RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 V9GYH0 126 aa13.99□□□□□ -0.17
CLIP2-208ENST00000491075 NOL3O60936 208 aaKnown RBP13.98□□□□□ -0.17
CLIP2-208ENST00000491075 EVI2AP22794 236 aa13.98□□□□□ -0.17
CLIP2-208ENST00000491075 CAMLGP49069 296 aa13.98□□□□□ -0.17
CLIP2-208ENST00000491075 RAB31Q13636 194 aa13.98□□□□□ -0.17
CLIP2-208ENST00000491075 IAH1Q2TAA2 248 aaPredicted RBP13.98□□□□□ -0.17
CLIP2-208ENST00000491075 FAM19A4Q96LR4 140 aa13.98□□□□□ -0.17
CLIP2-208ENST00000491075 LINC00477Q96M19 166 aa13.98□□□□□ -0.17
CLIP2-208ENST00000491075 TRAV5A0A0B4J249 113 aa13.97□□□□□ -0.17
CLIP2-208ENST00000491075 M0R3E3 92 aa13.97□□□□□ -0.17
CLIP2-208ENST00000491075 RNASE4P34096 147 aaKnown RBP13.97□□□□□ -0.17
CLIP2-208ENST00000491075 ERCC8Q13216 396 aa13.97□□□□□ -0.17
CLIP2-208ENST00000491075 OR1L4Q8NGR5 311 aa13.97□□□□□ -0.17
CLIP2-208ENST00000491075 C8orf49Q96NF6 230 aa13.97□□□□□ -0.17
CLIP2-208ENST00000491075 PFDN5Q99471 154 aa13.97□□□□□ -0.17
CLIP2-208ENST00000491075 TMEM70Q9BUB7 260 aa13.97□□□□□ -0.17
CLIP2-208ENST00000491075 MRPL16Q9NX20 251 aaKnown RBP13.97□□□□□ -0.17
CLIP2-208ENST00000491075 PRELID1Q9Y255 219 aa13.97□□□□□ -0.17
CLIP2-208ENST00000491075 TRBV19A0A075B6N1 114 aa13.96□□□□□ -0.17
CLIP2-208ENST00000491075 J3QL48 77 aa13.96□□□□□ -0.17
CLIP2-208ENST00000491075 PRAF2O60831 178 aa13.96□□□□□ -0.17
CLIP2-208ENST00000491075 GPX1P07203 203 aa13.96□□□□□ -0.17
CLIP2-208ENST00000491075 CRISP2P16562 243 aa13.96□□□□□ -0.17
CLIP2-208ENST00000491075 FHL2Q14192 279 aa13.96□□□□□ -0.17
CLIP2-208ENST00000491075 WFDC10BQ8IUB3 73 aa13.96□□□□□ -0.17
CLIP2-208ENST00000491075 C7orf66A4D0T2 115 aa13.95□□□□□ -0.18
CLIP2-208ENST00000491075 H3BMQ9 156 aa13.95□□□□□ -0.18
CLIP2-208ENST00000491075 RGS13O14921 159 aa13.95□□□□□ -0.18
CLIP2-208ENST00000491075 NDUFB6O95139 128 aa13.95□□□□□ -0.18
CLIP2-208ENST00000491075 NMBP08949 121 aa13.95□□□□□ -0.18
CLIP2-208ENST00000491075 HAMPP81172 84 aa13.95□□□□□ -0.18
CLIP2-208ENST00000491075 NRARPQ7Z6K4 114 aa13.95□□□□□ -0.18
CLIP2-208ENST00000491075 ARPC5LQ9BPX5 153 aa13.95□□□□□ -0.18
CLIP2-208ENST00000491075 AGPAT4-IT1Q9H0P7 198 aa13.95□□□□□ -0.18
CLIP2-208ENST00000491075 SRIP30626 198 aa13.94□□□□□ -0.18
CLIP2-208ENST00000491075 PDE6HQ13956 83 aa13.94□□□□□ -0.18
CLIP2-208ENST00000491075 MIC13Q5XKP0 118 aa13.94□□□□□ -0.18
CLIP2-208ENST00000491075 C10orf126Q8N4M7 172 aa13.94□□□□□ -0.18
CLIP2-208ENST00000491075 C12orf45Q8N5I9 185 aaPredicted RBP13.94□□□□□ -0.18
CLIP2-208ENST00000491075 MRPL32Q9BYC8 188 aaKnown RBP13.94□□□□□ -0.18
CLIP2-208ENST00000491075 GSKIPQ9P0R6 139 aa13.94□□□□□ -0.18
CLIP2-208ENST00000491075 TP53TG3Q9ULZ0 132 aa13.94□□□□□ -0.18
CLIP2-208ENST00000491075 IGHV1OR15-1A0A075B7D0 117 aa13.93□□□□□ -0.18
CLIP2-208ENST00000491075 IGLV5-52A0A0A0MRZ9 124 aa13.93□□□□□ -0.18
CLIP2-208ENST00000491075 K7EQD1 137 aa13.93□□□□□ -0.18
CLIP2-208ENST00000491075 ZNF415Q09FC8 603 aa13.93□□□□□ -0.18
CLIP2-208ENST00000491075 C9orf47Q6ZRZ4 202 aa13.93□□□□□ -0.18
CLIP2-208ENST00000491075 NTN5Q8WTR8 489 aaPredicted RBP13.93□□□□□ -0.18
CLIP2-208ENST00000491075 PCNPQ8WW12 178 aaKnown RBP13.93□□□□□ -0.18
CLIP2-208ENST00000491075 TRGV4A0A0C4DH28 118 aa13.92□□□□□ -0.18
CLIP2-208ENST00000491075 NDUFB4O95168 129 aa13.92□□□□□ -0.18
CLIP2-208ENST00000491075 MBPP02686 304 aaPredicted RBP13.92□□□□□ -0.18
CLIP2-208ENST00000491075 ZFAND2AQ8N6M9 145 aa13.92□□□□□ -0.18
CLIP2-208ENST00000491075 TMEM14CQ9P0S9 112 aa13.92□□□□□ -0.18
CLIP2-208ENST00000491075 FLVCR2Q9UPI3 526 aa13.92□□□□□ -0.18
CLIP2-208ENST00000491075 TIMM9Q9Y5J7 89 aa13.92□□□□□ -0.18
CLIP2-208ENST00000491075 NAP1L6A6NFF2 107 aa13.91□□□□□ -0.18
CLIP2-208ENST00000491075 E5RGE8 158 aa13.91□□□□□ -0.18
CLIP2-208ENST00000491075 L7N2F9 121 aa13.91□□□□□ -0.18
CLIP2-208ENST00000491075 CRYGDP07320 174 aa13.91□□□□□ -0.18
CLIP2-208ENST00000491075 HIST1H1EP10412 219 aaKnown RBP13.91□□□□□ -0.18
CLIP2-208ENST00000491075 S100A5P33763 92 aa13.91□□□□□ -0.18
CLIP2-208ENST00000491075 VAMP2P63027 116 aa13.91□□□□□ -0.18
CLIP2-208ENST00000491075 TMEM78Q5T7P6 136 aa13.91□□□□□ -0.18
CLIP2-208ENST00000491075 PRR9Q5T870 116 aa13.91□□□□□ -0.18
CLIP2-208ENST00000491075 IQCF2Q8IXL9 164 aa13.91□□□□□ -0.18
CLIP2-208ENST00000491075 SRRQ9GZT4 340 aa13.91□□□□□ -0.18
CLIP2-208ENST00000491075 AAMDCQ9H7C9 122 aa13.91□□□□□ -0.18
CLIP2-208ENST00000491075 SLC39A9Q9NUM3 307 aa13.91□□□□□ -0.18
CLIP2-208ENST00000491075 UQCC1Q9NVA1 299 aa13.91□□□□□ -0.18
CLIP2-208ENST00000491075 WDR83OSQ9Y284 106 aa13.91□□□□□ -0.18
CLIP2-208ENST00000491075 PSCAO43653 123 aa13.9□□□□□ -0.18
CLIP2-208ENST00000491075 ORM1P02763 201 aa13.9□□□□□ -0.18
CLIP2-208ENST00000491075 RPL29P47914 159 aaKnown RBP13.9□□□□□ -0.18
CLIP2-208ENST00000491075 IGKV2-40A0A087WW87 121 aaPredicted RBP13.89□□□□□ -0.19
CLIP2-208ENST00000491075 IGKV2D-40P01614 121 aaPredicted RBP13.89□□□□□ -0.19
CLIP2-208ENST00000491075 GYPEP15421 78 aa13.89□□□□□ -0.19
CLIP2-208ENST00000491075 EXOC3-AS1Q8N2X6 119 aa13.89□□□□□ -0.19
CLIP2-208ENST00000491075 TXNDC17Q9BRA2 123 aa13.89□□□□□ -0.19
CLIP2-208ENST00000491075 LRCOL1A6NCL2 159 aa13.88□□□□□ -0.19
CLIP2-208ENST00000491075 CST7O76096 145 aa13.88□□□□□ -0.19
CLIP2-208ENST00000491075 INPP1P49441 399 aa13.88□□□□□ -0.19
CLIP2-208ENST00000491075 BCAP31P51572 246 aa13.88□□□□□ -0.19
CLIP2-208ENST00000491075 Q6ZQT7 251 aa13.88□□□□□ -0.19
CLIP2-208ENST00000491075 OR10G4Q8NGN3 311 aa13.88□□□□□ -0.19
CLIP2-208ENST00000491075 BLNKQ8WV28 456 aa13.88□□□□□ -0.19
CLIP2-208ENST00000491075 MITD1Q8WV92 249 aa13.88□□□□□ -0.19
CLIP2-208ENST00000491075 C20orf85Q9H1P6 137 aa13.88□□□□□ -0.19
CLIP2-208ENST00000491075 SFTA3P0C7M3 94 aa13.87□□□□□ -0.19
CLIP2-208ENST00000491075 PYYP10082 97 aa13.87□□□□□ -0.19
CLIP2-208ENST00000491075 CAV2P51636 162 aa13.87□□□□□ -0.19
CLIP2-208ENST00000491075 BAXQ07812 192 aa13.87□□□□□ -0.19
CLIP2-208ENST00000491075 VWC2Q2TAL6 325 aa13.87□□□□□ -0.19
CLIP2-208ENST00000491075 ZNF479Q96JC4 524 aa13.87□□□□□ -0.19
CLIP2-208ENST00000491075 ZNF492Q9P255 531 aa13.87□□□□□ -0.19
CLIP2-208ENST00000491075 UBE2L5PA0A1B0GUS4 154 aa13.86□□□□□ -0.19
CLIP2-208ENST00000491075 C9JCJ5 164 aa13.86□□□□□ -0.19
CLIP2-208ENST00000491075 ZNF846Q147U1 533 aa13.86□□□□□ -0.19
CLIP2-208ENST00000491075 LSM5Q9Y4Y9 91 aaKnown RBP13.86□□□□□ -0.19
CLIP2-208ENST00000491075 TRBV7-9A0A0J9YWB2 115 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms