 ARL6IP6Q8N6S5 226 aa10.04□□□□□ -0.8
CDK9-204ENST00000491521 OVOL2Q9BRP0 275 aa10.04□□□□□ -0.8
CDK9-204ENST00000491521 TCEAL7Q9BRU2 100 aa10.04□□□□□ -0.8
CDK9-204ENST00000491521 ATG101Q9BSB4 218 aa10.04□□□□□ -0.8
CDK9-204ENST00000491521 PPP1R14DQ9NXH3 145 aa10.04□□□□□ -0.8
CDK9-204ENST00000491521 IGKV3-20P01619 116 aa10.03□□□□□ -0.8
CDK9-204ENST00000491521 SRP19P09132 144 aaKnown RBP10.03□□□□□ -0.8
CDK9-204ENST00000491521 AKR1C3P42330 323 aa10.03□□□□□ -0.8
CDK9-204ENST00000491521 CNN1P51911 297 aaKnown RBP10.03□□□□□ -0.8
CDK9-204ENST00000491521 APOC4P55056 127 aa10.03□□□□□ -0.8
CDK9-204ENST00000491521 ERCC8Q13216 396 aa10.03□□□□□ -0.8
CDK9-204ENST00000491521 CYB561D1Q8N8Q1 229 aa10.03□□□□□ -0.8
CDK9-204ENST00000491521 OR4B1Q8NGF8 309 aa10.03□□□□□ -0.8
CDK9-204ENST00000491521 OR8A1Q8NGG7 326 aa10.03□□□□□ -0.8
CDK9-204ENST00000491521 IL17DQ8TAD2 202 aa10.03□□□□□ -0.8
CDK9-204ENST00000491521 SGK494Q96LW2 274 aa10.03□□□□□ -0.8
CDK9-204ENST00000491521 LINC00479Q96M42 142 aa10.03□□□□□ -0.8
CDK9-204ENST00000491521 SMDT1Q9H4I9 107 aa10.03□□□□□ -0.8
CDK9-204ENST00000491521 DNAH1Q9P2D7 4330 aa10.03□□□□□ -0.8
CDK9-204ENST00000491521 TRAV34A0A0B4J273 112 aa10.02□□□□□ -0.81
CDK9-204ENST00000491521 A0A0J9YX75 114 aa10.02□□□□□ -0.81
CDK9-204ENST00000491521 SERTM2A0A1B0GWG4 89 aa10.02□□□□□ -0.81
CDK9-204ENST00000491521 DUSP14O95147 198 aaKnown RBP10.02□□□□□ -0.81
CDK9-204ENST00000491521 UBE2G1P62253 170 aa10.02□□□□□ -0.81
CDK9-204ENST00000491521 ZNF674Q2M3X9 581 aa10.02□□□□□ -0.81
CDK9-204ENST00000491521 TMEM78Q5T7P6 136 aa10.02□□□□□ -0.81
CDK9-204ENST00000491521 FOXI2Q6ZQN5 318 aa10.02□□□□□ -0.81
CDK9-204ENST00000491521 STHQ8IWL8 128 aa10.02□□□□□ -0.81
CDK9-204ENST00000491521 VGLL1Q99990 258 aa10.02□□□□□ -0.81
CDK9-204ENST00000491521 SAV1Q9H4B6 383 aaPredicted RBP10.02□□□□□ -0.81
CDK9-204ENST00000491521 ALMS1Q8TCU4 4167 aa10.01□□□□□ -0.81
CDK9-204ENST00000491521 A0A0J9YWU9 116 aa10.01□□□□□ -0.81
CDK9-204ENST00000491521 C9JQL5 133 aa10.01□□□□□ -0.81
CDK9-204ENST00000491521 TMEM250H0YL14 139 aa10.01□□□□□ -0.81
CDK9-204ENST00000491521 SPRY2O43597 315 aa10.01□□□□□ -0.81
CDK9-204ENST00000491521 NDUFA5Q16718 116 aa10.01□□□□□ -0.81
CDK9-204ENST00000491521 GDF5OSQ5U4N7 250 aa10.01□□□□□ -0.81
CDK9-204ENST00000491521 UQCC3Q6UW78 93 aa10.01□□□□□ -0.81
CDK9-204ENST00000491521 PRNTQ86SH4 94 aa10.01□□□□□ -0.81
CDK9-204ENST00000491521 SLC7A5P1Q8MH63 180 aa10.01□□□□□ -0.81
CDK9-204ENST00000491521 AGPAT4-IT1Q9H0P7 198 aa10.01□□□□□ -0.81
CDK9-204ENST00000491521 SLC35B3Q9H1N7 401 aa10.01□□□□□ -0.81
CDK9-204ENST00000491521 EPPK1P58107 5090 aaKnown RBP10.01□□□□□ -0.81
CDK9-204ENST00000491521 TRAV8-1A0A0A6YYK1 113 aa10□□□□□ -0.81
CDK9-204ENST00000491521 RBAKDNA6NC62 111 aa10□□□□□ -0.81
CDK9-204ENST00000491521 S100A9P06702 114 aaKnown RBP10□□□□□ -0.81
CDK9-204ENST00000491521 C11orf52Q96A22 123 aa10□□□□□ -0.81
CDK9-204ENST00000491521 FMC1Q96HJ9 113 aa10□□□□□ -0.81
CDK9-204ENST00000491521 LINC00477Q96M19 166 aa10□□□□□ -0.81
CDK9-204ENST00000491521 PSG8Q9UQ74 426 aa10□□□□□ -0.81
CDK9-204ENST00000491521 CXorf65A6NEN9 183 aa9.99□□□□□ -0.81
CDK9-204ENST00000491521 NPIPB6E9PJ23 425 aa9.99□□□□□ -0.81
CDK9-204ENST00000491521 H3BMM0 161 aa9.99□□□□□ -0.81
CDK9-204ENST00000491521 NDUFS6O75380 124 aaKnown RBP9.99□□□□□ -0.81
CDK9-204ENST00000491521 HLA-DRB4P13762 266 aa9.99□□□□□ -0.81
CDK9-204ENST00000491521 RPL35P42766 123 aaKnown RBP9.99□□□□□ -0.81
CDK9-204ENST00000491521 ZNF138P52744 262 aa9.99□□□□□ -0.81
CDK9-204ENST00000491521 FLI1Q01543 452 aaPredicted RBP9.99□□□□□ -0.81
CDK9-204ENST00000491521 C9orf47Q6ZRZ4 202 aa9.99□□□□□ -0.81
CDK9-204ENST00000491521 EIF4E3Q8N5X7 224 aaKnown RBP9.99□□□□□ -0.81
CDK9-204ENST00000491521 TMEM75Q8N9X5 138 aa9.99□□□□□ -0.81
CDK9-204ENST00000491521 C2CD4CQ8TF44 421 aa9.99□□□□□ -0.81
CDK9-204ENST00000491521 DERL1Q9BUN8 251 aa9.99□□□□□ -0.81
CDK9-204ENST00000491521 HLA-DRB4X5D2U9 266 aa9.99□□□□□ -0.81
CDK9-204ENST00000491521 FBLL1A6NHQ2 334 aaKnown RBP9.98□□□□□ -0.81
CDK9-204ENST00000491521 ZNF727A8MUV8 499 aa9.98□□□□□ -0.81
CDK9-204ENST00000491521 UBE2CO00762 179 aa9.98□□□□□ -0.81
CDK9-204ENST00000491521 SFTA3P0C7M3 94 aa9.98□□□□□ -0.81
CDK9-204ENST00000491521 CT45A10P0DMU9 189 aa9.98□□□□□ -0.81
CDK9-204ENST00000491521 TAS2R60P59551 318 aa9.98□□□□□ -0.81
CDK9-204ENST00000491521 TMEM183BQ1AE95 376 aa9.98□□□□□ -0.81
CDK9-204ENST00000491521 SOHLH1Q5JUK2 328 aa9.98□□□□□ -0.81
CDK9-204ENST00000491521 Q6ZWC4 215 aa9.98□□□□□ -0.81
CDK9-204ENST00000491521 Q8TAT8 98 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 184.1 ms