RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 B9D2Q9BPU9 175 aa11.82□□□□□ -0.52
PCCB-218ENST00000490504 SLC50A1Q9BRV3 221 aa11.82□□□□□ -0.52
PCCB-218ENST00000490504 MLXQ9UH92 298 aa11.82□□□□□ -0.52
PCCB-218ENST00000490504 A0A1W2PS18 150 aa11.81□□□□□ -0.52
PCCB-218ENST00000490504 M0R3E3 92 aa11.81□□□□□ -0.52
PCCB-218ENST00000490504 INSL3P51460 131 aa11.81□□□□□ -0.52
PCCB-218ENST00000490504 PYGO2Q9BRQ0 406 aa11.81□□□□□ -0.52
PCCB-218ENST00000490504 MLST8Q9BVC4 326 aa11.81□□□□□ -0.52
PCCB-218ENST00000490504 RNASE7Q9H1E1 156 aaKnown RBP11.81□□□□□ -0.52
PCCB-218ENST00000490504 DAZ1Q9NQZ3 744 aaKnown RBP11.81□□□□□ -0.52
PCCB-218ENST00000490504 V9GYV3 84 aa11.81□□□□□ -0.52
PCCB-218ENST00000490504 TRAV8-1A0A0A6YYK1 113 aa11.8□□□□□ -0.52
PCCB-218ENST00000490504 C1orf196B1AJZ1 125 aa11.8□□□□□ -0.52
PCCB-218ENST00000490504 K7EMT4 169 aa11.8□□□□□ -0.52
PCCB-218ENST00000490504 SAP30O75446 220 aa11.8□□□□□ -0.52
PCCB-218ENST00000490504 IGLV2-11P01706 119 aa11.8□□□□□ -0.52
PCCB-218ENST00000490504 RPS10P46783 165 aaKnown RBP11.8□□□□□ -0.52
PCCB-218ENST00000490504 PSG3Q16557 428 aa11.8□□□□□ -0.52
PCCB-218ENST00000490504 RPEL1Q2QD12 228 aa11.8□□□□□ -0.52
PCCB-218ENST00000490504 IBA57Q5T440 356 aaKnown RBP11.8□□□□□ -0.52
PCCB-218ENST00000490504 FAM231DQ6ZW35 169 aa11.8□□□□□ -0.52
PCCB-218ENST00000490504 BIN3Q9NQY0 253 aa11.8□□□□□ -0.52
PCCB-218ENST00000490504 IL36BQ9NZH7 164 aa11.8□□□□□ -0.52
PCCB-218ENST00000490504 ZNF256Q9Y2P7 627 aaPredicted RBP11.8□□□□□ -0.52
PCCB-218ENST00000490504 COL7A1Q02388 2944 aa11.8□□□□□ -0.52
PCCB-218ENST00000490504 IGHV7-4-1A0A0J9YVY3 117 aa11.79□□□□□ -0.52
PCCB-218ENST00000490504 FLI1Q01543 452 aaPredicted RBP11.79□□□□□ -0.52
PCCB-218ENST00000490504 PRNTQ86SH4 94 aa11.79□□□□□ -0.52
PCCB-218ENST00000490504 BTF3L4Q96K17 158 aa11.79□□□□□ -0.52
PCCB-218ENST00000490504 UFC1Q9Y3C8 167 aa11.79□□□□□ -0.52
PCCB-218ENST00000490504 A0A1W2PPQ1 181 aa11.78□□□□□ -0.52
PCCB-218ENST00000490504 FBLL1A6NHQ2 334 aaKnown RBP11.78□□□□□ -0.52
PCCB-218ENST00000490504 RAB5BP61020 215 aa11.78□□□□□ -0.52
PCCB-218ENST00000490504 TM4SF20Q53R12 229 aa11.78□□□□□ -0.52
PCCB-218ENST00000490504 TMEM183AQ8IXX5 376 aa11.78□□□□□ -0.52
PCCB-218ENST00000490504 PSG8Q9UQ74 426 aa11.78□□□□□ -0.52
PCCB-218ENST00000490504 ZFP30Q9Y2G7 519 aa11.78□□□□□ -0.52
PCCB-218ENST00000490504 CHEK1O14757 476 aa11.78□□□□□ -0.52
PCCB-218ENST00000490504 FAM3BP58499 235 aaPredicted RBP11.78□□□□□ -0.52
PCCB-218ENST00000490504 ZNF492Q9P255 531 aa11.78□□□□□ -0.52
PCCB-218ENST00000490504 HUWE1Q7Z6Z7 4374 aaKnown RBP11.77□□□□□ -0.53
PCCB-218ENST00000490504 TRAV9-1A0A075B6T8 112 aa11.77□□□□□ -0.53
PCCB-218ENST00000490504 HLA-DMBP28068 263 aa11.77□□□□□ -0.53
PCCB-218ENST00000490504 BMI1P35226 326 aa11.77□□□□□ -0.53
PCCB-218ENST00000490504 IGFL4Q6B9Z1 124 aa11.77□□□□□ -0.53
PCCB-218ENST00000490504 PRR27Q6MZM9 219 aa11.77□□□□□ -0.53
PCCB-218ENST00000490504 MRPL53Q96EL3 112 aaKnown RBP11.77□□□□□ -0.53
PCCB-218ENST00000490504 RHPN1-AS1Q9BWJ2 59 aa11.77□□□□□ -0.53
PCCB-218ENST00000490504 CLEC5AQ9NY25 188 aa11.77□□□□□ -0.53
PCCB-218ENST00000490504 SMPXQ9UHP9 88 aa11.77□□□□□ -0.53
PCCB-218ENST00000490504 IGKV2-40A0A087WW87 121 aaPredicted RBP11.76□□□□□ -0.53
PCCB-218ENST00000490504 ZNF705GA8MUZ8 300 aaPredicted RBP11.76□□□□□ -0.53
PCCB-218ENST00000490504 GATCO43716 136 aaKnown RBP11.76□□□□□ -0.53
PCCB-218ENST00000490504 IGKV2D-40P01614 121 aaPredicted RBP11.76□□□□□ -0.53
PCCB-218ENST00000490504 LCN12Q6JVE5 192 aa11.76□□□□□ -0.53
PCCB-218ENST00000490504 TRAV8-2A0A0B4J237 113 aa11.75□□□□□ -0.53
PCCB-218ENST00000490504 A8MWP6 167 aa11.75□□□□□ -0.53
PCCB-218ENST00000490504 LGALS9O00182 355 aa11.75□□□□□ -0.53
PCCB-218ENST00000490504 TYMSP04818 313 aa11.75□□□□□ -0.53
PCCB-218ENST00000490504 KLF5Q13887 457 aaPredicted RBP11.75□□□□□ -0.53
PCCB-218ENST00000490504 ZFP82Q8N141 532 aa11.75□□□□□ -0.53
PCCB-218ENST00000490504 NUDT10Q8NFP7 164 aa11.75□□□□□ -0.53
PCCB-218ENST00000490504 NUDT11Q96G61 164 aa11.75□□□□□ -0.53
PCCB-218ENST00000490504 C16orf92Q96LL3 132 aa11.75□□□□□ -0.53
PCCB-218ENST00000490504 SRD5A3Q9H8P0 318 aa11.75□□□□□ -0.53
PCCB-218ENST00000490504 ZNF705FA8MVS1 300 aaPredicted RBP11.75□□□□□ -0.53
PCCB-218ENST00000490504 GBGT1Q8N5D6 347 aa11.75□□□□□ -0.53
PCCB-218ENST00000490504 RNF182Q8N6D2 247 aa11.75□□□□□ -0.53
PCCB-218ENST00000490504 LOC105371267A0A1B0GV96 52 aa11.74□□□□□ -0.53
PCCB-218ENST00000490504 TMEM213A2RRL7 107 aa11.74□□□□□ -0.53
PCCB-218ENST00000490504 RBAKDNA6NC62 111 aa11.74□□□□□ -0.53
PCCB-218ENST00000490504 C19orf71A6NCJ1 209 aa11.74□□□□□ -0.53
PCCB-218ENST00000490504 PRB4P10163 310 aaPredicted RBP11.74□□□□□ -0.53
PCCB-218ENST00000490504 DAZAP1Q96EP5 407 aaKnown RBP11.74□□□□□ -0.53
PCCB-218ENST00000490504 ASCL2Q99929 193 aa11.74□□□□□ -0.53
PCCB-218ENST00000490504 SMIM27A0A1W2PRY6 76 aa11.73□□□□□ -0.53
PCCB-218ENST00000490504 SYNJ2BPP57105 145 aa11.73□□□□□ -0.53
PCCB-218ENST00000490504 VGLL1Q99990 258 aa11.73□□□□□ -0.53
PCCB-218ENST00000490504 NRN1Q9NPD7 142 aa11.73□□□□□ -0.53
PCCB-218ENST00000490504 PRAC2D3DTV9 90 aa11.72□□□□□ -0.53
PCCB-218ENST00000490504 SOCS3O14543 225 aa11.72□□□□□ -0.53
PCCB-218ENST00000490504 P01737 135 aa11.72□□□□□ -0.53
PCCB-218ENST00000490504 RPL11P62913 178 aaKnown RBP11.72□□□□□ -0.53
PCCB-218ENST00000490504 CT83Q5H943 113 aa11.72□□□□□ -0.53
PCCB-218ENST00000490504 SAPCD1Q5SSQ6 148 aa11.72□□□□□ -0.53
PCCB-218ENST00000490504 LINC00322Q6ZN03 302 aaPredicted RBP11.72□□□□□ -0.53
PCCB-218ENST00000490504 ZC2HC1AQ96GY0 325 aa11.72□□□□□ -0.53
PCCB-218ENST00000490504 RPP21Q9H633 154 aaKnown RBP11.72□□□□□ -0.53
PCCB-218ENST00000490504 IGLV1-51P01701 117 aa11.71□□□□□ -0.53
PCCB-218ENST00000490504 TRGC2P03986 189 aa11.71□□□□□ -0.53
PCCB-218ENST00000490504 NHLRC4P0CG21 123 aaPredicted RBP11.71□□□□□ -0.53
PCCB-218ENST00000490504 EDN2P20800 178 aa11.71□□□□□ -0.53
PCCB-218ENST00000490504 SAMD13Q5VXD3 122 aa11.71□□□□□ -0.53
PCCB-218ENST00000490504 TCF24Q7RTU0 167 aa11.71□□□□□ -0.53
PCCB-218ENST00000490504 COX8CQ7Z4L0 72 aa11.71□□□□□ -0.53
PCCB-218ENST00000490504 OR4B1Q8NGF8 309 aa11.71□□□□□ -0.53
PCCB-218ENST00000490504 OR9G4Q8NGQ1 327 aa11.71□□□□□ -0.53
PCCB-218ENST00000490504 CA1P00915 261 aaPredicted RBP11.71□□□□□ -0.54
PCCB-218ENST00000490504 CT45A10P0DMU9 189 aa11.71□□□□□ -0.54
PCCB-218ENST00000490504 TCL1AP56279 114 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms