RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 PROSCO94903 275 aa2.24□□□□□ -2.05
HMGB1P38-201ENST00000490557 TNFP01375 233 aa2.24□□□□□ -2.05
HMGB1P38-201ENST00000490557 CD2P06729 351 aa2.24□□□□□ -2.05
HMGB1P38-201ENST00000490557 CD14P08571 375 aa2.24□□□□□ -2.05
HMGB1P38-201ENST00000490557 CCL4P13236 92 aa2.24□□□□□ -2.05
HMGB1P38-201ENST00000490557 HINT1P49773 126 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P38-201ENST00000490557 HSD52Q0P140 79 aa2.24□□□□□ -2.05
HMGB1P38-201ENST00000490557 NCMAPQ5T1S8 102 aa2.24□□□□□ -2.05
HMGB1P38-201ENST00000490557 Q6ZUT4 128 aa2.24□□□□□ -2.05
HMGB1P38-201ENST00000490557 GKN2Q86XP6 184 aa2.24□□□□□ -2.05
HMGB1P38-201ENST00000490557 CMTM2Q8TAZ6 248 aa2.24□□□□□ -2.05
HMGB1P38-201ENST00000490557 HYLS1Q96M11 299 aa2.24□□□□□ -2.05
HMGB1P38-201ENST00000490557 SEC11CQ9BY50 192 aa2.24□□□□□ -2.05
HMGB1P38-201ENST00000490557 CXCL16Q9H2A7 254 aa2.24□□□□□ -2.05
HMGB1P38-201ENST00000490557 RPL26L1Q9UNX3 145 aaKnown RBP2.24□□□□□ -2.05
HMGB1P38-201ENST00000490557 R4GN34 69 aa2.24□□□□□ -2.05
HMGB1P38-201ENST00000490557 PHLPP1O60346 1717 aa2.24□□□□□ -2.05
HMGB1P38-201ENST00000490557 TRPM3Q9HCF6 1732 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P38-201ENST00000490557 ANKRD31Q8N7Z5 1873 aa2.24□□□□□ -2.05
HMGB1P38-201ENST00000490557 N4BP2Q86UW6 1770 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P38-201ENST00000490557 SCN8AQ9UQD0 1980 aa2.23□□□□□ -2.05
HMGB1P38-201ENST00000490557 COL1A1P02452 1464 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P38-201ENST00000490557 IGKV1D-42A0A075B6H8 117 aa2.23□□□□□ -2.05
HMGB1P38-201ENST00000490557 HYPMO75409 117 aa2.23□□□□□ -2.05
HMGB1P38-201ENST00000490557 KLF7O75840 302 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P38-201ENST00000490557 CRPP02741 224 aa2.23□□□□□ -2.05
HMGB1P38-201ENST00000490557 BAALC-AS2P0C853 105 aa2.23□□□□□ -2.05
HMGB1P38-201ENST00000490557 HRES1P13985 223 aa2.23□□□□□ -2.05
HMGB1P38-201ENST00000490557 ERHP84090 104 aaKnown RBP2.23□□□□□ -2.05
HMGB1P38-201ENST00000490557 ZNF345Q14585 488 aa2.23□□□□□ -2.05
HMGB1P38-201ENST00000490557 HCP5Q6MZN7 132 aa2.23□□□□□ -2.05
HMGB1P38-201ENST00000490557 MRPL54Q6P161 138 aaKnown RBP2.23□□□□□ -2.05
HMGB1P38-201ENST00000490557 OTOSQ8NHW6 89 aa2.23□□□□□ -2.05
HMGB1P38-201ENST00000490557 NABP2Q9BQ15 211 aa2.23□□□□□ -2.05
HMGB1P38-201ENST00000490557 AGPAT4-IT1Q9H0P7 198 aa2.23□□□□□ -2.05
HMGB1P38-201ENST00000490557 CST11Q9H112 138 aa2.23□□□□□ -2.05
HMGB1P38-201ENST00000490557 NISCHQ9Y2I1 1504 aa2.22□□□□□ -2.05
HMGB1P38-201ENST00000490557 NUP98P52948 1817 aa2.22□□□□□ -2.05
HMGB1P38-201ENST00000490557 MYOM2P54296 1465 aa2.22□□□□□ -2.05
HMGB1P38-201ENST00000490557 TRPM1Q7Z4N2 1603 aa2.22□□□□□ -2.05
HMGB1P38-201ENST00000490557 TRAV1-1A0A0B4J248 108 aa2.22□□□□□ -2.05
HMGB1P38-201ENST00000490557 ZNF705FA8MVS1 300 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P38-201ENST00000490557 M0R2P5 195 aa2.22□□□□□ -2.05
HMGB1P38-201ENST00000490557 CATR1Q13166 79 aa2.22□□□□□ -2.05
HMGB1P38-201ENST00000490557 ASB16-AS1Q495Z4 193 aa2.22□□□□□ -2.05
HMGB1P38-201ENST00000490557 Q56UQ5 140 aa2.22□□□□□ -2.05
HMGB1P38-201ENST00000490557 COL5A1-AS1Q5SY13 56 aa2.22□□□□□ -2.05
HMGB1P38-201ENST00000490557 ZNF826PQ6ZT77 177 aa2.22□□□□□ -2.05
HMGB1P38-201ENST00000490557 SVBPQ8N300 66 aa2.22□□□□□ -2.05
HMGB1P38-201ENST00000490557 Q8N814 137 aa2.22□□□□□ -2.05
HMGB1P38-201ENST00000490557 OR8B3Q8NGG8 313 aa2.22□□□□□ -2.05
HMGB1P38-201ENST00000490557 PSMF1Q92530 271 aa2.22□□□□□ -2.05
HMGB1P38-201ENST00000490557 NDUFB11Q9NX14 153 aa2.22□□□□□ -2.05
HMGB1P38-201ENST00000490557 TAS2R8Q9NYW2 309 aa2.22□□□□□ -2.05
HMGB1P38-201ENST00000490557 ZNF609O15014 1411 aa2.22□□□□□ -2.05
HMGB1P38-201ENST00000490557 KTN1Q86UP2 1357 aaKnown RBP2.22□□□□□ -2.05
HMGB1P38-201ENST00000490557 SCAF11Q99590 1463 aaKnown RBP2.21□□□□□ -2.06
HMGB1P38-201ENST00000490557 IGKV2D-26A0A0A0MRZ7 120 aa2.21□□□□□ -2.06
HMGB1P38-201ENST00000490557 IGHV1-24A0A0C4DH33 117 aa2.21□□□□□ -2.06
HMGB1P38-201ENST00000490557 APOC4-APOC2K7ER74 178 aa2.21□□□□□ -2.06
HMGB1P38-201ENST00000490557 APOC2P02655 101 aa2.21□□□□□ -2.06
HMGB1P38-201ENST00000490557 KRTAP12-3P60328 96 aa2.21□□□□□ -2.06
HMGB1P38-201ENST00000490557 ROMO1P60602 79 aa2.21□□□□□ -2.06
HMGB1P38-201ENST00000490557 S100A10P60903 97 aa2.21□□□□□ -2.06
HMGB1P38-201ENST00000490557 ZNF846Q147U1 533 aa2.21□□□□□ -2.06
HMGB1P38-201ENST00000490557 Q8N2B8 174 aa2.21□□□□□ -2.06
HMGB1P38-201ENST00000490557 OR4X2Q8NGF9 303 aa2.21□□□□□ -2.06
HMGB1P38-201ENST00000490557 SFT2D1Q8WV19 159 aa2.21□□□□□ -2.06
HMGB1P38-201ENST00000490557 SLC50A1Q9BRV3 221 aa2.21□□□□□ -2.06
HMGB1P38-201ENST00000490557 RPRMQ9NS64 109 aa2.21□□□□□ -2.06
HMGB1P38-201ENST00000490557 CHCHD2Q9Y6H1 151 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P38-201ENST00000490557 MYH7P12883 1935 aa2.21□□□□□ -2.06
HMGB1P38-201ENST00000490557 A2ML1A8K2U0 1454 aa2.2□□□□□ -2.06
HMGB1P38-201ENST00000490557 PZPP20742 1482 aa2.2□□□□□ -2.06
HMGB1P38-201ENST00000490557 HEATR5AQ86XA9 2040 aa2.2□□□□□ -2.06
HMGB1P38-201ENST00000490557 NYNRINQ9P2P1 1898 aaKnown RBP2.2□□□□□ -2.06
HMGB1P38-201ENST00000490557 FRMPD1Q5SYB0 1578 aa2.2□□□□□ -2.06
HMGB1P38-201ENST00000490557 SCN9AQ15858 1988 aa2.2□□□□□ -2.06
HMGB1P38-201ENST00000490557 FOCADQ5VW36 1801 aa2.2□□□□□ -2.06
HMGB1P38-201ENST00000490557 TMSB15BA0A087X1C1 80 aa2.2□□□□□ -2.06
HMGB1P38-201ENST00000490557 LOC107984156A0A0G2JMH3 177 aa2.2□□□□□ -2.06
HMGB1P38-201ENST00000490557 C3orf85A0A1B0GTC6 90 aa2.2□□□□□ -2.06
HMGB1P38-201ENST00000490557 G3V3Q6 166 aa2.2□□□□□ -2.06
HMGB1P38-201ENST00000490557 GEMIN2O14893 280 aaKnown RBP2.2□□□□□ -2.06
HMGB1P38-201ENST00000490557 UBL3O95164 117 aa2.2□□□□□ -2.06
HMGB1P38-201ENST00000490557 IGLV1-51P01701 117 aa2.2□□□□□ -2.06
HMGB1P38-201ENST00000490557 C1orf134Q5TEV5 83 aa2.2□□□□□ -2.06
HMGB1P38-201ENST00000490557 MIC13Q5XKP0 118 aa2.2□□□□□ -2.06
HMGB1P38-201ENST00000490557 ATP11AUNQ6ZP68 121 aa2.2□□□□□ -2.06
HMGB1P38-201ENST00000490557 ARL17AQ8IVW1 177 aa2.2□□□□□ -2.06
HMGB1P38-201ENST00000490557 ATP6V0E2Q8NHE4 81 aa2.2□□□□□ -2.06
HMGB1P38-201ENST00000490557 TMEM254Q8TBM7 123 aa2.2□□□□□ -2.06
HMGB1P38-201ENST00000490557 MUCL1Q96DR8 90 aa2.2□□□□□ -2.06
HMGB1P38-201ENST00000490557 Q96M85 177 aa2.2□□□□□ -2.06
HMGB1P38-201ENST00000490557 C20orf166-AS1Q96NR2 134 aa2.2□□□□□ -2.06
HMGB1P38-201ENST00000490557 SMIM7Q9BQ49 75 aa2.2□□□□□ -2.06
HMGB1P38-201ENST00000490557 PSORS1C2Q9UIG4 136 aa2.2□□□□□ -2.06
HMGB1P38-201ENST00000490557 NOP16Q9Y3C1 178 aaKnown RBP2.2□□□□□ -2.06
HMGB1P38-201ENST00000490557 SERP1Q9Y6X1 66 aa2.2□□□□□ -2.06
HMGB1P38-201ENST00000490557 LCTP09848 1927 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms